Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12g17
(574 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.1
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 6.6
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 6.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 6.6
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 6.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 8.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.7
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 8.7
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 396 LRVAPEEHPVLLTEAPLNPKANREKM 473
LR+ P H V+ T +NP + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 209 PLDRGKAPPSGRDGRYGTEGLVRRRRG 289
PL+RG+ SG+ Y +R R G
Sbjct: 35 PLERGELTNSGKMREYQLGQFLRERYG 61
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 209 PLDRGKAPPSGRDGRYGTEGLVRRRRG 289
PL+RG+ SG+ Y +R R G
Sbjct: 50 PLERGELTNSGKMREYQLGQFLRERYG 76
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE++R +P+I N +
Sbjct: 291 KYGETSKERSRDRTERERSKEPKIISSLSNNY 322
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 159 GMCKAGFAGD 188
GMCK G +GD
Sbjct: 130 GMCKEGISGD 139
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 58 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 89
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 58 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 89
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 58 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 89
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 58 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 89
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 291 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 291 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 291 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 291 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 291 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 251 RYGTEGLVRRRRGTEQKRYPDPQIPHRTRNRH 346
+YG R R TE+++ +P+I N +
Sbjct: 280 KYGETSKERSRNRTEREKSKEPKIISSLSNNY 311
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 218 DRGEHGARSIISCETGLA 165
D GEH ++ E GLA
Sbjct: 130 DPGEHNGDTVTDVEAGLA 147
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 218 DRGEHGARSIISCETGLA 165
D GEH ++ E GLA
Sbjct: 125 DPGEHNGDTVTDVEAGLA 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,725
Number of Sequences: 438
Number of extensions: 4208
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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