Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12h12
         (563 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   5.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   5.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.3  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 151 YTNVFVA*VWYKLYTNNSLETTVG*LEHCLL 243
           Y N+F    WY   TN     ++     CLL
Sbjct: 21  YLNIFFITPWYDFPTNQKYYPSLAKCYACLL 51


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 229 LIIQLLFQDYCWYIICTTLKLQTHLCKNP 143
           LI+ L+F  +  +I+ +   +  +L  NP
Sbjct: 235 LILLLMFTSHFIFIVVSIFYMSAYLISNP 263


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 470 EKQESLAQAELSNPKLTQTDNP 535
           +K+ S A   L+NPKL   D P
Sbjct: 225 KKRLSFAAEVLTNPKLMFCDEP 246



 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 270 WLEEKTKVVRKRHLILRKPLLLKVSL 347
           W + K  + R    + ++PLL+KV L
Sbjct: 394 WAQFKAVLWRSILAVFKEPLLIKVRL 419


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 470 EKQESLAQAELSNPKLTQTDNP 535
           +K+ S A   L+NPKL   D P
Sbjct: 225 KKRLSFAAEVLTNPKLMFCDEP 246



 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 270 WLEEKTKVVRKRHLILRKPLLLKVSL 347
           W + K  + R    + ++PLL+KV L
Sbjct: 394 WAQFKAVLWRSILAVFKEPLLIKVRL 419


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 544 LSFRIISLSKLWV*Q 500
           LS  IISL +LW+ Q
Sbjct: 195 LSINIISLVQLWIFQ 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,024
Number of Sequences: 336
Number of extensions: 2144
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)