Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10a05
(614 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 92 5e-20
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 82 7e-17
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 58 8e-10
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 50 4e-07
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 44 1e-05
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 33 0.025
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 33 0.043
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 32 0.076
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 31 0.17
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 29 0.40
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 29 0.53
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.2
SPCC1020.03 |||mitochondrial iron ion transporter|Schizosaccharo... 27 2.8
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 26 3.8
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 25 8.7
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 92.3 bits (219), Expect = 5e-20
Identities = 48/144 (33%), Positives = 77/144 (53%)
Frame = +1
Query: 118 LTNAQEQDLREAFNLLDYTGEGKIRAEDFRVAIKALGYEPTNEELQTMIRAVDKGDTGKL 297
LT+ Q + REAF+L D +G I + + V +++LG PT ELQ MI VD G +
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 298 SFENFETAIMRKIMALDSDGDIMKSFRLFDDDDSGFINFENVKKVSQILGTYLTXXXXXX 477
F F T + RK+ D++ ++ ++F++FD D +G+I E + V LG L+
Sbjct: 66 DFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVAD 125
Query: 478 XXXXXXXXFDGLISVEEFMKMIKN 549
DG+I+ EEF ++I +
Sbjct: 126 MIREADTDGDGVINYEEFSRVISS 149
Score = 48.0 bits (109), Expect = 1e-06
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = +1
Query: 133 EQDLREAFNLLDYTGEGKIRAEDFRVAIKALGYEPTNEELQTMIRAVDKGDTGKLSFENF 312
E+++REAF + D G G I E+ + +LG + EE+ MIR D G +++E F
Sbjct: 84 EEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEF 143
Query: 313 ETAIMRK 333
I K
Sbjct: 144 SRVISSK 150
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 81.8 bits (193), Expect = 7e-17
Identities = 43/145 (29%), Positives = 75/145 (51%)
Frame = +1
Query: 109 KLTLTNAQEQDLREAFNLLDYTGEGKIRAEDFRVAIKALGYEPTNEELQTMIRAVDKGDT 288
++ +T Q QD+ EAF L D + I + R A++ALG+ E+ ++R DK
Sbjct: 28 RVEITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGK 87
Query: 289 GKLSFENFETAIMRKIMALDSDGDIMKSFRLFDDDDSGFINFENVKKVSQILGTYLTXXX 468
G L E+F + KI+ D +I ++F LFDDD++G I+ N+++V++ L +
Sbjct: 88 GYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQE 147
Query: 469 XXXXXXXXXXXFDGLISVEEFMKMI 543
DG I+ +EF+ ++
Sbjct: 148 LEAMIEEFDLDQDGEINEQEFIAIM 172
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 58.4 bits (135), Expect = 8e-10
Identities = 34/131 (25%), Positives = 66/131 (50%)
Frame = +1
Query: 55 SNSEEDLNQSSKVNEIKAKLTLTNAQEQDLREAFNLLDYTGEGKIRAEDFRVAIKALGYE 234
++S+ Q++K A LT++Q Q+L+EAF LLD G+G I ED + + +L +
Sbjct: 21 TSSQRVAAQAAKRASSGAFAQLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQD 80
Query: 235 PTNEELQTMIRAVDKGDTGKLSFENFETAIMRKIMALDSDGDIMKSFRLFDDDDSGFINF 414
+ + + M +++ ++ F TA+ + + D++++F FDD SG I
Sbjct: 81 ASEDSINHMFESINP----PINLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPI 136
Query: 415 ENVKKVSQILG 447
++ +G
Sbjct: 137 STMRDALSSMG 147
Score = 33.5 bits (73), Expect = 0.025
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +1
Query: 139 DLREAFNLLDYTGEGKIRAEDFRVAIKALGYEPTNEELQTMIRAVDKGDTGKLSFENFET 318
DL EAF+ D T GKI R A+ ++G +E+++++R+ G +E F
Sbjct: 118 DLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSYT--SHGVFYYEKFVD 175
Query: 319 AI 324
AI
Sbjct: 176 AI 177
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 49.6 bits (113), Expect = 4e-07
Identities = 30/110 (27%), Positives = 55/110 (50%)
Frame = +1
Query: 130 QEQDLREAFNLLDYTGEGKIRAEDFRVAIKALGYEPTNEELQTMIRAVDKGDTGKLSFEN 309
Q +++EAF L D +G I +++LG T+ EL + + GD + +
Sbjct: 7 QTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL--GDA--IDEKK 62
Query: 310 FETAIMRKIMALDSDGDIMKSFRLFDDDDSGFINFENVKKVSQILGTYLT 459
F + + K+ +S+ + +K+FR+FD D+SG+I + LG L+
Sbjct: 63 FMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLS 112
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 44.4 bits (100), Expect = 1e-05
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +1
Query: 124 NAQEQDLREAFNLLDYTGEGKIRAEDFRVAIKALGYEPTNEELQTMIRAVDKGDTGKLSF 303
+ + ++AF+L D G G+I ++A G PT E I ++ ++
Sbjct: 2 STDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDM 57
Query: 304 ENFETAIMRKIMALDSDGD---IMKSFRLFDDDDSGFINFENVKKVSQILGTYLTXXXXX 474
E F ++ + D GD +K F++FD D +G I ++ V LG L+
Sbjct: 58 EQF-LQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMD 116
Query: 475 XXXXXXXXXFDGLISVEEFMKMI 543
DG+++ +F++MI
Sbjct: 117 ELLKGVPVK-DGMVNYHDFVQMI 138
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 33.5 bits (73), Expect = 0.025
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Frame = +1
Query: 124 NAQEQDLREAFNLLDYTGEGKIRAEDFRVAIKALGYEPTNEELQTMIRAVDKGDTGKLSF 303
NA + L E F D GK+ E+F+ + L T E+ + + G + K+S
Sbjct: 329 NASMEFLEETFQKADADHSGKLSFEEFQHFVSLL---KTRSEIVDIFKEYTSG-SDKMSL 384
Query: 304 ENFETAIMRKIMA-LDSDG--DIMKSFRLFDDDDSGFINF 414
E F + A LDSD + SF DD G I F
Sbjct: 385 EQFRHFLSTSQKARLDSDSIRTLYVSFCSNDDSKMGLIEF 424
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 32.7 bits (71), Expect = 0.043
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +1
Query: 130 QEQDLREAFNLLDYTGEGKIRAEDFRVAIKAL-GYEPTNEELQTM----IRAVDKGDTGK 294
+E+ L+ AF + D +G I + + +K + G ++LQ + I VDK GK
Sbjct: 91 KEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGK 150
Query: 295 LSFENFETAI 324
+SFE F+ +
Sbjct: 151 ISFEEFKDIV 160
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 31.9 bits (69), Expect = 0.076
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +3
Query: 231 RAN*RGAADNDKSGGQRR--HREIELRKFRNGHN----EKDHGPGQRRRYHEELPTLR*R 392
R N R N+K GG RR +R+ + ++RN + +++H PG R+ + + R
Sbjct: 196 RRNSRDFPSNNKDGGYRRNNYRDRDSNRYRNSYRPSRPQREHSPGNYRKERYNVDSRPRR 255
Query: 393 *QWFH 407
+ FH
Sbjct: 256 ERHFH 260
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 30.7 bits (66), Expect = 0.17
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 343 LDSDGDIMKSFRLFDDDDSGFINFENVKKVSQILGTYLTXXXXXXXXXXXXXXFDGLISV 522
L+ D + ++F LFD G+I+FE++++ LG LT +G +S
Sbjct: 8 LEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGT--NGKVSR 65
Query: 523 EEFMKM 540
EEF ++
Sbjct: 66 EEFAEL 71
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 29.5 bits (63), Expect = 0.40
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +1
Query: 250 LQTMIRAVDKGDTGKLSFENFETAIMRKIMALDSDGDIMKSFRLFDDDDSGFINFENVKK 429
L+ + DK TG LS ++ + I ++ D +I F L+D + GF++ +V K
Sbjct: 581 LRHLFLRFDKSMTGSLSLQDLVSGIA-ELKFRDVMRNISFIFELYDFNGDGFMDKPDVLK 639
Query: 430 VSQIL 444
VS+ +
Sbjct: 640 VSEAI 644
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 29.1 bits (62), Expect = 0.53
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 118 LTNAQEQDLREAFNLLDYTGEGKIRAEDFRVAIKAL--GYEPTNEELQTMIRAVDKGDTG 291
LTN + L + FN LD G+G + D IKA + + +E++ IR V+ +G
Sbjct: 13 LTNEEILTLTDQFNKLDVDGKGYL---DQPTTIKAFEDSKKGSYDEVREAIREVNVDSSG 69
Query: 292 KLSFENF 312
++ E+F
Sbjct: 70 RVEPEDF 76
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/36 (27%), Positives = 25/36 (69%)
Frame = +1
Query: 43 TIAYSNSEEDLNQSSKVNEIKAKLTLTNAQEQDLRE 150
TI + S+ D+ ++ +N++K+++T+T+ +DL +
Sbjct: 269 TIRHLESQSDIINTT-INDLKSQMTITDESSEDLEK 303
>SPCC1020.03 |||mitochondrial iron ion
transporter|Schizosaccharomyces pombe|chr 3|||Manual
Length = 397
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 586 HRQNPTEFLCEHYFLSFS*ILRPISVRRNLYRHRQSFLQ 470
H NP++ L EH F++ I + ++ L+R ++ Q
Sbjct: 186 HSHNPSQLLFEHPFMALGLIFGSVVLKEWLFRKTRTVAQ 224
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 3.8
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +1
Query: 37 SGTIAYSNSEEDLNQSSKVNEIKAKLTLTNAQEQDLREAFNLLDYTGEGKIRAEDFRVAI 216
+G +AYS + ++S+K + + + TLT A+E++ +EA L K R ++
Sbjct: 520 AGGVAYSEYVKQNSKSAKKTKKRQRDTLT-AEEKEEKEAKELSKMMMSNKQRKLYSKLKN 578
Query: 217 KALGYEPTNEELQTMIRAVDKGDTGKLSFEN 309
+ E N L+ R ++K KL EN
Sbjct: 579 ENSKNENYNNALRNRKRDIEK--RKKLKVEN 607
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 DKGDTGKLSFENFETAIMRKIMALDSDGDIMKSFRLF-DDDDSGFINFENVKKV 432
D +TG L+ E+ + + + + + D+ + + DDDD+ FE+V ++
Sbjct: 185 DLDETGNLAPEDLKDEV-KSVHEFNEPNDLRQQEESYSDDDDTNVNEFEDVNEI 237
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,226,317
Number of Sequences: 5004
Number of extensions: 41350
Number of successful extensions: 173
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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