Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12j06
         (284 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   0.32 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   0.32 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   3.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    20   5.2  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               20   5.2  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   5.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   5.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   6.8  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          19   9.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   9.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 0.32
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 153  VTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARGYPGTVPLRC 10
            VT   R  +  S     + P++R  A   T +GG V R + G+  L C
Sbjct: 1289 VTGSTRVGEGQSSKVAAQVPTNRVPAR-ITSFGGHVVRPWRGSATLAC 1335


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 0.32
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 153  VTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVARGYPGTVPLRC 10
            VT   R  +  S     + P++R  A   T +GG V R + G+  L C
Sbjct: 1285 VTGSTRVGEGQSSKVAAQVPTNRVPAR-ITSFGGHVVRPWRGSATLAC 1331


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 130 DWPRY*RDSPR 162
           +WP Y RD P+
Sbjct: 544 EWPSYSRDEPK 554


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 106 TPPAVAPGPRDPS 68
           TPP  AP P  PS
Sbjct: 337 TPPKPAPPPPPPS 349


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 282 FFLLLVVLTFIY 247
           FF+L++ L F+Y
Sbjct: 8   FFILVITLIFLY 19


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = +1

Query: 34  VPACNATAPTCGWGRVGPVRRPAASSDVARPLDW 135
           +PAC   A  C    V  +  P    ++ + L W
Sbjct: 312 IPACTCKAVACLDPYVYAISHPKYRLELQKRLPW 345


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 117 DVAGRRRPSHRAHATPATCWGG 52
           +VAG  R   R +AT A  W G
Sbjct: 353 EVAGVMRAVKRCNATGAFSWIG 374


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 282 FFLLLVVLTFIYVNSSFTT*SRVQN 208
           FFL ++V+ ++Y   S    SR +N
Sbjct: 207 FFLPMLVMLYVYGRISCVIASRHRN 231


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +1

Query: 58 PTCGWGRVGP 87
          P  GWG  GP
Sbjct: 33 PLFGWGSYGP 42


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 140 ATDVTRLDDSRPDKRAYP 193
           ATD T  D+  PD    P
Sbjct: 650 ATDTTNFDEYPPDSDPPP 667


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,949
Number of Sequences: 438
Number of extensions: 1333
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)