Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12k14
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   1.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   1.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   3.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.3  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -3

Query: 390 GCHCLYQINGSTFFGIPIFEYVSGVKCSRFLPSR 289
           GC  +   +G+T  G+ +   V G KC   +P +
Sbjct: 98  GCTIIEPTSGNTGIGLAMAAAVRGYKCIIVMPEK 131


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 350 KKVLPFIWYRQWQPYEENLPAGNL 421
           KKVLP+ WY+     + +L   +L
Sbjct: 292 KKVLPYYWYKYQDRRDTDLSRADL 315


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 354 FFGIPIFEYVSGVKCSRFLPSRAAINS 274
           F G P       ++C R+ P+RA + +
Sbjct: 258 FMGCPTRNVKEMIRCLRYRPARAIVET 284


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 354 FFGIPIFEYVSGVKCSRFLPSRAAINS 274
           F G P       ++C R+ P+RA + +
Sbjct: 129 FMGCPTRNVKEMIRCLRYRPARAIVET 155


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 354 FFGIPIFEYVSGVKCSRFLPSRAAINS 274
           F G P       ++C R+ P+RA + +
Sbjct: 258 FMGCPTRNVKEMIRCLRYRPARAIVET 284


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,602
Number of Sequences: 438
Number of extensions: 3546
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)