Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a06
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.65 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   2.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.0  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   4.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.0  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 356 YSNIVWLERKQNPLSINCAK--PP 421
           Y N+ + +R+  PL I+C K  PP
Sbjct: 16  YGNVNYRQRRSQPLKISCLKTTPP 39


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 601 QCPHCNRRFNQGAA 642
           +CP C+RRF+Q ++
Sbjct: 51  RCPVCDRRFSQSSS 64


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 601 QCPHCNRRFNQGAA 642
           +CP C+RRF+Q ++
Sbjct: 307 RCPVCDRRFSQSSS 320


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 601 QCPHCNRRFNQGA-AERHI 654
           +C HC+R+F Q A   RH+
Sbjct: 39  RCEHCDRQFVQVANLRRHL 57


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 564 QIAQLTSSIQMCLHLFRRSYCLDELFVFLSPVAVQ 460
           +I  L  ++Q C HL      +DE    L+P+  Q
Sbjct: 44  EITDLEPALQYCTHLIYGYAAIDEETYKLTPLNEQ 78


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 601 QCPHCNRRFNQGA-AERHI 654
           +C HC+R+F Q A   RH+
Sbjct: 192 RCEHCDRQFVQVANLRRHL 210


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 14/56 (25%), Positives = 21/56 (37%)
 Frame = -2

Query: 682 C*TESLRTSECVARQRPG*TCDCNEDTARSPDSPTAEGAADRSAYLQHSNVPALVS 515
           C  ES   S C     P    DC+      PD   +         L+ +NVP +++
Sbjct: 134 CKDESDENS-CTVETDPNRALDCDPTQCVLPDCFCSADGTRIPGQLEPANVPQMIT 188


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 637 RPG*TCDCNEDTARSPD 587
           RPG   DCN++T+ S +
Sbjct: 204 RPGFDNDCNKNTSTSKE 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,688
Number of Sequences: 336
Number of extensions: 2958
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)