Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12m09
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 66 3e-12
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 50 2e-07
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 48 9e-07
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 48 9e-07
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 45 1e-05
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 43 5e-05
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 41 2e-04
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 37 0.002
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 37 0.002
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 37 0.003
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 36 0.004
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 36 0.004
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 33 0.036
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 29 0.59
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 27 1.8
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 27 2.4
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 2.4
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 4.2
SPAC1952.15c |rec24|mug6|meiotic recombination protein Rec24|Sch... 25 7.3
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 25 9.7
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 66.5 bits (155), Expect = 3e-12
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Frame = +1
Query: 112 MSVSRLVAVTGC-DSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEKLCAHTFPLDV 288
M + V +TGC + G+G A+A + +EGF +A + E L K T LDV
Sbjct: 1 MEAEKFVLITGCSEGGIGNALALKFHQEGFQVLATAR---QVERMDNLTKAGLQTLKLDV 57
Query: 289 TRVESVQEFRKYVLTVLKDNPKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAM 468
T +SV+E + V + H ++NNAG + + + VN G +
Sbjct: 58 TDEDSVREVEQEVRKFTNGS----LHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVI 113
Query: 469 RVISAFLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLE 648
R+ AF ++ + K I+NV S P AAY+ASKA LLA + L +E
Sbjct: 114 RMNKAFQHQLIRA--------KGTIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIE 165
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 50.4 bits (115), Expect = 2e-07
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Frame = +1
Query: 136 VTGCDSGLGWAVAARLAREGFITIAGMHKGIETEA-AKALE---KLCAHTFPLDVTRVES 303
VTG G+G A +LA GF + + +A AK LE K+ T +D T+ +
Sbjct: 62 VTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELETVAKVKTRTIAIDYTKT-T 120
Query: 304 VQEFRKYVLTVLKDNPKYKFHAVVNNAGVMTV--GKYEWMTASMIESPVHVNLLGAMRVI 477
+ F K + +D ++NN G + T ++ +H+N G +
Sbjct: 121 AETFEK----LHQDLVGTPITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGTLHTT 176
Query: 478 SAFLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGL 618
A L + + + P+ I+ +GS GL P P + Y+ SKA L
Sbjct: 177 KAVLSIMLRERQKNEKGPRCLILTMGSFAGLLPSPYLSTYAGSKAFL 223
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 48.4 bits (110), Expect = 9e-07
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 5/178 (2%)
Frame = +1
Query: 130 VAVTGCDSGLGWAVAARLAREGFITIAGMHKG--IETEAAKALEKLCAHTFPLDVTRVES 303
V +TG GLG+A+ +G+ IA I E +K L+ LDVT V+S
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIACSRAPDTITIEHSKLLK------LKLDVTDVKS 61
Query: 304 VQEFRKYVLTVLKDNPKYKF---HAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRV 474
V+ T KD K +F V+NNAG VG++E + ++VN G +
Sbjct: 62 VE-------TAFKD-AKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYI 113
Query: 475 ISAFLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLE 648
L +R+ S RI+ + S G P P + Y+ASK + L++ + E
Sbjct: 114 TKEALNLMRE------SGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMRE 165
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 48.4 bits (110), Expect = 9e-07
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Frame = +1
Query: 124 RLVAVTGCDSGLGWAVAARLAREGF-ITIAGMHKGIETEAAKALEKLCAHT----FPLDV 288
++ VTG G+G+ A LAR+G + +AG ++ + K + H+ LD+
Sbjct: 43 KVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLDL 102
Query: 289 TRVESVQEFRKYVLTVLKDNPKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAM 468
ESV + + + + K H +VNNAG+M +E +T E + N L
Sbjct: 103 LDFESVYQAAESFIA-----KEEKLHILVNNAGIMN-PPFE-LTKDGYELQIQTNYLSHY 155
Query: 469 RVISAFLPEIRKTAIETTSKPKPRIINVGSHCGLQ 573
LP +R+TA E RI++V S LQ
Sbjct: 156 LFTELLLPTLRRTA-EECRPGDVRIVHVASIAYLQ 189
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 44.8 bits (101), Expect = 1e-05
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Frame = +1
Query: 124 RLVAVTGCDSGLGWAVAARLAREGF-ITIAGMHKGIETEAAKALEKLCAHTFPLDVTRVE 300
R V +TG SGLG +A +++G I G ++ E ++L L + V+
Sbjct: 2 RKVLITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQ 61
Query: 301 SVQEFRKYVLTVLKDNPKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVIS 480
S + K + ++ VV+ AGV+ + I+S + NL+ A+++
Sbjct: 62 SDMKNLKSIFESVE------IDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSK 115
Query: 481 AFLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLE 648
+ E + S+ I+N+ S LP + Y+ASKAGL + T+ L E
Sbjct: 116 MAILEWFRNK---NSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAE 168
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 42.7 bits (96), Expect = 5e-05
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Frame = +1
Query: 124 RLVAVTGCDSGLGWAVA---ARLAREGFITIAGMHKGIETEAAKALE-KLCAHTFPLDVT 291
+ + +TG SG+G + A A++A+ I A +E E AK LE K PL +
Sbjct: 7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVE-EIAKELESKYEVSVLPLKL- 64
Query: 292 RVESVQEFRKYVLTVLKDNPKY--KFHAVVNNAGV-MTVGKYEWMTASMIESPVHVNLLG 462
V + K + V++ PK ++NNAG+ + K + + + N+LG
Sbjct: 65 ---DVSDL-KSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLG 120
Query: 463 AMRVISAFLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLH 642
M + A LP SK K I+NVGS G + + Y ++K+ L T L
Sbjct: 121 MMAMTRAVLPIFY-------SKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSALR 173
Query: 643 LE 648
E
Sbjct: 174 KE 175
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 40.7 bits (91), Expect = 2e-04
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Frame = +1
Query: 136 VTGCDSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEK---LCAHTFPLDVTRVESV 306
V G G+G+++A A+ G I TE AK L + + HT +D++R ++V
Sbjct: 26 VFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTLKIDISRSDTV 85
Query: 307 QEFRKYVLTVLKDNPKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAF 486
+ + + + K+ H VV NAG+ E +++N RV + +
Sbjct: 86 EAGVEEIQKIFKE-----IHVVVANAGMPFRRSVLDSPPHEFEKVMNINTNSVYRV-AYY 139
Query: 487 LPEIRKTA----IETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLEHS 654
+ +I K + T+ I+N H AAY ASKA + L + L +E +
Sbjct: 140 MGKIFKKQGFGNLIATASMSATIVNAPQH--------IAAYCASKAAVRQLCKALAVEWA 191
Query: 655 E 657
E
Sbjct: 192 E 192
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 37.1 bits (82), Expect = 0.002
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Frame = +1
Query: 130 VAVTGCDSGLGWAVAARLAREGF-ITIAGMHKGIETEAAKALEKLCAHTFPLDVTRVESV 306
+ VTG GLG A+A L G +TI EA L H ESV
Sbjct: 25 ILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIHED--QQVSFESV 82
Query: 307 QEFRKY--VLTVLKDNPKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVIS 480
+ Y V ++++ P H VV+ AG G + + S+ E + N L ++ V
Sbjct: 83 -DLTSYESVHSMIERLPFCPDH-VVHCAGSCIPGFFTELDPSVFEKQMRQNYLASVYVCH 140
Query: 481 AFLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLE 648
A + ++ E + RI+ VGS P+ ++AYS KA + L L E
Sbjct: 141 AAIRRMK----EISPSYSRRILLVGSLLSSLPIIGYSAYSPVKAAVRNLADSLRQE 192
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 37.1 bits (82), Expect = 0.002
Identities = 44/185 (23%), Positives = 72/185 (38%), Gaps = 2/185 (1%)
Frame = +1
Query: 109 AMSVSRLVAVTGCDSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEKLCAHTFPLDV 288
A + +++ +TG G+G A A L ++ + E E DV
Sbjct: 2 AETAEKVILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDV 61
Query: 289 TRVESVQEFRKYVLTVLKDNPKY-KFHAVVNNAGVMT-VGKYEWMTASMIESPVHVNLLG 462
T V + T +K K+ K +V+ NAGV+ + K + +N
Sbjct: 62 TEVGKAS-----IETAIK---KFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFS 113
Query: 463 AMRVISAFLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLH 642
+ + +P +RKT K I+ V S ++ PA+AAY SKA + L L
Sbjct: 114 VVETVKYAIPHLRKT--------KGTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLG 165
Query: 643 LEHSE 657
E +
Sbjct: 166 SEEPD 170
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 36.7 bits (81), Expect = 0.003
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 1/175 (0%)
Frame = +1
Query: 127 LVAVTGCDSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEKLCAHT-FPLDVTRVES 303
L+ +TG LG A+ GF ++A + TE A L+ + ++T+ +
Sbjct: 37 LIVITGGSGILGHAIIQEALDRGF-SVASLDS---TEPASFLQYNSKFSALKCNITKDKD 92
Query: 304 VQEFRKYVLTVLKDNPKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISA 483
V+ + LK + F A++N A + ++ ++ N++G + + SA
Sbjct: 93 VEG----CVHSLKKMNRTPF-ALINAAAIAPKNHLLSISRQELQKCFETNVIGQLAITSA 147
Query: 484 FLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLE 648
P + + P P ++N+ S AYS+SKA L++L L E
Sbjct: 148 LFPLLLQD-------PNPHVVNIASSLAYFSAMGVGAYSSSKAALVSLHETLEEE 195
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 36.3 bits (80), Expect = 0.004
Identities = 27/97 (27%), Positives = 39/97 (40%)
Frame = +1
Query: 358 KFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAFLPEIRKTAIETTSKPKP 537
+ ++NNAG E T I + + N+ GA+ VI A P R S+
Sbjct: 42 RIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVIKAITPIFR-------SQHNG 94
Query: 538 RIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLE 648
IINV S G P Y +K + ++ L E
Sbjct: 95 MIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWE 131
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 36.3 bits (80), Expect = 0.004
Identities = 27/97 (27%), Positives = 39/97 (40%)
Frame = +1
Query: 358 KFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAFLPEIRKTAIETTSKPKP 537
+ ++NNAG E T I + + N+ GA+ VI A P R S+
Sbjct: 42 RIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVIKAITPIFR-------SQHNG 94
Query: 538 RIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLE 648
IINV S G P Y +K + ++ L E
Sbjct: 95 MIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWE 131
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 33.1 bits (72), Expect = 0.036
Identities = 45/176 (25%), Positives = 79/176 (44%)
Frame = +1
Query: 124 RLVAVTGCDSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEKLCAHTFPLDVTRVES 303
R+V +TG G+G V ++ E +AG+ ++ A L A DV++ +
Sbjct: 6 RVVLITGAAGGIG-KVLCKMFTELGDRVAGIDIVDPSKVQDAALALQA-----DVSKADQ 59
Query: 304 VQEFRKYVLTVLKDNPKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISA 483
++ + V+ L P ++NNAG+ +E ++ + V + L G
Sbjct: 60 IETAIEKVIQTL--GP---IDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRY 114
Query: 484 FLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLEH 651
+P + K + I+N+GS G L + AYSA+KAGL LT+ L + +
Sbjct: 115 VIPHMAKQGKGGS------IVNIGSVNGHIYLGS-PAYSAAKAGLENLTKALAVRY 163
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 29.1 bits (62), Expect = 0.59
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 6/177 (3%)
Frame = +1
Query: 136 VTGCDSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEK---LCAHTFPLDVTRVESV 306
V G G+G A+ + A G + +AAK + + + +T DVT + V
Sbjct: 26 VFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKAAKEIAQANGVKTYTCKCDVTIPKEV 85
Query: 307 QEFRKYVLTVLKDNPKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAF 486
+ + V VV N G+ T MT + ++VNLLG V
Sbjct: 86 EHAFAEIQKVFDT-----IDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNA 140
Query: 487 LPEIRKT---AIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLE 648
P +K ++ T+ ++NV AY+ SKAG++ L + L +E
Sbjct: 141 GPIFQKQGHGSLVATASMSGVVVNVPQQQ--------CAYNTSKAGVIQLIKSLAVE 189
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 112 MSVSRLVAVTGCDSGLGWAVAARL 183
MS + +TG +SGLG+ +A RL
Sbjct: 1 MSFRKYALITGSNSGLGFGIATRL 24
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 136 VTGCDSGLGWAVAARLAREG 195
+TG DSG+G A A AREG
Sbjct: 47 LTGGDSGIGKAAAVMFAREG 66
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 360 FIFRIIFQDCKHV-LPEFLNAFNSSYV*RECVRTQFFEGFRCFGFYSFVHTS 208
F F F C+ + F++ ++S+ V C FF F F F+SF+ TS
Sbjct: 79 FFFFFFFSHCRRFHIAIFIHPYDSNVVPFFC----FFFYFSLFSFFSFLFTS 126
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 496 IRKTAIETTS----KPKPRIINVGSHCGLQPLPAFAAYSA 603
+RK+A+ +S P P I +GS LQ P+FAA A
Sbjct: 234 VRKSAVTPSSDPYNSPPPSIPLLGSQTNLQLAPSFAAPQA 273
>SPAC1952.15c |rec24|mug6|meiotic recombination protein
Rec24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 350
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 295 VESVQEFRKYVLTVLKDNPKYKFHAVVNNAGV 390
+E + KY T+L+ PK K V+ N+ V
Sbjct: 57 IEDQEHCEKYASTLLEPRPKTKKDVVLKNSNV 88
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/52 (19%), Positives = 25/52 (48%)
Frame = +1
Query: 190 EGFITIAGMHKGIETEAAKALEKLCAHTFPLDVTRVESVQEFRKYVLTVLKD 345
E I + H+ +++ + LC+H F ++ T + + + +++ L D
Sbjct: 113 EDEIRLFKQHQSLDSFLLSLFDLLCSHHFSVEFTSISLIIKSSQWLFYTLSD 164
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,654,704
Number of Sequences: 5004
Number of extensions: 54688
Number of successful extensions: 181
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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