Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12g17
(574 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 285 1e-77
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 281 3e-76
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 281 3e-76
SB_56| Best HMM Match : Actin (HMM E-Value=0) 279 9e-76
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 278 2e-75
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 7e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 71 7e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 60 2e-09
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 57 9e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 3e-06
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 44 7e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 32 0.29
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 32 0.38
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.38
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.51
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.51
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.51
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 31 0.67
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 31 0.67
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 31 0.67
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 31 0.67
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 30 1.2
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 30 1.2
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.2
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 30 1.5
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 30 1.5
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 29 2.0
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 2.0
SB_59022| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.4e-13) 29 2.7
SB_11513| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_1631| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_23026| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 285 bits (700), Expect = 1e-77
Identities = 129/132 (97%), Positives = 132/132 (100%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TQIMFETFNTPA 509
TQIMFETFN+PA
Sbjct: 121 TQIMFETFNSPA 132
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIV 153
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 281 bits (689), Expect = 3e-76
Identities = 128/132 (96%), Positives = 131/132 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TQIMFETFNTPA 509
TQIMFETFN+PA
Sbjct: 121 TQIMFETFNSPA 132
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIV 153
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 281 bits (689), Expect = 3e-76
Identities = 126/132 (95%), Positives = 131/132 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TQIMFETFNTPA 509
TQIMFETFN+PA
Sbjct: 121 TQIMFETFNSPA 132
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIV 153
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 279 bits (685), Expect = 9e-76
Identities = 127/130 (97%), Positives = 130/130 (100%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 480 IMFETFNTPA 509
IMFETFN+PA
Sbjct: 122 IMFETFNSPA 131
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIV 152
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 278 bits (682), Expect = 2e-75
Identities = 126/130 (96%), Positives = 130/130 (100%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 480 IMFETFNTPA 509
IMFETFN+PA
Sbjct: 122 IMFETFNSPA 131
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIV 152
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 386
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 93 PAMYVAIQAVLSLYASGRTTGIV 115
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 459 NREKMTQIMFETFNTPA 509
N + M +IMFETFN+PA
Sbjct: 78 NWDDMEKIMFETFNSPA 94
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 124 bits (298), Expect = 7e-29
Identities = 58/125 (46%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Frame = +3
Query: 132 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 305
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 306 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 483 MFETF 497
MFE +
Sbjct: 127 MFENY 131
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIV 573
+Y+AIQAVL+LYA G TG+V
Sbjct: 136 VYIAIQAVLTLYAQGLLTGVV 156
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +3
Query: 366 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 506
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVP 2175
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVA+QAV++LYASGRTTG V
Sbjct: 2175 PCMYVAVQAVMALYASGRTTGTV 2197
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +3
Query: 324 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 503
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 504 PA 509
PA
Sbjct: 63 PA 64
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +3
Query: 414 EHPVLLTEAPLNPKANREKMTQIMFETFNTPA 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPA 157
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/23 (65%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P +++++QAVLSLYA+GRTTG+V
Sbjct: 156 PALFISMQAVLSLYATGRTTGVV 178
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 108 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 278
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 279 GDEAQSKRGILTL 317
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 252 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 431
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 126 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 305
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 306 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 395
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P +YVAIQAVLSLYASGRTTG+V
Sbjct: 9 PAVYVAIQAVLSLYASGRTTGVV 31
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 236 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 120
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 32.3 bits (70), Expect = 0.29
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 182 CETGLAHT 159
CET L T
Sbjct: 252 CETQLVPT 259
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.9 bits (69), Expect = 0.38
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 182 CETGLAHT 159
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.9 bits (69), Expect = 0.38
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 182 CETGLAHT 159
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.9 bits (69), Expect = 0.38
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 182 CETGLAHT 159
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.5 bits (68), Expect = 0.51
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 182 CETGLAHT 159
CET L T
Sbjct: 447 CETQLVLT 454
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 315 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 467
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.5 bits (68), Expect = 0.51
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 182 CETGLAHT 159
CET L T
Sbjct: 288 CETQLVLT 295
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 31.5 bits (68), Expect = 0.51
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 182 CETGLAHT 159
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.1 bits (67), Expect = 0.67
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 293 LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 159
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 343 TIPCSMGYLRVRIPLLLCASSPTYESFCPIPTITP 239
T P S+ RVR L L S+P Y S CP +TP
Sbjct: 592 TCPRSIVTPRVRARLSLHVSAPDYHSTCPRSIVTP 626
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 325 GYLRVRIPLLLCASSPTYESFCPIPTITP*WRGLPTI 215
G L +P A+SP Y S P+PT TP PTI
Sbjct: 1210 GALFTPLPHETSATSPPYTSASPVPTTTPSASSSPTI 1246
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 521 PSKPCSRCTRPVVPP 565
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 182 CETGLAHT 159
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 182 CETGLAHT 159
CET L T
Sbjct: 61 CETQLVLT 68
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 325 GYLRVRIPLLLCASSPTYESFCPIPTITP*WRGLPT 218
G + +++ LLL +SSP + S PI TP +GL T
Sbjct: 275 GVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -3
Query: 299 FALCLVSYV--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 135
FA CL V V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 134 GNFFVAHLE 108
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_59022| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.4e-13)
Length = 751
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 266 GLVRRRRGTEQKRYPDPQIPHRT 334
G +R+ RG E YPDP+I +T
Sbjct: 656 GYLRKSRGEEDSYYPDPEIKPKT 678
>SB_11513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 266 GLVRRRRGTEQKRYPDPQIPHRT 334
G +R+ RG E YPDP+I +T
Sbjct: 17 GYLRKSRGEEDSYYPDPEIKPKT 39
>SB_1631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 239 GRDGRYGTEGLVRRRRGTEQKRYPDPQIPHRTRN 340
G+ G T+G+ R+RR E Y D I H R+
Sbjct: 574 GQQGEDITKGMNRKRRSIEDSAYSDDIIEHEERS 607
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 293 LCLVSYVRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 159
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 266 GLVRRRRGTEQKRYPDPQIPHRT 334
G +R+ RG E YPDP+I +T
Sbjct: 992 GYLRKSRGEEDGYYPDPEIKPKT 1014
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 288 PRLLRTSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 118
P L ++P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = +2
Query: 236 SGRDGR-YGTE----GLVRRRRGTEQKRYPDPQIPHRTRNRH 346
SGRDGR G E G R +E+KR+P P P R+ H
Sbjct: 607 SGRDGRDTGRESWRDGARDSGRDSERKRWPRPPSPEPARHSH 648
>SB_23026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/85 (25%), Positives = 34/85 (40%)
Frame = +3
Query: 315 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 494
L+ ++H + EK H EL +A +E T A + + E
Sbjct: 91 LQEALDHEAKLRKESEEK--HSNAIKELLLAVKEATEKATSAQQDLVSEHSSDQVTTVEL 148
Query: 495 FNTPAHVRRHPSRALAVRVRSYHRY 569
T AHV R SR + ++ R HR+
Sbjct: 149 TRTSAHVTRMTSRIILIQKRFSHRF 173
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 218 RGKAPPSGRDGRYGTEGLVRRRRGTEQKRYPDP--QIPHRTRN 340
+G+ P G G G G + + K +PDP ++PH RN
Sbjct: 124 QGQPGPEGPQGPAGPSGADGPQGPEDLKAHPDPLEKVPHHLRN 166
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 226 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 116
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = -1
Query: 304 PLLLCASSPTYESFCPIPTITP*WRGLPTIEGNTARGASSPAKP 173
P C S P F +P P W LP+ E N G SS A P
Sbjct: 2225 PRAECESDPVDSLFSEVP---PEWSTLPSPEQNAFGGDSSWASP 2265
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,579,197
Number of Sequences: 59808
Number of extensions: 501408
Number of successful extensions: 1652
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1644
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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