Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12m17
         (619 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104758-1|AAI04759.1|  465|Homo sapiens trinucleotide repeat co...    32   1.4  
BC052491-1|AAH52491.1|  464|Homo sapiens trinucleotide repeat co...    32   1.4  
AY165003-1|AAN73884.1|  465|Homo sapiens CUG-BP and ETR-3 like f...    32   1.4  
AL589765-4|CAI17167.1|  415|Homo sapiens trinucleotide repeat co...    32   1.4  
AL589765-3|CAI17166.1|  465|Homo sapiens trinucleotide repeat co...    32   1.4  
AF329264-1|AAK07474.1|  462|Homo sapiens CUG-BP and ETR-3 like f...    32   1.4  
AB209264-1|BAD92501.1|  441|Homo sapiens trinucleotide repeat co...    32   1.4  
BC011851-1|AAH11851.1|  314|Homo sapiens chromosome 20 open read...    31   3.3  
BC007957-1|AAH07957.1|  314|Homo sapiens chromosome 20 open read...    31   3.3  
BC000643-1|AAH00643.1|  314|Homo sapiens chromosome 20 open read...    31   3.3  
AL121891-8|CAD55940.1|  298|Homo sapiens chromosome 20 open read...    31   3.3  
AL121891-7|CAD55939.1|  314|Homo sapiens chromosome 20 open read...    31   3.3  
BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein.          30   5.7  
AK022696-1|BAB14186.1|  938|Homo sapiens protein ( Homo sapiens ...    30   5.7  
X52378-1|CAA36604.1|  349|Homo sapiens mature non-specific cross...    29   9.9  
M33326-1|AAA59914.1|  349|Homo sapiens non-specific cross reacti...    29   9.9  
D90064-1|BAA14108.1|  349|Homo sapiens NCA-W272 protein.               29   9.9  
DQ822518-1|ABG46943.1|  349|Homo sapiens carcinoembryonic antige...    29   9.9  
BC026263-1|AAH26263.1|  349|Homo sapiens carcinoembryonic antige...    29   9.9  
AC004558-1|AAC13659.1|  349|Homo sapiens CGM6_HUMAN protein.           29   9.9  

>BC104758-1|AAI04759.1|  465|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 465

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 243 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 419
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>BC052491-1|AAH52491.1|  464|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 464

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 243 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 419
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AY165003-1|AAN73884.1|  465|Homo sapiens CUG-BP and ETR-3 like
           factor 3 protein.
          Length = 465

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 243 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 419
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AL589765-4|CAI17167.1|  415|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 415

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 243 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 419
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AL589765-3|CAI17166.1|  465|Homo sapiens trinucleotide repeat
           containing 4 protein.
          Length = 465

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 243 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 419
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AF329264-1|AAK07474.1|  462|Homo sapiens CUG-BP and ETR-3 like
           factor 3 protein.
          Length = 462

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 243 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 419
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 84  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143


>AB209264-1|BAD92501.1|  441|Homo sapiens trinucleotide repeat
           containing 4 variant protein.
          Length = 441

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 243 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 419
           KP +   +GE +K F+   GK       RK+F P        +    DG  KGC F + +
Sbjct: 60  KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 119


>BC011851-1|AAH11851.1|  314|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 314

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 159 TRQAVKNVSRQPLHNIE--NMGKVVSAGPTKPNEPTKKGETKK 281
           +R    +  ++PLHN E    G+V   GP +P EP   G  ++
Sbjct: 24  SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66


>BC007957-1|AAH07957.1|  314|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 314

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 159 TRQAVKNVSRQPLHNIE--NMGKVVSAGPTKPNEPTKKGETKK 281
           +R    +  ++PLHN E    G+V   GP +P EP   G  ++
Sbjct: 24  SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66


>BC000643-1|AAH00643.1|  314|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 314

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 159 TRQAVKNVSRQPLHNIE--NMGKVVSAGPTKPNEPTKKGETKK 281
           +R    +  ++PLHN E    G+V   GP +P EP   G  ++
Sbjct: 24  SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66


>AL121891-8|CAD55940.1|  298|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 298

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 159 TRQAVKNVSRQPLHNIE--NMGKVVSAGPTKPNEPTKKGETKK 281
           +R    +  ++PLHN E    G+V   GP +P EP   G  ++
Sbjct: 24  SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66


>AL121891-7|CAD55939.1|  314|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 314

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 159 TRQAVKNVSRQPLHNIE--NMGKVVSAGPTKPNEPTKKGETKK 281
           +R    +  ++PLHN E    G+V   GP +P EP   G  ++
Sbjct: 24  SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66


>BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein.
          Length = 1139

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 138 DIFGDHLTRQAVKNVSRQPLHNIENMGKVVSAGPT-KPNEPTKKGETKKSFLSNTGKAIQ 314
           D  GD L+ +      R  +  I    KVV+A     PN P K+G  +K  L   G+  +
Sbjct: 571 DSVGDSLSGKEDLGRKRTTMLKIATAAKVVNANQNASPNVPGKRGRPRKLKLCKAGRPPK 630

Query: 315 STPSRKVFTPRA-VNVGS 365
           +T    + T    V+ GS
Sbjct: 631 NTGKSLISTKNTPVSPGS 648


>AK022696-1|BAB14186.1|  938|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12634 fis, clone NT2RM4001858, weakly similar to
           T-BOX CONTAINING PROTEIN TBX6L. ).
          Length = 938

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 138 DIFGDHLTRQAVKNVSRQPLHNIENMGKVVSAGPT-KPNEPTKKGETKKSFLSNTGKAIQ 314
           D  GD L+ +      R  +  I    KVV+A     PN P K+G  +K  L   G+  +
Sbjct: 375 DSVGDSLSGKEDLGRKRTTMLKIATAAKVVNANQNASPNVPGKRGRPRKLKLCKAGRPPK 434

Query: 315 STPSRKVFTPRA-VNVGS 365
           +T    + T    V+ GS
Sbjct: 435 NTGKSLISTKNTPVSPGS 452


>X52378-1|CAA36604.1|  349|Homo sapiens mature non-specific cross
           reacting  antigen NCA-95 protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 542 SPNYRWRGAWRGELLQVTRFRQWN 471
           +P+ RWR  W+G LL  + F  WN
Sbjct: 6   APSCRWRIPWQGLLLTASLFTFWN 29


>M33326-1|AAA59914.1|  349|Homo sapiens non-specific cross reacting
           antigen protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 542 SPNYRWRGAWRGELLQVTRFRQWN 471
           +P+ RWR  W+G LL  + F  WN
Sbjct: 6   APSCRWRIPWQGLLLTASLFTFWN 29


>D90064-1|BAA14108.1|  349|Homo sapiens NCA-W272 protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 542 SPNYRWRGAWRGELLQVTRFRQWN 471
           +P+ RWR  W+G LL  + F  WN
Sbjct: 6   APSCRWRIPWQGLLLTASLFTFWN 29


>DQ822518-1|ABG46943.1|  349|Homo sapiens carcinoembryonic
           antigen-related cell adhesion molecule 8 protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 542 SPNYRWRGAWRGELLQVTRFRQWN 471
           +P+ RWR  W+G LL  + F  WN
Sbjct: 6   APSCRWRIPWQGLLLTASLFTFWN 29


>BC026263-1|AAH26263.1|  349|Homo sapiens carcinoembryonic
           antigen-related cell adhesion molecule 8 protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 542 SPNYRWRGAWRGELLQVTRFRQWN 471
           +P+ RWR  W+G LL  + F  WN
Sbjct: 6   APSCRWRIPWQGLLLTASLFTFWN 29


>AC004558-1|AAC13659.1|  349|Homo sapiens CGM6_HUMAN protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 542 SPNYRWRGAWRGELLQVTRFRQWN 471
           +P+ RWR  W+G LL  + F  WN
Sbjct: 6   APSCRWRIPWQGLLLTASLFTFWN 29


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,581,441
Number of Sequences: 237096
Number of extensions: 1586416
Number of successful extensions: 2675
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2674
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)