Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g11
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.8  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 478 KNKDVEDKPALIN 516
           KN+D+ED+P + N
Sbjct: 183 KNEDLEDQPVVYN 195


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 518 VFISAGLSSTSLFFSVTVPDNGE*ISLAA 432
           V +S G    S++ +  + ++GE ISLA+
Sbjct: 42  VVLSLGSFIVSVYLTTKIDNDGESISLAS 70


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 478 KNKDVE-DKPALINTSCYDKGWLFRLKIIKQSEINDL 585
           KN+  E  K   I TSC   G L+R+       +ND+
Sbjct: 187 KNRFKELQKYLKIETSCRYVGTLYRILTTMMEMVNDI 223


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 487 DVEDKPALINTSCYDKGWLFR 549
           DVE    L+N     +GW+ R
Sbjct: 233 DVEGSQKLLNVDASIRGWIER 253


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 312 TYIFVYCNPFMSISIFP 262
           T +F +C  + SISI P
Sbjct: 548 TIVFAFCYCYYSISIRP 564


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,655
Number of Sequences: 336
Number of extensions: 4263
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)