Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12j14
(625 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064590-1|AAH64590.1| 306|Homo sapiens Yip1 domain family, mem... 31 3.3
BC009674-1|AAH09674.1| 123|Homo sapiens YIPF1 protein protein. 31 3.3
AK000823-1|BAA91389.1| 123|Homo sapiens protein ( Homo sapiens ... 31 3.3
U56387-1|AAC50643.2| 913|Homo sapiens protease PC6 isoform A pr... 30 5.8
U49114-1|AAA91807.1| 899|Homo sapiens prohormone convertase 5 p... 30 5.8
BC012064-1|AAH12064.1| 913|Homo sapiens proprotein convertase s... 30 5.8
AL589653-1|CAI40809.1| 1560|Homo sapiens proprotein convertase s... 30 5.8
AL391868-1|CAI40675.1| 1560|Homo sapiens proprotein convertase s... 30 5.8
AL359253-2|CAH73743.1| 913|Homo sapiens proprotein convertase s... 30 5.8
AL353607-4|CAI41235.1| 101|Homo sapiens proprotein convertase s... 30 5.8
AL353607-3|CAI41234.1| 1560|Homo sapiens proprotein convertase s... 30 5.8
AL353607-2|CAI41233.1| 913|Homo sapiens proprotein convertase s... 30 5.8
BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for IM... 30 7.6
AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha... 30 7.6
AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alp... 30 7.6
AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alp... 30 7.6
AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alp... 30 7.6
>BC064590-1|AAH64590.1| 306|Homo sapiens Yip1 domain family, member
1 protein.
Length = 306
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 464 RNTNI-NLCSVSFSDFRCVHIFSKFKRPPRPMLHVYEHKYGTWILVI 601
RN+ + N+ S SF + CV+ +S F P +L + K WILV+
Sbjct: 186 RNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVM 232
>BC009674-1|AAH09674.1| 123|Homo sapiens YIPF1 protein protein.
Length = 123
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 464 RNTNI-NLCSVSFSDFRCVHIFSKFKRPPRPMLHVYEHKYGTWILVI 601
RN+ + N+ S SF + CV+ +S F P +L + K WILV+
Sbjct: 3 RNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVM 49
>AK000823-1|BAA91389.1| 123|Homo sapiens protein ( Homo sapiens
cDNA FLJ20816 fis, clone ADSE00693. ).
Length = 123
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 464 RNTNI-NLCSVSFSDFRCVHIFSKFKRPPRPMLHVYEHKYGTWILVI 601
RN+ + N+ S SF + CV+ +S F P +L + K WILV+
Sbjct: 3 RNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVM 49
>U56387-1|AAC50643.2| 913|Homo sapiens protease PC6 isoform A
protein.
Length = 913
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 72 CSISPDFDYRSHSNKKNMKEITLFVLLCCGIVVFGKQCCPDGIIISPRGKC 224
CSIS FD+ S + K+ K+ + L C G CP G ++ G C
Sbjct: 818 CSISYYFDHSSENGYKSCKKCDISCLTCNGPGFKNCTSCPSGYLLD-LGMC 867
>U49114-1|AAA91807.1| 899|Homo sapiens prohormone convertase 5
precursor protein.
Length = 899
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 72 CSISPDFDYRSHSNKKNMKEITLFVLLCCGIVVFGKQCCPDGIIISPRGKC 224
CSIS FD+ S + K+ K+ + L C G CP G ++ G C
Sbjct: 804 CSISYYFDHSSENGYKSCKKCDISCLTCNGPGFKNCTSCPSGYLLD-LGMC 853
>BC012064-1|AAH12064.1| 913|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 913
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 72 CSISPDFDYRSHSNKKNMKEITLFVLLCCGIVVFGKQCCPDGIIISPRGKC 224
CSIS FD+ S + K+ K+ + L C G CP G ++ G C
Sbjct: 818 CSISYYFDHSSENGYKSCKKCDISCLTCNGPGFKNCTSCPSGYLLD-LGMC 867
>AL589653-1|CAI40809.1| 1560|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 1560
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 72 CSISPDFDYRSHSNKKNMKEITLFVLLCCGIVVFGKQCCPDGIIISPRGKC 224
CSIS FD+ S + K+ K+ + L C G CP G ++ G C
Sbjct: 491 CSISYYFDHSSENGYKSCKKCDISCLTCNGPGFKNCTSCPSGYLLD-LGMC 540
>AL391868-1|CAI40675.1| 1560|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 1560
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 72 CSISPDFDYRSHSNKKNMKEITLFVLLCCGIVVFGKQCCPDGIIISPRGKC 224
CSIS FD+ S + K+ K+ + L C G CP G ++ G C
Sbjct: 491 CSISYYFDHSSENGYKSCKKCDISCLTCNGPGFKNCTSCPSGYLLD-LGMC 540
>AL359253-2|CAH73743.1| 913|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 913
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 72 CSISPDFDYRSHSNKKNMKEITLFVLLCCGIVVFGKQCCPDGIIISPRGKC 224
CSIS FD+ S + K+ K+ + L C G CP G ++ G C
Sbjct: 818 CSISYYFDHSSENGYKSCKKCDISCLTCNGPGFKNCTSCPSGYLLD-LGMC 867
>AL353607-4|CAI41235.1| 101|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 101
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 72 CSISPDFDYRSHSNKKNMKEITLFVLLCCGIVVFGKQCCPDGIIISPRGKC 224
CSIS FD+ S + K+ K+ + L C G CP G ++ G C
Sbjct: 37 CSISYYFDHSSENGYKSCKKCDISCLTCNGPGFKNCTSCPSGYLLD-LGMC 86
>AL353607-3|CAI41234.1| 1560|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 1560
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 72 CSISPDFDYRSHSNKKNMKEITLFVLLCCGIVVFGKQCCPDGIIISPRGKC 224
CSIS FD+ S + K+ K+ + L C G CP G ++ G C
Sbjct: 491 CSISYYFDHSSENGYKSCKKCDISCLTCNGPGFKNCTSCPSGYLLD-LGMC 540
>AL353607-2|CAI41233.1| 913|Homo sapiens proprotein convertase
subtilisin/kexin type 5 protein.
Length = 913
Score = 30.3 bits (65), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 72 CSISPDFDYRSHSNKKNMKEITLFVLLCCGIVVFGKQCCPDGIIISPRGKC 224
CSIS FD+ S + K+ K+ + L C G CP G ++ G C
Sbjct: 818 CSISYYFDHSSENGYKSCKKCDISCLTCNGPGFKNCTSCPSGYLLD-LGMC 867
>BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for
IMAGE:5480483) protein.
Length = 466
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 442 LSDGSKHTSAMEIIPELESVPFLYIAPRQYSSGSSAKTKSGVS 314
LSD + S + P ++ P L +AP Q+ S S T SG S
Sbjct: 331 LSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSSGYS 373
>AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha 1
chain precursor protein.
Length = 1860
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 442 LSDGSKHTSAMEIIPELESVPFLYIAPRQYSSGSSAKTKSGVS 314
LSD + S + P ++ P L +AP Q+ S S T SG S
Sbjct: 568 LSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSSGYS 610
>AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 714
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 442 LSDGSKHTSAMEIIPELESVPFLYIAPRQYSSGSSAKTKSGVS 314
LSD + S + P ++ P L +AP Q+ S S T SG S
Sbjct: 515 LSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSSGYS 557
>AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 442 LSDGSKHTSAMEIIPELESVPFLYIAPRQYSSGSSAKTKSGVS 314
LSD + S + P ++ P L +AP Q+ S S T SG S
Sbjct: 568 LSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSSGYS 610
>AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 442 LSDGSKHTSAMEIIPELESVPFLYIAPRQYSSGSSAKTKSGVS 314
LSD + S + P ++ P L +AP Q+ S S T SG S
Sbjct: 568 LSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSSGYS 610
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,517,973
Number of Sequences: 237096
Number of extensions: 2051137
Number of successful extensions: 4651
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4651
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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