Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g18
         (527 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    24   0.84 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   0.84 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.5  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   1.9  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   1.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   3.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   5.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   5.9  

>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 30/130 (23%), Positives = 48/130 (36%)
 Frame = +2

Query: 44  N*NKIEVMSSLRAAGLVIFRNYNQIIQFLLLQTSYGEHHWTPPKGHVDPGETDWMTALRE 223
           N + + V   LR + L+     +QI    L    + EH W   K   DP E   +T L  
Sbjct: 42  NNDTVVVKLGLRLSQLIDLNLKDQI----LTTNVWLEHEWQDHKFQWDPAEYGGVTELYV 97

Query: 224 TKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLS 403
             E   L     DI    N    Y V    K ++++  K+      +  SS   D+++  
Sbjct: 98  PSEHIWL----PDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFP 153

Query: 404 LQEAQEISKY 433
             +     K+
Sbjct: 154 FDQQTCFMKF 163


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 176 GHVDPGETDWMTALRET 226
           GHVD G+T  + ALR T
Sbjct: 152 GHVDHGKTTLLDALRNT 168


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 290 NYEVNGEPKTVVYWLAKLKNPE 355
           N +VN   K+ +  L KLK+PE
Sbjct: 729 NRQVNSAVKSTIQSLMKLKSPE 750


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 84  QVWLFSEIIIKLYNSY 131
           +V LFSE +IK +N+Y
Sbjct: 58  KVQLFSECLIKKFNAY 73


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 78  EPQVWLFSEIIIKLYNSY 131
           + +V LFSE +IK +N Y
Sbjct: 56  DEKVQLFSECLIKKFNGY 73


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 344 KNPEQTVTLSSEHQDMKWLSLQEAQEIS 427
           +N   +V L +    MKW  ++ A EIS
Sbjct: 198 ENKNGSVILDTARCSMKWTLIEHAFEIS 225


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 111 IKLYNSYYCKHPTENIIG 164
           I+ YN+YY  HP + + G
Sbjct: 139 IEPYNNYYIWHPGKIVNG 156


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 111 IKLYNSYYCKHPTENIIG 164
           I+ YN+YY  HP + + G
Sbjct: 139 IEPYNNYYIWHPGKIVNG 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,737
Number of Sequences: 438
Number of extensions: 2465
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)