Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12h12
         (563 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q59HV7 Cluster: Argonaute 2; n=1; Bombyx mori|Rep: Argo...    94   2e-18
UniRef50_A0CAR7 Cluster: Chromosome undetermined scaffold_162, w...    37   0.37 
UniRef50_UPI0000519A86 Cluster: PREDICTED: similar to Muscle-spe...    33   6.1  
UniRef50_Q2H096 Cluster: Lon protease homolog; n=1; Chaetomium g...    33   6.1  

>UniRef50_Q59HV7 Cluster: Argonaute 2; n=1; Bombyx mori|Rep:
           Argonaute 2 - Bombyx mori (Silk moth)
          Length = 1029

 Score = 94.3 bits (224), Expect = 2e-18
 Identities = 53/98 (54%), Positives = 53/98 (54%)
 Frame = +2

Query: 269 MARGKNKGGKKEAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEDDXXXXXXXESXXX 448
           MARGKNKGGKKEAPD                             IEDD       ES   
Sbjct: 1   MARGKNKGGKKEAPDSTKTPSSESQPSESQPSTSQIPTTEPTTTIEDDLGGLGLGESRKR 60

Query: 449 XXXXXXTEKQESLAQAELSNPKLTQTDNPKAEVPKTEA 562
                 TEKQESLAQAELSNPKLTQTDNPKAEVPKTEA
Sbjct: 61  RPRKKPTEKQESLAQAELSNPKLTQTDNPKAEVPKTEA 98


>UniRef50_A0CAR7 Cluster: Chromosome undetermined scaffold_162,
           whole genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_162,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 3004

 Score = 36.7 bits (81), Expect = 0.37
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -2

Query: 238 SNVLIIQLLFQDYCWYI--ICTTLKLQTHLCKNPTDRYQLFLRYT*EIDSF 92
           S++L +  LF    WY+  +CTT  ++ H   N  D YQ+ LR   + D +
Sbjct: 540 SDILCVDCLFNSAAWYLKPLCTTDYIKQHQLNNDDDAYQISLRSRIDYDLY 590


>UniRef50_UPI0000519A86 Cluster: PREDICTED: similar to Muscle-specific
            protein 300 CG33715-PB, isoform B; n=1; Apis
            mellifera|Rep: PREDICTED: similar to Muscle-specific
            protein 300 CG33715-PB, isoform B - Apis mellifera
          Length = 3526

 Score = 32.7 bits (71), Expect = 6.1
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 270  WLEEKTKVVRKRHLILRKPLLLKVSLQKVN 359
            WLE+K K V+ R L+ R P+ ++  LQK N
Sbjct: 2611 WLEDKEKEVKSRPLLERDPISVEAELQKHN 2640


>UniRef50_Q2H096 Cluster: Lon protease homolog; n=1; Chaetomium
           globosum|Rep: Lon protease homolog - Chaetomium globosum
           (Soil fungus)
          Length = 971

 Score = 32.7 bits (71), Expect = 6.1
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = +3

Query: 297 RKRHLILRKPLLLKVSLQKVNLQHP 371
           R+R  ILRKP   K  LQK NLQHP
Sbjct: 14  RRRKRILRKPRQRKRRLQKPNLQHP 38


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,655,880
Number of Sequences: 1657284
Number of extensions: 6794527
Number of successful extensions: 11591
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11585
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)