Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12h03
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    28   0.26 
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    23   7.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   7.3  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   9.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   9.7  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = -2

Query: 293  LIPGHQIVSAGV-VMFSIDVG-AEINVLHR*DTLSRSVDHIWLKWHHNIFTASPK 135
            L PGH +V   +  +  +D+     N L+    + + + HIW +WH    +   K
Sbjct: 1600 LTPGHFLVGNHLQTVADVDIADVPTNRLNHWRLIQKHMQHIWNRWHREYLSTLQK 1654


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 276 LMTRDEKKCLVVRRGQPFTLDLLLNRAYDPDKDAISFI 389
           L  + ++ C++     P  LD      Y PD+D +  I
Sbjct: 37  LYQKAQQDCILFMGINPLRLDQYKKFVYPPDRDTMCLI 74


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 307 LSVEDSPSRLICCSIG 354
           LS +D+P  LIC S+G
Sbjct: 489 LSSKDAPMELICQSVG 504


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 469 SEPLSNRGTAADVPSEGPRF 410
           S+P    G+A  + SEG RF
Sbjct: 330 SQPARTGGSAVTITSEGQRF 349


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 193  RDKVSYRCKTLISAPTSMENITTPAD 270
            RD+   RC + +S+  ++   T PAD
Sbjct: 943  RDRHKIRCASYVSSNATVVPATQPAD 968


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,044
Number of Sequences: 2352
Number of extensions: 15431
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)