Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12g19
(452 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q176W4 Cluster: Paraflagellar rod protein, putative; n=... 63 3e-09
UniRef50_UPI0000D57874 Cluster: PREDICTED: similar to GRIP and c... 54 2e-06
UniRef50_Q32KE8 Cluster: RE58741p; n=3; Sophophora|Rep: RE58741p... 47 2e-04
UniRef50_Q54HI5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.23
UniRef50_O97237 Cluster: Putative uncharacterized protein MAL3P2... 36 0.31
UniRef50_UPI0000D55CAD Cluster: PREDICTED: similar to Hyaluronan... 35 0.71
UniRef50_UPI000023DDAF Cluster: hypothetical protein FG04518.1; ... 35 0.94
UniRef50_UPI0000EC9DD7 Cluster: UPI0000EC9DD7 related cluster; n... 35 0.94
UniRef50_A7NVX5 Cluster: Chromosome chr5 scaffold_2, whole genom... 35 0.94
UniRef50_A0DV70 Cluster: Chromosome undetermined scaffold_65, wh... 35 0.94
UniRef50_A2FCX6 Cluster: Ankyrin repeat protein, putative; n=10;... 34 1.2
UniRef50_A0BP42 Cluster: Chromosome undetermined scaffold_12, wh... 34 1.2
UniRef50_A0BNR4 Cluster: Chromosome undetermined scaffold_119, w... 34 1.2
UniRef50_A0DS84 Cluster: Chromosome undetermined scaffold_61, wh... 34 1.6
UniRef50_A2E8Z5 Cluster: Viral A-type inclusion protein, putativ... 33 2.9
UniRef50_A2DCA6 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_A5HXZ8 Cluster: Putative uncharacterized protein; n=4; ... 33 3.8
UniRef50_O97291 Cluster: Putative uncharacterized protein MAL3P7... 33 3.8
UniRef50_Q4C1M5 Cluster: TPR repeat precursor; n=1; Crocosphaera... 32 5.0
UniRef50_A5BBH5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0
UniRef50_Q5GQL9 Cluster: Recombination protein gp46; n=2; root|R... 32 5.0
UniRef50_Q9VD46 Cluster: CG5740-PA, isoform A; n=3; Drosophila m... 32 6.6
UniRef50_Q95V49 Cluster: Occludin-like protein; n=13; Sophophora... 32 6.6
UniRef50_Q8IL35 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_Q4UCY7 Cluster: Spliceosome-associated factor, putative... 32 6.6
UniRef50_O76447 Cluster: Holocentric chromosome binding protein ... 32 6.6
UniRef50_A2DKP8 Cluster: Viral A-type inclusion protein, putativ... 32 6.6
UniRef50_A0BJN6 Cluster: Chromosome undetermined scaffold_110, w... 32 6.6
UniRef50_P58302 Cluster: DNA double-strand break repair rad50 AT... 32 6.6
UniRef50_Q49XE1 Cluster: Putative exonuclease; n=1; Staphylococc... 31 8.7
UniRef50_Q9SN90 Cluster: Structural maintenance of chromosomes p... 31 8.7
>UniRef50_Q176W4 Cluster: Paraflagellar rod protein, putative; n=2;
Culicidae|Rep: Paraflagellar rod protein, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 1112
Score = 62.9 bits (146), Expect = 3e-09
Identities = 38/93 (40%), Positives = 44/93 (47%)
Frame = +1
Query: 115 SPFDELSREDLIHKCKGLLVIAQKAKQAKSELQAELETXXXXXXXXXXXXXXXXXXXXXX 294
SPFD LSREDL+ KC+GLL IAQKAKQAK E E
Sbjct: 15 SPFDNLSREDLVKKCRGLLGIAQKAKQAKDECLEENRMLKEQLSQAETQKAADKDCLKAM 74
Query: 295 XXXVDSLTEQKLNFITEVDSAHTKVKELNXKVN 393
V SLTEQKL+ VD V L +++
Sbjct: 75 QEMVGSLTEQKLSAAMRVDELEKAVAGLRREID 107
>UniRef50_UPI0000D57874 Cluster: PREDICTED: similar to GRIP and
coiled-coil domain-containing 2; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to GRIP and
coiled-coil domain-containing 2 - Tribolium castaneum
Length = 1323
Score = 53.6 bits (123), Expect = 2e-06
Identities = 34/111 (30%), Positives = 55/111 (49%)
Frame = +1
Query: 82 NHPSQDGPPKKSPFDELSREDLIHKCKGLLVIAQKAKQAKSELQAELETXXXXXXXXXXX 261
N PS+ G KK + LS+E+L+ +C+ LL++AQKAKQAK LQ E
Sbjct: 4 NTPSESG--KKIVLENLSKEELVKRCERLLILAQKAKQAKDALQEE---------NNELK 52
Query: 262 XXXXXXXXXXXXXXVDSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIK 414
+++LT+QKL F+T ++ ++ L KV ++ +
Sbjct: 53 NRLKSESGDATTAIIENLTQQKLQFVTTIEDLKSQNAALVNKVQNCTQDAR 103
>UniRef50_Q32KE8 Cluster: RE58741p; n=3; Sophophora|Rep: RE58741p -
Drosophila melanogaster (Fruit fly)
Length = 1135
Score = 47.2 bits (107), Expect = 2e-04
Identities = 37/122 (30%), Positives = 53/122 (43%)
Frame = +1
Query: 67 MEAIQNHPSQDGPPKKSPFDELSREDLIHKCKGLLVIAQKAKQAKSELQAELETXXXXXX 246
MEA +Q P +P + LS++++I K KGLL IA+KAKQAK EL E
Sbjct: 1 MEAASPRETQKNP---NPIEALSKDEIISKYKGLLNIAKKAKQAKDELTEE----NHRLK 53
Query: 247 XXXXXXXXXXXXXXXXXXXVDSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKA 426
V T++ L EV++ K KE ++ Q+ E + K
Sbjct: 54 DALKRAAEKQSSLPAMQEMVQDFTDKNLILTEEVNNLKRKTKEDADRLTQFEIENESLKR 113
Query: 427 DL 432
L
Sbjct: 114 QL 115
>UniRef50_Q54HI5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 716
Score = 36.7 bits (81), Expect = 0.23
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +1
Query: 304 VDSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDN 447
VDS E+K +++++ + +++++N K N+Y + IK+ L KDN
Sbjct: 379 VDSFNEEKERIKSQMETLNGQIEDINIKNNEYEDRIKEMNVLLSQKDN 426
>UniRef50_O97237 Cluster: Putative uncharacterized protein
MAL3P2.16; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P2.16 - Plasmodium
falciparum (isolate 3D7)
Length = 1139
Score = 36.3 bits (80), Expect = 0.31
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 313 LTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
+ E N+ ++ ++KELN +N+Y EE+ YK ++IV + K
Sbjct: 783 INETNYNY-KNIEEKENEIKELNNTLNKYKEEMNNYKEEIIVINEK 827
>UniRef50_UPI0000D55CAD Cluster: PREDICTED: similar to Hyaluronan
mediated motility receptor (Intracellular hyaluronic
acid binding protein) (Receptor for hyaluronan-mediated
motility); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Hyaluronan mediated motility receptor
(Intracellular hyaluronic acid binding protein)
(Receptor for hyaluronan-mediated motility) - Tribolium
castaneum
Length = 813
Score = 35.1 bits (77), Expect = 0.71
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 307 DSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
D L Q + E+D A +++EL + Y E+++ Y+ +L+V N+
Sbjct: 662 DELAHQFEQLLQELDKAKDRIQELENLIGPYQEQLEAYQNELVVLTNE 709
>UniRef50_UPI000023DDAF Cluster: hypothetical protein FG04518.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04518.1 - Gibberella zeae PH-1
Length = 541
Score = 34.7 bits (76), Expect = 0.94
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 304 VDSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADL 432
V++L E+K N E+D+A+ + ELN ++ Y ++I Q ++
Sbjct: 393 VEALMEEKSNLRKELDTANATISELNARIADYQKQIIQRDTEI 435
>UniRef50_UPI0000EC9DD7 Cluster: UPI0000EC9DD7 related cluster; n=1;
Gallus gallus|Rep: UPI0000EC9DD7 UniRef100 entry -
Gallus gallus
Length = 138
Score = 34.7 bits (76), Expect = 0.94
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 334 FITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
F E+ HTK+ EL +V YN +++++ A+L +D K
Sbjct: 47 FTVELGERHTKIGELTAEVGDYNRKLRKHAAELEERDLK 85
>UniRef50_A7NVX5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 2098
Score = 34.7 bits (76), Expect = 0.94
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 307 DSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYK 423
D L+ Q N E++ AHT+++ L + + ++EIKQYK
Sbjct: 1787 DQLSRQLYNISRELNEAHTRIRILEEERAERDKEIKQYK 1825
>UniRef50_A0DV70 Cluster: Chromosome undetermined scaffold_65, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_65,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1653
Score = 34.7 bits (76), Expect = 0.94
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 319 EQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
E++ E+D T+V +LN ++N Y EIKQ + +IV+ +
Sbjct: 425 EKQSKSTVELDRYKTQVNQLNQQINNYKVEIKQLQEQMIVQQQE 468
>UniRef50_A2FCX6 Cluster: Ankyrin repeat protein, putative; n=10;
Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
putative - Trichomonas vaginalis G3
Length = 468
Score = 34.3 bits (75), Expect = 1.2
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 304 VDSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
++S +E+ +E+ + +K+ + ++NQY E KQYK ++ +NK
Sbjct: 111 INSNSEEVTQLKSEIQNLKSKIATMENEINQYKNEGKQYKDEISNLNNK 159
>UniRef50_A0BP42 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 680
Score = 34.3 bits (75), Expect = 1.2
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +1
Query: 343 EVDSAHTKVKELNXKVNQYNEEIKQ--YKADLIVKDNK 450
++D + ++KE N K+NQ E++KQ Y+ D ++ NK
Sbjct: 435 KIDQQNLEIKEKNQKINQLQEQVKQAIYEKDNAIQQNK 472
>UniRef50_A0BNR4 Cluster: Chromosome undetermined scaffold_119,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_119,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 621
Score = 34.3 bits (75), Expect = 1.2
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 304 VDSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
+ L E+K I + ++K +N ++N Y+ +IK YK +L +K+ +
Sbjct: 417 LQELIEKKKCLIQKESDIEQQIKRVNAQINSYHSKIKSYKQELELKNQE 465
>UniRef50_A0DS84 Cluster: Chromosome undetermined scaffold_61, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_61,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 896
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 307 DSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYK 423
DSL +QK+ + + + H K +ELN K+ Q NEEI Q K
Sbjct: 592 DSLLQQKI--LLQQNVFHLKEQELNTKLGQLNEEIVQLK 628
>UniRef50_A2E8Z5 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 4057
Score = 33.1 bits (72), Expect = 2.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 346 VDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
+D +H +++EL K++QY EEIK +L NK
Sbjct: 1569 LDDSHKQIEELQAKIDQYEEEIKSKDENLNNLQNK 1603
Score = 33.1 bits (72), Expect = 2.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 346 VDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
+D +H +++EL K++QY EEIK +L NK
Sbjct: 1723 LDDSHKQIEELQAKIDQYEEEIKSKDENLNNLQNK 1757
>UniRef50_A2DCA6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 384
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 316 TEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
TEQ + ++ K K L K+NQ +E+IK KA+LI N+
Sbjct: 285 TEQIFDLKQRLERKQQKKKILKFKINQLSEDIKNSKAELIKVSNE 329
>UniRef50_A5HXZ8 Cluster: Putative uncharacterized protein; n=4;
Clostridium botulinum|Rep: Putative uncharacterized
protein - Clostridium botulinum A str. ATCC 3502
Length = 1350
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 331 NFITEVDSAHTKVKELNXKVNQYNEEIKQYK-ADLIVKD 444
NF+ ++S+ K+ ++ +NQY+ EIK+ K D+ +KD
Sbjct: 556 NFMLNLNSSKEKLIKIRENINQYSIEIKEIKDKDMFIKD 594
>UniRef50_O97291 Cluster: Putative uncharacterized protein MAL3P7.21;
n=4; Plasmodium|Rep: Putative uncharacterized protein
MAL3P7.21 - Plasmodium falciparum (isolate 3D7)
Length = 1946
Score = 32.7 bits (71), Expect = 3.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +1
Query: 304 VDSLTEQKLNFIT----EVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKD 444
+D +K N +T E+DS TK + + K QY EEIK K L +KD
Sbjct: 1781 LDDYKIEKKNLVTKYEKELDSYMTKYEFAHAKYKQYEEEIKDLKNKLKLKD 1831
>UniRef50_Q4C1M5 Cluster: TPR repeat precursor; n=1; Crocosphaera
watsonii WH 8501|Rep: TPR repeat precursor -
Crocosphaera watsonii
Length = 222
Score = 32.3 bits (70), Expect = 5.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = +1
Query: 304 VDSLTEQKLNFITEVDSA-----HTKVKELNXKVNQYNEEIKQYKADL-IVKDNK 450
+ S+ + K N E D H K+ + + QYNE IK+YK L ++K+NK
Sbjct: 146 IKSIKKDKQNLDAEKDGTYLSLLHQKLGSIYFTLGQYNEAIKEYKKGLKMLKENK 200
>UniRef50_A5BBH5 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1842
Score = 32.3 bits (70), Expect = 5.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 307 DSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYK 423
D L+ Q N E++ AH +++ L + + ++EIKQYK
Sbjct: 1492 DQLSRQLYNISRELNEAHXRIRILEEERAERDKEIKQYK 1530
>UniRef50_Q5GQL9 Cluster: Recombination protein gp46; n=2; root|Rep:
Recombination protein gp46 - Cyanophage phage S-PM2
Length = 576
Score = 32.3 bits (70), Expect = 5.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 304 VDSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKA 426
+D E+ + E + H + E N K+ + NEEIK+Y +
Sbjct: 216 IDKKNEKITELLNEELNHHNLINETNVKIEELNEEIKKYSS 256
>UniRef50_Q9VD46 Cluster: CG5740-PA, isoform A; n=3; Drosophila
melanogaster|Rep: CG5740-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 733
Score = 31.9 bits (69), Expect = 6.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 313 LTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVK 441
L +QK F +++D AH +L KV +I++ + +L VK
Sbjct: 33 LKQQKARFASQLDEAHKNASQLEAKVGDMQFKIQKLEQELSVK 75
>UniRef50_Q95V49 Cluster: Occludin-like protein; n=13;
Sophophora|Rep: Occludin-like protein - Drosophila
melanogaster (Fruit fly)
Length = 734
Score = 31.9 bits (69), Expect = 6.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 340 TEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDN 447
TE+ + K+ LN K+ N IK+ ++DL K+N
Sbjct: 375 TEISANEVKINSLNLKIEHLNNYIKELQSDLKNKEN 410
>UniRef50_Q8IL35 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1898
Score = 31.9 bits (69), Expect = 6.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 331 NFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDN 447
++IT++ + K +LN N N+EIK ++I DN
Sbjct: 1459 SYITKIKDSRKKYNDLNSNKNSKNDEIKNLNKNIIEDDN 1497
>UniRef50_Q4UCY7 Cluster: Spliceosome-associated factor, putative;
n=4; Piroplasmida|Rep: Spliceosome-associated factor,
putative - Theileria annulata
Length = 712
Score = 31.9 bits (69), Expect = 6.6
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +1
Query: 307 DSLTEQKLNFI---TEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDN 447
+S+ Q LNF T++++ +T+ +N ++N N+EI + VK+N
Sbjct: 567 NSINIQILNFQYTNTQINNINTQFNNINTEINNINKEINNFSVKKCVKEN 616
>UniRef50_O76447 Cluster: Holocentric chromosome binding protein
protein 1; n=1; Caenorhabditis elegans|Rep: Holocentric
chromosome binding protein protein 1 - Caenorhabditis
elegans
Length = 1475
Score = 31.9 bits (69), Expect = 6.6
Identities = 19/103 (18%), Positives = 39/103 (37%)
Frame = +1
Query: 142 DLIHKCKGLLVIAQKAKQAKSELQAELETXXXXXXXXXXXXXXXXXXXXXXXXXVDSLTE 321
D I + L +AQ++ LQ +L T +TE
Sbjct: 777 DKILDLQSQLELAQQSSDLADRLQEDLRTSDARVQELNIQVSELEQQIEVSSREFSVITE 836
Query: 322 QKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
++DS+ ++ E+ + + EE++ +AD + ++K
Sbjct: 837 ANKEMQLKLDSSEAQISEMTASLTAFQEEMQSTRADAVASEDK 879
>UniRef50_A2DKP8 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 1618
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 304 VDSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADL 432
+D L E+K N + ++ ELN K+NQ NEEI +Y+ +
Sbjct: 1082 IDELNEEKSN-------SEKQINELNQKLNQNNEEINKYQKQI 1117
>UniRef50_A0BJN6 Cluster: Chromosome undetermined scaffold_110,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_110,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 981
Score = 31.9 bits (69), Expect = 6.6
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +1
Query: 304 VDSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
++ + K N +++D + ++KEL ++++Y +IK Y+ + NK
Sbjct: 217 INEIKNLKGNSSSDIDRLNKRIKELETQISEYQLKIKNYETQISDYQNK 265
>UniRef50_P58302 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Thermoplasma volcanium|Rep: DNA
double-strand break repair rad50 ATPase - Thermoplasma
volcanium
Length = 895
Score = 31.9 bits (69), Expect = 6.6
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +1
Query: 307 DSLTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
D L + + I E+D+ + +++EL K+ EIK + ++ +K+NK
Sbjct: 186 DYLKNELQSKINEIDNNNKQIEELESKLRLIEPEIKALEEEINIKENK 233
>UniRef50_Q49XE1 Cluster: Putative exonuclease; n=1; Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305|Rep:
Putative exonuclease - Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 /DSM 20229)
Length = 1009
Score = 31.5 bits (68), Expect = 8.7
Identities = 9/38 (23%), Positives = 26/38 (68%)
Frame = +1
Query: 334 FITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDN 447
F+T+ + A+ ++++ + +N+ ++I+ YK+ L ++ N
Sbjct: 659 FLTKFEDAYNQIRQFDQTLNEIEQKIQNYKSTLAIEKN 696
>UniRef50_Q9SN90 Cluster: Structural maintenance of chromosomes
protein 2-2; n=1; Arabidopsis thaliana|Rep: Structural
maintenance of chromosomes protein 2-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1171
Score = 31.5 bits (68), Expect = 8.7
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 313 LTEQKLNFITEVDSAHTKVKELNXKVNQYNEEIKQYKADLIVKDNK 450
L +Q + V +A T++K+LN K++ +E+K+ K+ L+ K ++
Sbjct: 396 LEDQLRDAKISVGTAETELKQLNTKISHCEKELKEKKSQLMSKQDE 441
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,370,440
Number of Sequences: 1657284
Number of extensions: 3496707
Number of successful extensions: 14593
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 13797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14580
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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