Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12h07
         (425 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0VBV6 Cluster: Extradiol ring-cleavage dioxygenase Lig...    34   1.1  
UniRef50_Q014C9 Cluster: Vacuolar transporter chaperone; n=2; Os...    31   7.5  

>UniRef50_A0VBV6 Cluster: Extradiol ring-cleavage dioxygenase LigAB,
           LigA subunit; n=2; Proteobacteria|Rep: Extradiol
           ring-cleavage dioxygenase LigAB, LigA subunit - Delftia
           acidovorans SPH-1
          Length = 108

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 103 GCNVKITL-FS*ILRLPFLDSNYVAYVRDGL-KM*PVRSSVFSYIKSSRDSVAGV 261
           GCN ++ + F+ +L +P+ D  Y+  +RDG+ K  PVR+ V++   ++ + +AGV
Sbjct: 56  GCNGQLLMHFAPLLGMPWAD--YLQAMRDGVQKHGPVRAGVYAMTTATNEKIAGV 108


>UniRef50_Q014C9 Cluster: Vacuolar transporter chaperone; n=2;
           Ostreococcus|Rep: Vacuolar transporter chaperone -
           Ostreococcus tauri
          Length = 704

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 186 WIENVACPF*CIQLHKEFARFCGRCSMNTQKNALMNL 296
           WI+ V   F  IQ+HK F++F   C+M+  ++AL  L
Sbjct: 448 WIDEVTSTFDVIQVHK-FSKFLHGCAMHFPRDALHTL 483


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 366,610,669
Number of Sequences: 1657284
Number of extensions: 6638815
Number of successful extensions: 11776
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11774
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)