Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a01
         (466 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   2.8  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   4.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   4.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   4.9  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 370 LLSVTCDLIFCH 405
           L S+TC L FCH
Sbjct: 161 LKSITCALQFCH 172


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 340 HGKTTSQAHFLLSVTCD 390
           HG T + +H  LS  CD
Sbjct: 76  HGLTNTASHTRLSCDCD 92


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 340 HGKTTSQAHFLLSVTCD 390
           HG T + +H  LS  CD
Sbjct: 81  HGLTNTASHTRLSCDCD 97


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 340 HGKTTSQAHFLLSVTCD 390
           HG T + +H  LS  CD
Sbjct: 81  HGLTNTASHTRLSCDCD 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,974
Number of Sequences: 438
Number of extensions: 1758
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)