Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12h12
         (563 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical ...    27   9.3  
AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical ...    27   9.3  

>AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8b protein.
          Length = 586

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -3

Query: 543 SAFGLSV*VSFGFDNSA*ANDSCFSV 466
           SA GLS+ V  GFDN     D  FSV
Sbjct: 311 SAIGLSIAVHIGFDNYEKLLDGAFSV 336


>AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8a protein.
          Length = 551

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -3

Query: 543 SAFGLSV*VSFGFDNSA*ANDSCFSV 466
           SA GLS+ V  GFDN     D  FSV
Sbjct: 276 SAIGLSIAVHIGFDNYEKLLDGAFSV 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,224,316
Number of Sequences: 27780
Number of extensions: 175014
Number of successful extensions: 324
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)