Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10a02
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 31 1.1
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 31 1.1
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 30 1.5
AC024751-3|AAK21513.2| 440|Caenorhabditis elegans Hypothetical ... 29 4.6
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 28 6.1
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 28 6.1
AF077542-1|AAC26295.2| 386|Caenorhabditis elegans Serpentine re... 28 6.1
AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical ... 28 6.1
AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical... 28 8.1
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 289 AQKLCNDIVQADDRPNTTPPRVKLSKITFQSTNKVNGKIYRSVTLE 426
A+K CN + Q+D PN P + LS I FQ+ N Y + ++
Sbjct: 144 AEKYCNLVFQSD--PNNLPTLLLLSAINFQTKNLEKSMQYSMLAIK 187
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 289 AQKLCNDIVQADDRPNTTPPRVKLSKITFQSTNKVNGKIYRSVTLE 426
A+K CN + Q+D PN P + LS I FQ+ N Y + ++
Sbjct: 144 AEKYCNLVFQSD--PNNLPTLLLLSAINFQTKNLEKSMQYSMLAIK 187
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +1
Query: 433 KVTGKPAPHAENVKRKPEKKFNQKIFADIAVNTLVTGPLRCDNECVTLIRKRGDSLNCRC 612
K T P+ + + F + + T+ TG + D +C+ + G S+ C C
Sbjct: 588 KTTPTPSSGTSTIVTENSSTFESVSTSSVPTTTVKTGDPQVD-DCLRRMSDSGGSVICDC 646
Query: 613 PSKQVNN 633
P+ Q N
Sbjct: 647 PNGQFKN 653
>AC024751-3|AAK21513.2| 440|Caenorhabditis elegans Hypothetical
protein Y18H1A.10 protein.
Length = 440
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -3
Query: 438 DFPFF*SYRAINFSINFVCTLEGNFTEFHSRWCCVWTIVCLHYVIAKLLCTPGHLITEEE 259
D P F YR + + + GN+ +F R +W + + +I +C G L T++
Sbjct: 339 DAPQFEVYREMRENCRYRYRYRGNWEKFSRRTNLMWIVYIANRLIDTEICPEG-LFTDKR 397
Query: 258 RR 253
R+
Sbjct: 398 RK 399
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 283 RRAQKLCNDIVQADDRPNTTPPRVKLSKIT--FQSTNKVNGKIYRSVTLEK 429
+R KLC DIVQ + + + T F +TNKV SVT EK
Sbjct: 236 QRCSKLCGDIVQVVSKTTGSYSTYNYTIYTGKFNNTNKVYCTSCNSVTSEK 286
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +1
Query: 310 IVQADDRPNTTPPRVKLSKITFQST--NKVNGKIYRSV--TLEKRKVTGKPAPHAENVKR 477
++ DD P T PP K K + T +K +G + R++ KR+ A H +
Sbjct: 29 VISVDDEPTTAPPVTKPVKKGWIKTAKSKASGTLRRTLFGRSTKRRAKDAEAIHEAGEEE 88
Query: 478 KPEKKFNQ 501
+ E+ + Q
Sbjct: 89 EDEEDYTQ 96
>AF077542-1|AAC26295.2| 386|Caenorhabditis elegans Serpentine
receptor, class w protein66 protein.
Length = 386
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 558 ITPQRTSYKGINCNVCKDFLIKFFLRFSFDVFS 460
IT + TS+ G+ + + F+IKF L FD S
Sbjct: 121 ITRRMTSFFGVLMTIVRFFIIKFALNRKFDTIS 153
>AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical
protein F12E12.10 protein.
Length = 319
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 547 LRCDNECVTLIRKRGDSLNCRCPSKQVNN 633
+ N V +I G+S NCR P +NN
Sbjct: 56 IEISNRLVVIIALHGESFNCRIPLNGLNN 84
>AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical
protein F25E5.2 protein.
Length = 338
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = -3
Query: 432 PFF*SYRAINFSINF---VCTLEGNFTEFHSRWCC 337
PF YR NF +C ++GNF E ++ CC
Sbjct: 94 PFADGYRTDNFIPKHNLAICEIKGNFPELNAAICC 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,235,816
Number of Sequences: 27780
Number of extensions: 267780
Number of successful extensions: 686
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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