Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12h13
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.21 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   2.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   2.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   2.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -1

Query: 287 CAAFFWSVALCPCCFFIL-DIFSAALACD*IFWCPRAIVYC 168
           C  +F+ + L  CC FI+  +    L C   F+C   I+ C
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLC 297



 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 290 FCAAFFWSVALCPCCFFI 237
           FCA   +++ L  CC FI
Sbjct: 170 FCAFIIFTMHLLFCCAFI 187


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 379 NDLPDDLKNI*HNQYHLDL 435
           ND P  L  + +N +H+DL
Sbjct: 318 NDTPSILHELRNNYFHMDL 336


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 103 LFDRFPNYY*TVKNVL 56
           L DR+ N+Y T K++L
Sbjct: 42  LLDRYDNFYQTTKSLL 57


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 379 NDLPDDLKNI*HNQYHLDL 435
           ND P  L  + +N +H+DL
Sbjct: 318 NDTPSILHELRNNYFHMDL 336


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 103 LFDRFPNYY*TVKNVL 56
           L DR+ N+Y T K++L
Sbjct: 42  LLDRYDNFYQTTKSLL 57


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +1

Query: 331 PDPKTYKQHFENKHP 375
           P P  Y  H+   HP
Sbjct: 164 PPPPVYTHHYARYHP 178


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 325 GPYKPHKHGQV 293
           GP+KP  HG V
Sbjct: 470 GPWKPSMHGGV 480


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 174 HNGSRTPENSVTS*SCGKDVQNEET 248
           HN   TP  +  S  CG+    EE+
Sbjct: 287 HNTRGTPRTTPASSRCGQLFNTEES 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,604
Number of Sequences: 336
Number of extensions: 2168
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)