Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12i13
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   4.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   4.0  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   5.3  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   5.3  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   5.3  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   5.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 351 YSSSLKILCKIDSRTLLQFSF 289
           YSS+ K LCK D++   ++ F
Sbjct: 663 YSSNNKTLCKCDAQNCRRYLF 683


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 477 LFLSNVCFLLMKSPKMISDVILYSK*NNL 563
           LFL+++C L+   P  ++D    ++  N+
Sbjct: 10  LFLASLCLLVQAVPNKVADKTYVTRQKNI 38


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 477 LFLSNVCFLLMKSPKMISDVILYSK*NNL 563
           LFL+++C L+   P  ++D    ++  N+
Sbjct: 10  LFLASLCLLVQAVPNKVADKTYVTRQKNI 38


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 338 SEDEYLRTYRRSISFGQNVKKDLIPLLIHTKDD 436
           +  EYL   R +++ G+N +K+++  L     D
Sbjct: 430 NRSEYLNHLRANVAEGRNQRKNVLDRLFRMDRD 462


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 308 HCCNSRLRDIHQHVGNQDSRN 246
           HC N+   D  Q+  NQ+  N
Sbjct: 413 HCVNNNQNDNIQNTNNQNDNN 433


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 SNVN*ENYMNENPKRNRHFN 74
           +N N  NY N N K+ +++N
Sbjct: 95  NNYNNNNYNNNNYKKLQYYN 114


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 SNVN*ENYMNENPKRNRHFN 74
           +N N  NY N N K+ +++N
Sbjct: 95  NNYNNNNYNNNNYKKLQYYN 114


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 SNVN*ENYMNENPKRNRHFN 74
           +N N  NY N N K+ +++N
Sbjct: 95  NNYNNNNYNNNNYKKLQYYN 114


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 SNVN*ENYMNENPKRNRHFN 74
           +N N  NY N N K+ +++N
Sbjct: 95  NNYNNNNYNNNNYKKLQYYN 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,692
Number of Sequences: 438
Number of extensions: 3372
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)