Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12o01
(707 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 25 0.70
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.70
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 25 0.70
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 0.70
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.6
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 2.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.8
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 3.7
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 5.0
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 5.0
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 5.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 6.6
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 22 6.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 6.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 6.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 8.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.7
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.0 bits (52), Expect = 0.70
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 655 KVVKNLFSLFTGL*VFLSALNNHCIADTDTAPSKQPALNGTPSP 524
K+V L L+T V N + +T K A++G P P
Sbjct: 435 KIVNMLNQLYTAFDVLTDPKKNPNVYKVETVGDKYMAVSGLPEP 478
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.0 bits (52), Expect = 0.70
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -3
Query: 537 GHLHPYQPELNHLQCLSLQQHQALKMICPSQ 445
G + P P ++++ LS + L ++CP+Q
Sbjct: 207 GSVRPKFPSMDNINGLSTESKADLPLLCPAQ 237
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 25.0 bits (52), Expect = 0.70
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 655 KVVKNLFSLFTGL*VFLSALNNHCIADTDTAPSKQPALNGTPSP 524
K+V L L+T V N + +T K A++G P P
Sbjct: 435 KIVNMLNQLYTAFDVLTDPKKNPNVYKVETVGDKYMAVSGLPEP 478
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 25.0 bits (52), Expect = 0.70
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 565 APSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDM 455
A Q A TPSP P+ + ATSS+ DD+
Sbjct: 385 ASGAQFATPCTPSPPRGPGGVPTSVIQAATSSVSDDL 421
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +2
Query: 392 MWFRIIWYSARRKWTYVDWDG 454
+W R IW + +W D+ G
Sbjct: 77 VWLRFIWTDYQLQWDEADYGG 97
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.4 bits (48), Expect = 2.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +1
Query: 424 KKMDICGLGWTYHL 465
++ D CG GW H+
Sbjct: 574 ERFDFCGCGWPQHM 587
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/40 (20%), Positives = 19/40 (47%)
Frame = +2
Query: 335 MLRITSITGRFILLVVGYWMWFRIIWYSARRKWTYVDWDG 454
+++I + + LL+ +W ++ W +W D+ G
Sbjct: 57 LMQIIDVDEKNQLLITN--LWLKLEWNDVNMRWNVSDYGG 94
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 3.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 613 VFLSALNNHCIADTDTAPSKQPALNGTPSPISARTKPPSVS 491
V L N+ A T T+PS + +PSP S + SVS
Sbjct: 64 VELGWFNDSAAAITSTSPSYPGGGSSSPSPSSPSSFFSSVS 104
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 5.0
Identities = 6/20 (30%), Positives = 10/20 (50%)
Frame = +2
Query: 395 WFRIIWYSARRKWTYVDWDG 454
W ++W + W D+DG
Sbjct: 94 WMTLMWTDSHLSWKPSDFDG 113
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 5.0
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 376 CCWILDVVQDY 408
CCW+ D ++Y
Sbjct: 466 CCWVCDQCEEY 476
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 5.0
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 376 CCWILDVVQDY 408
CCW+ D ++Y
Sbjct: 556 CCWVCDQCEEY 566
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 523 WVKVSRLEQVALMEQYPYQLY 585
WV ++ L+ +EQY + L+
Sbjct: 311 WVAINELQDSFWLEQYSWALF 331
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.8 bits (44), Expect = 6.6
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 433 PFS-SSTVPDNPEPHPISNNKQDESSGNRSNSKHLS 329
PF +T+ P+P D SSG+ S H S
Sbjct: 46 PFGVENTISSVPQPPRSLEGSYDSSSGDSPVSSHSS 81
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 523 WVKVSRLEQVALMEQYPYQLY 585
WV ++ L+ +EQY + L+
Sbjct: 279 WVAINELQDSFWLEQYSWALF 299
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 6.6
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 507 NHLQCLSLQQHQALKMICPSQSTYVHFLLALYQIILNHIQYPTTSKMNL 361
N +C+ Q L++ YV +++ + NHI+Y +T+K N+
Sbjct: 122 NATRCIGRIQWSKLQVF---DCRYVTTTSGMFEALCNHIKY-STNKGNI 166
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 556 KQPALNGTPSPISARTKPPS 497
K P++ P PIS T P S
Sbjct: 647 KMPSMPLLPRPISCHTTPDS 666
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 499 SVSLSTATSSIEDDMSIPIHICPFSSSTVPDNPEPHPISNNKQDESS 359
S+ LSTATS+ ++ + P +SS+ +N + +N+ +SS
Sbjct: 509 SLGLSTATSTCSLAVAKQQNQVPLTSSSNVNNNSGNGNTNSSARDSS 555
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,816
Number of Sequences: 438
Number of extensions: 4578
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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