Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12g17
(574 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 263 5e-71
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 263 7e-71
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 263 7e-71
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 261 2e-70
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 260 4e-70
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 260 4e-70
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 256 6e-69
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 256 6e-69
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 256 6e-69
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 239 9e-64
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 191 2e-49
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 160 7e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 136 7e-33
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 110 6e-25
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 5e-23
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 101 3e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 74 8e-14
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 69 3e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 63 1e-10
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.077
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 29 2.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.2
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 28 5.1
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 28 5.1
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.1
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.1
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 6.7
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.7
At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q2... 27 6.7
At3g05750.1 68416.m00646 expressed protein 27 6.7
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 8.9
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 263 bits (645), Expect = 5e-71
Identities = 119/129 (92%), Positives = 124/129 (96%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 483 MFETFNTPA 509
MFETFNTPA
Sbjct: 125 MFETFNTPA 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIV 154
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 263 bits (644), Expect = 7e-71
Identities = 119/129 (92%), Positives = 123/129 (95%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 483 MFETFNTPA 509
MFETFNTPA
Sbjct: 125 MFETFNTPA 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIV 154
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 263 bits (644), Expect = 7e-71
Identities = 119/129 (92%), Positives = 123/129 (95%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 483 MFETFNTPA 509
MFETFNTPA
Sbjct: 125 MFETFNTPA 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIV 154
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 261 bits (640), Expect = 2e-70
Identities = 118/129 (91%), Positives = 123/129 (95%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 483 MFETFNTPA 509
MFETFN PA
Sbjct: 125 MFETFNVPA 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIV 154
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 260 bits (638), Expect = 4e-70
Identities = 117/129 (90%), Positives = 122/129 (94%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 483 MFETFNTPA 509
MFETFN PA
Sbjct: 125 MFETFNAPA 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIV 154
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 260 bits (638), Expect = 4e-70
Identities = 117/129 (90%), Positives = 122/129 (94%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 483 MFETFNTPA 509
MFETFN PA
Sbjct: 125 MFETFNAPA 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIV 154
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 256 bits (628), Expect = 6e-69
Identities = 112/129 (86%), Positives = 123/129 (95%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 483 MFETFNTPA 509
MFETFN+PA
Sbjct: 125 MFETFNSPA 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIV 154
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 256 bits (628), Expect = 6e-69
Identities = 112/129 (86%), Positives = 123/129 (95%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 483 MFETFNTPA 509
MFETFN+PA
Sbjct: 125 MFETFNSPA 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIV 154
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 256 bits (628), Expect = 6e-69
Identities = 112/129 (86%), Positives = 123/129 (95%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 483 MFETFNTPA 509
MFETFN+PA
Sbjct: 125 MFETFNSPA 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYVAIQAVLSLYASGRTTGIV
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIV 154
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 239 bits (585), Expect = 9e-64
Identities = 103/129 (79%), Positives = 120/129 (93%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 302
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 303 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 483 MFETFNTPA 509
MFE+F P+
Sbjct: 126 MFESFAFPS 134
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MY+ IQAVLSLY+SGRTTGIV
Sbjct: 133 PSMYIGIQAVLSLYSSGRTTGIV 155
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 191 bits (466), Expect = 2e-49
Identities = 87/124 (70%), Positives = 100/124 (80%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 317
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 318 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 497
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 498 NTPA 509
+ PA
Sbjct: 119 DVPA 122
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MYV++Q+VL LY+SGRTTG+V
Sbjct: 121 PAMYVSMQSVLYLYSSGRTTGVV 143
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 160 bits (388), Expect = 7e-40
Identities = 68/88 (77%), Positives = 81/88 (92%)
Frame = +3
Query: 246 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 425
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 426 LLTEAPLNPKANREKMTQIMFETFNTPA 509
LLTEAPLNPKA+REKMTQIMFETF P+
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPS 88
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P MY+ +QA LSL+ASGRTTG V
Sbjct: 87 PSMYIGMQAALSLHASGRTTGTV 109
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 136 bits (330), Expect = 7e-33
Identities = 60/123 (48%), Positives = 82/123 (66%), Gaps = 2/123 (1%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 311
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 312 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 491
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 492 TFN 500
+N
Sbjct: 127 KYN 129
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIV 573
+++ IQAVL+LYA G TG+V
Sbjct: 133 VFIQIQAVLTLYAQGLLTGLV 153
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 110 bits (265), Expect = 6e-25
Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 22/151 (14%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 272
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 273 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 416
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 417 HPVLLTEAPLNPKANREKMTQIMFETFNTPA 509
HP+LL E PLN + REK ++MFE + PA
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPA 155
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 5e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 257
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 258 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 434
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 435 EAPLNPKANREK 470
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 101 bits (242), Expect = 3e-22
Identities = 61/145 (42%), Positives = 81/145 (55%), Gaps = 21/145 (14%)
Frame = +3
Query: 135 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 260
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 261 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 431
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 432 TEAPLNPKANREKMTQIMFETFNTP 506
TE+PL P +RE +I+FETFN P
Sbjct: 125 TESPLTPPESREYTGEILFETFNVP 149
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 73.7 bits (173), Expect = 8e-14
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 317
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 318 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 480 IMFETFNTPA 509
++FET+ PA
Sbjct: 138 LLFETYGVPA 147
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 68.5 bits (160), Expect = 3e-12
Identities = 39/130 (30%), Positives = 64/130 (49%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 317
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 318 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 497
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 498 NTPAHVRRHP 527
+ HP
Sbjct: 122 GFSSLYIAHP 131
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 62.9 bits (146), Expect = 1e-10
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +3
Query: 135 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 311
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 312 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 488
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 489 ETFN 500
ETFN
Sbjct: 113 ETFN 116
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.077
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 259 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 122
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 407 PRGTPCPAH*GSPQPQGQQREDDPDHVRNIQHARPCTSPSKPCSRCTRPVVPP 565
P G C P+P RE + + H + ++P PC RC PV P
Sbjct: 522 PCGHKCKLRCHGPRPP-PNREFILKPTKKMLHIQAESTPGSPCPRCPEPVWRP 573
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 282 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 461
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 462 REK 470
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 282 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 461
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 462 REK 470
REK
Sbjct: 225 REK 227
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P + QAVL+LYA+ RT+GIV
Sbjct: 232 PAVCAVNQAVLALYAARRTSGIV 254
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 505 PPMYVAIQAVLSLYASGRTTGIV 573
P + QAVL+LYA+ RT+GIV
Sbjct: 232 PAVCAVNQAVLALYAARRTSGIV 254
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 370 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 281
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 362 HVIPVSDDSVFDGVFEGQDTSFALCLVSYVRVLLSH 255
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 421 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTYESF 263
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 235 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 113
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g12770.1 68417.m02004 auxilin-related low similarity to
SP|Q27974 Auxilin {Bos taurus}
Length = 909
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 294 SVPRLLRTSPSVPYRPSRPDGGAFPRSRGTRR 199
SVPR RT+P P++ S GG+F SR + R
Sbjct: 677 SVPRQ-RTNPPDPFQDSWNKGGSFESSRPSSR 707
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 299
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 300 RG--ILTLKYPIEHGIVTNWDDMEK 368
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 431 H*GSPQPQGQQREDDPDHVRN 493
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 348 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 497
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,920,930
Number of Sequences: 28952
Number of extensions: 318565
Number of successful extensions: 1002
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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