Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a02
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.0  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   7.0  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   7.0  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   9.3  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   9.3  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   9.3  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +2

Query: 8   ISVK*TR*QQKLILFNDWIYLNLTKPL*EAVQQ 106
           I+++ ++  ++ ++ ND+I  N T P+ E +QQ
Sbjct: 8   ITMEISKNHKEQLISNDYILDNYTSPIVEFLQQ 40


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 336 VWTIVCLHYVIAKLL 292
           +WT VCL +V   LL
Sbjct: 306 IWTGVCLTFVFGALL 320


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 336 VWTIVCLHYVIAKLL 292
           +WT VCL +V   LL
Sbjct: 306 IWTGVCLTFVFGALL 320


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 64  NPIIEQNQFLLLPSLFD 14
           NP I   +FL+ PSL D
Sbjct: 95  NPFIGMGEFLIDPSLED 111


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 591 SSLANQRHTLVITPQRTSYKGIN 523
           ++LA+Q    +++PQ    KGIN
Sbjct: 208 ATLADQIKNGIVSPQEERPKGIN 230


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 591 SSLANQRHTLVITPQRTSYKGIN 523
           ++LA+Q    +++PQ    KGIN
Sbjct: 203 ATLADQIKNGIVSPQEERPKGIN 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,745
Number of Sequences: 438
Number of extensions: 3249
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)