Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a12
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031242-1|AAH31242.1|  446|Homo sapiens coiled-coil domain cont...    30   6.8  
AJ580807-1|CAE45342.1|  529|Homo sapiens mutated in bladder canc...    30   6.8  
AF169796-1|AAF80856.1|  484|Homo sapiens zinc finger DNA binding...    30   6.8  

>BC031242-1|AAH31242.1|  446|Homo sapiens coiled-coil domain
           containing 112 protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 150 ISKMSTKYHKNCTKDPNELEDPTRKQPDEQLTRKLKPLTTKPL 278
           ++K+  K   N ++DP+ L  PT+    E+ T+K+ P  + PL
Sbjct: 387 LAKLKEKVENNVSRDPSRLYKPTKGW--EERTKKIGPTGSGPL 427


>AJ580807-1|CAE45342.1|  529|Homo sapiens mutated in bladder cancer
           1 protein.
          Length = 529

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 150 ISKMSTKYHKNCTKDPNELEDPTRKQPDEQLTRKLKPLTTKPL 278
           ++K+  K   N ++DP+ L  PT+    E+ T+K+ P  + PL
Sbjct: 470 LAKLKEKVENNVSRDPSRLYKPTKGW--EERTKKIGPTGSGPL 510


>AF169796-1|AAF80856.1|  484|Homo sapiens zinc finger DNA binding
           protein protein.
          Length = 484

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 21/85 (24%), Positives = 32/85 (37%)
 Frame = +3

Query: 153 SKMSTKYHKNCTKDPNELEDPTRKQPDEQLTRKLKPLTTKPLCDCSNCTCKDCPDVLKTF 332
           SK S +   +      E        PD    ++ +PL+T  L   +   C  C   +   
Sbjct: 155 SKFSPQKEASPAAKTKETRSVEEIAPDPSEAKRPEPLSTSTLKQVTKVDCPVCGVNIPES 214

Query: 333 SINVTEDSCDFGTKKVEQIDESSHE 407
            IN   DSC    +K E +  S H+
Sbjct: 215 HINKHLDSCLSREEKKESLRSSVHK 239


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,742,689
Number of Sequences: 237096
Number of extensions: 1370113
Number of successful extensions: 3286
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3282
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)