Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12g12
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 32 0.25
AF040649-3|AAK72087.1| 317|Caenorhabditis elegans Serpentine re... 29 3.1
Z82083-7|CAB04969.2| 274|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL132876-24|CAE17987.1| 405|Caenorhabditis elegans Hypothetical... 28 5.4
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 27 7.1
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 27 7.1
U49944-4|AAA93419.1| 457|Caenorhabditis elegans Neuropeptide re... 27 7.1
AC024882-14|AAF60927.1| 360|Caenorhabditis elegans Hypothetical... 27 7.1
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 27 9.4
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 27 9.4
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical protein
T14G8.3b protein.
Length = 905
Score = 32.3 bits (70), Expect = 0.25
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Frame = +2
Query: 122 ENKYTRSANEKNDDAKVDFRT------LEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDL 283
E K T EKN+DA + +T +EKP + K + KA++ +K +D
Sbjct: 563 EKKKTEGEEEKNEDAAGEEKTEEKTEEVEKPVVVKKTKPVEPKAKKINVALTIKETKTDN 622
Query: 284 MLHDKEEIT-YKRFKSDGGDKEGLKEAELRRKLSNIMSVYGLLEHFDPKADRQKDHPAFN 460
+ ++EE+T K+ D KE KE R + N + GLL +D A R +D +
Sbjct: 623 IDLNEEEVTAAKKVLGDFEQKE--KEKHDREEAMNRLE--GLL--YD-LAVRLEDGEEYA 675
Query: 461 SAMDDHINRSIFKDKKLNMLWSKAEFSGFTAEE 559
+ ++I ++ + LW + + S T +E
Sbjct: 676 EYATEEEKKAILEEVAVLKLWFEDDVSLETKKE 708
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical protein
T14G8.3a protein.
Length = 921
Score = 32.3 bits (70), Expect = 0.25
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Frame = +2
Query: 122 ENKYTRSANEKNDDAKVDFRT------LEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDL 283
E K T EKN+DA + +T +EKP + K + KA++ +K +D
Sbjct: 579 EKKKTEGEEEKNEDAAGEEKTEEKTEEVEKPVVVKKTKPVEPKAKKINVALTIKETKTDN 638
Query: 284 MLHDKEEIT-YKRFKSDGGDKEGLKEAELRRKLSNIMSVYGLLEHFDPKADRQKDHPAFN 460
+ ++EE+T K+ D KE KE R + N + GLL +D A R +D +
Sbjct: 639 IDLNEEEVTAAKKVLGDFEQKE--KEKHDREEAMNRLE--GLL--YD-LAVRLEDGEEYA 691
Query: 461 SAMDDHINRSIFKDKKLNMLWSKAEFSGFTAEE 559
+ ++I ++ + LW + + S T +E
Sbjct: 692 EYATEEEKKAILEEVAVLKLWFEDDVSLETKKE 724
>AF040649-3|AAK72087.1| 317|Caenorhabditis elegans Serpentine
receptor, class i protein36 protein.
Length = 317
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 44 LHKVFTMNTHLMIFVFISLLMSGIVC 121
L KVF + +H ++ V+ SLL+S IVC
Sbjct: 82 LVKVFNIYSHYLLAVWTSLLISEIVC 107
>Z82083-7|CAB04969.2| 274|Caenorhabditis elegans Hypothetical
protein ZK1010.3 protein.
Length = 274
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +2
Query: 224 WTKAQQRLTEPKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAE 364
W + R + ++ Y + H K ++ + D DK+G+K+A+
Sbjct: 206 WRSVEDRKNARECETAYVKMYQHSKVDLKNRHIAIDVKDKKGVKKAQ 252
>AL132876-24|CAE17987.1| 405|Caenorhabditis elegans Hypothetical
protein Y105E8A.29 protein.
Length = 405
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +2
Query: 332 GGDKEGLKEAELRRKLSNIMSVY--GLLEHFDPKA-DRQKDHPAFNSAMDDHI-NRSIFK 499
GGD EGL+ L+R+ SN+ S + E P+A +K F S + ++ F
Sbjct: 142 GGD-EGLRNGSLKRRASNVSSSFFASAQERLRPRAKSLKKQRKTFFSKLFTFFKKKNFFL 200
Query: 500 DKKLNMLWSK-AEFSG 544
+K ++ K +EF G
Sbjct: 201 EKYEKKIFKKISEFPG 216
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +2
Query: 128 KYTRSANEKNDDAKVDFRTLEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDLMLHDKEEI 307
K + EKN + + N+ L A+ +L E + L+++ E
Sbjct: 743 KELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEE 802
Query: 308 TYKRFK---SDGGDKEGLKEAELRRKLSN 385
KR++ S+ +GL ELR+K+ +
Sbjct: 803 NEKRYEQLVSESDSSDGLSYTELRKKVED 831
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +2
Query: 128 KYTRSANEKNDDAKVDFRTLEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDLMLHDKEEI 307
K + EKN + + N+ L A+ +L E + L+++ E
Sbjct: 729 KELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEE 788
Query: 308 TYKRFK---SDGGDKEGLKEAELRRKLSN 385
KR++ S+ +GL ELR+K+ +
Sbjct: 789 NEKRYEQLVSESDSSDGLSYTELRKKVED 817
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 338 DKEGLKEAELRRKLSNIMSVYGLLEHFDPKADRQKDHPA--FNSAMDDHIN 484
++EG+ EA++ KL L +H D KDH + M D +N
Sbjct: 551 EEEGMVEAKIFEKLVTARRALSLFQHHDGVTGTAKDHVVLDYGQKMIDALN 601
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 338 DKEGLKEAELRRKLSNIMSVYGLLEHFDPKADRQKDHPA--FNSAMDDHIN 484
++EG+ EA++ KL L +H D KDH + M D +N
Sbjct: 549 EEEGMVEAKIFEKLVTARRALSLFQHHDGVTGTAKDHVVLDYGQKMIDALN 599
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +2
Query: 128 KYTRSANEKNDDAKVDFRTLEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDLMLHDKEEI 307
K + EKN + + N+ L A+ +L E + L+++ E
Sbjct: 729 KELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEE 788
Query: 308 TYKRFK---SDGGDKEGLKEAELRRKLSN 385
KR++ S+ +GL ELR+K+ +
Sbjct: 789 NEKRYEQLVSESDSSDGLSYTELRKKVED 817
>U49944-4|AAA93419.1| 457|Caenorhabditis elegans Neuropeptide
receptor family protein1 protein.
Length = 457
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 266 SLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNI 388
S+Y ++HD + + + GG E LKE EL N+
Sbjct: 372 SVYKTKIVHDTKHLNGRAKIGGGGSHEALKERELNSCSENL 412
>AC024882-14|AAF60927.1| 360|Caenorhabditis elegans Hypothetical
protein Y9C9A.1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 KLNLLWTKAQQRLTEPKLKSLYSDLMLHDK-EEITY 313
K+N TK +R+T +L+ + D H++ E+IT+
Sbjct: 294 KVNTALTKTSERITTSQLQRMIQDATTHERIEKITF 329
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 251 EPKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNIMSVYG 403
E + L + H ++ + +K FK +GGD++GL+ SN+ V G
Sbjct: 137 EETWRQLIRSAIRHVEQNVCFK-FKENGGDRDGLRYYRGNGCWSNVGRVGG 186
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 251 EPKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNIMSVYG 403
E + L + H ++ + +K FK +GGD++GL+ SN+ V G
Sbjct: 137 EETWRQLIRSAIRHVEQNVCFK-FKENGGDRDGLRYYRGNGCWSNVGRVGG 186
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 251 EPKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNIMSVYG 403
E + L + H ++ + +K FK +GGD++GL+ SN+ V G
Sbjct: 137 EETWRQLIRSAIRHVEQNVCFK-FKENGGDRDGLRYYRGNGCWSNVGRVGG 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,100,759
Number of Sequences: 27780
Number of extensions: 200516
Number of successful extensions: 551
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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