Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12k22
         (537 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M37190-1|AAA36553.1|  471|Homo sapiens ras inhibitor protein.          29   7.9  
AL136924-1|CAB66858.1|  861|Homo sapiens hypothetical protein pr...    29   7.9  
AL132821-2|CAI23572.1|  944|Homo sapiens Ras and Rab interactor ...    29   7.9  
AL049538-1|CAI19340.1|  944|Homo sapiens Ras and Rab interactor ...    29   7.9  
AB060339-1|BAB84317.1|  895|Homo sapiens RIN2 protein.                 29   7.9  

>M37190-1|AAA36553.1|  471|Homo sapiens ras inhibitor protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = +3

Query: 393 HSKNTDARKLSKQTIEQLKEAANQNSELNQKIQALLKK*MINIL 524
           H  +TD  +  +Q + Q+K   +Q+SEL+  I++L+ +  I+++
Sbjct: 123 HVSSTDMLQTIRQFMTQVKNYLSQSSELDPPIESLIPEDQIDVV 166


>AL136924-1|CAB66858.1|  861|Homo sapiens hypothetical protein
           protein.
          Length = 861

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = +3

Query: 393 HSKNTDARKLSKQTIEQLKEAANQNSELNQKIQALLKK*MINIL 524
           H  +TD  +  +Q + Q+K   +Q+SEL+  I++L+ +  I+++
Sbjct: 513 HVSSTDMLQTIRQFMTQVKNYLSQSSELDPPIESLIPEDQIDVV 556


>AL132821-2|CAI23572.1|  944|Homo sapiens Ras and Rab interactor 2
           protein.
          Length = 944

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = +3

Query: 393 HSKNTDARKLSKQTIEQLKEAANQNSELNQKIQALLKK*MINIL 524
           H  +TD  +  +Q + Q+K   +Q+SEL+  I++L+ +  I+++
Sbjct: 596 HVSSTDMLQTIRQFMTQVKNYLSQSSELDPPIESLIPEDQIDVV 639


>AL049538-1|CAI19340.1|  944|Homo sapiens Ras and Rab interactor 2
           protein.
          Length = 944

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = +3

Query: 393 HSKNTDARKLSKQTIEQLKEAANQNSELNQKIQALLKK*MINIL 524
           H  +TD  +  +Q + Q+K   +Q+SEL+  I++L+ +  I+++
Sbjct: 596 HVSSTDMLQTIRQFMTQVKNYLSQSSELDPPIESLIPEDQIDVV 639


>AB060339-1|BAB84317.1|  895|Homo sapiens RIN2 protein.
          Length = 895

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = +3

Query: 393 HSKNTDARKLSKQTIEQLKEAANQNSELNQKIQALLKK*MINIL 524
           H  +TD  +  +Q + Q+K   +Q+SEL+  I++L+ +  I+++
Sbjct: 547 HVSSTDMLQTIRQFMTQVKNYLSQSSELDPPIESLIPEDQIDVV 590


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,907,371
Number of Sequences: 237096
Number of extensions: 1364812
Number of successful extensions: 3236
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3234
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)