Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g11
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075433-1|AAL68248.1|  165|Drosophila melanogaster LP05579p pro...   172   3e-43
AF203725-1|AAF13277.1|  165|Drosophila melanogaster pumpless pro...   172   3e-43
AE014296-3507|AAF51697.3|  165|Drosophila melanogaster CG7758-PA...   172   3e-43
BT028838-1|ABJ17086.1|   74|Drosophila melanogaster RT01101p pro...    32   0.88 
BT028808-1|ABJ17076.1|   74|Drosophila melanogaster RT01001p pro...    32   0.88 

>AY075433-1|AAL68248.1|  165|Drosophila melanogaster LP05579p
           protein.
          Length = 165

 Score =  172 bits (419), Expect = 3e-43
 Identities = 76/124 (61%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
 Frame = +1

Query: 262 RKYTDRHEWV-TIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKAA 438
           R+YT++HEWV  +      VG+S YAQE+LGDVVFAQLP+PGT+LK  DECGALESVKAA
Sbjct: 41  RRYTNKHEWVEVVSGSNAIVGISSYAQEALGDVVFAQLPEPGTELKQDDECGALESVKAA 100

Query: 439 SEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLE 618
           SE+YSP+SG V EKN +VED PAL+N+SCY+KGWLF++ +    E+  LMTE++YK FL 
Sbjct: 101 SEVYSPVSGKVIEKNAEVEDTPALVNSSCYEKGWLFKVDLKNPKELEALMTEDQYKAFLS 160

Query: 619 TDAE 630
           +  +
Sbjct: 161 SSGD 164


>AF203725-1|AAF13277.1|  165|Drosophila melanogaster pumpless
           protein protein.
          Length = 165

 Score =  172 bits (419), Expect = 3e-43
 Identities = 76/124 (61%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
 Frame = +1

Query: 262 RKYTDRHEWV-TIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKAA 438
           R+YT++HEWV  +      VG+S YAQE+LGDVVFAQLP+PGT+LK  DECGALESVKAA
Sbjct: 41  RRYTNKHEWVEVVSGSNAIVGISSYAQEALGDVVFAQLPEPGTELKQDDECGALESVKAA 100

Query: 439 SEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLE 618
           SE+YSP+SG V EKN +VED PAL+N+SCY+KGWLF++ +    E+  LMTE++YK FL 
Sbjct: 101 SEVYSPVSGKVIEKNAEVEDTPALVNSSCYEKGWLFKVDLKNPKELEALMTEDQYKAFLS 160

Query: 619 TDAE 630
           +  +
Sbjct: 161 SSGD 164


>AE014296-3507|AAF51697.3|  165|Drosophila melanogaster CG7758-PA
           protein.
          Length = 165

 Score =  172 bits (419), Expect = 3e-43
 Identities = 76/124 (61%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
 Frame = +1

Query: 262 RKYTDRHEWV-TIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKAA 438
           R+YT++HEWV  +      VG+S YAQE+LGDVVFAQLP+PGT+LK  DECGALESVKAA
Sbjct: 41  RRYTNKHEWVEVVSGSNAIVGISSYAQEALGDVVFAQLPEPGTELKQDDECGALESVKAA 100

Query: 439 SEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLE 618
           SE+YSP+SG V EKN +VED PAL+N+SCY+KGWLF++ +    E+  LMTE++YK FL 
Sbjct: 101 SEVYSPVSGKVIEKNAEVEDTPALVNSSCYEKGWLFKVDLKNPKELEALMTEDQYKAFLS 160

Query: 619 TDAE 630
           +  +
Sbjct: 161 SSGD 164


>BT028838-1|ABJ17086.1|   74|Drosophila melanogaster RT01101p
           protein.
          Length = 74

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -1

Query: 443 SLAAFTLSKAPHSSPALRSVPGSGSCAKTTSPRDSWAYSLTPTVPISLSIVTH 285
           ++AA +      S P + +   S SCA +T  R SW  S  P +P   S + H
Sbjct: 22  AIAAASRRMRSPSGPPIWNARTSSSCAGSTPSRSSWPPSPPPKLPPPKSFIDH 74


>BT028808-1|ABJ17076.1|   74|Drosophila melanogaster RT01001p
           protein.
          Length = 74

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -1

Query: 443 SLAAFTLSKAPHSSPALRSVPGSGSCAKTTSPRDSWAYSLTPTVPISLSIVTH 285
           ++AA +      S P + +   S SCA +T  R SW  S  P +P   S + H
Sbjct: 22  AIAAASRRMRSPSGPPIWNARTSSSCAGSTPSRSSWPPSPPPKLPPPKSFIDH 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,546,195
Number of Sequences: 53049
Number of extensions: 700231
Number of successful extensions: 1684
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1681
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)