Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g11
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical pr...   154   7e-38
Z71263-2|CAA95820.1|  146|Caenorhabditis elegans Hypothetical pr...   152   2e-37
AL031633-14|CAA21032.1|  903|Caenorhabditis elegans Hypothetical...    32   0.35 
AL031633-13|CAA21027.1|  951|Caenorhabditis elegans Hypothetical...    32   0.35 
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical...    32   0.35 
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam...    32   0.35 
AJ132700-1|CAA10736.1|  952|Caenorhabditis elegans centaurin gam...    32   0.35 
Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical pr...    31   0.61 
U64841-1|AAB04845.2|  357|Caenorhabditis elegans Serpentine rece...    29   2.5  
U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z83217-1|CAB05681.1|  376|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81047-7|CAB02834.1|  297|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z77655-3|CAB01134.1|  426|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AC024881-7|AAK71417.1|  310|Caenorhabditis elegans Serpentine re...    27   9.9  

>Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical
           protein D1025.2 protein.
          Length = 148

 Score =  154 bits (373), Expect = 7e-38
 Identities = 65/133 (48%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
 Frame = +1

Query: 235 LKYSTGGSSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECG 414
           +++++ G  R YT +HEW+ +++ +GTVG++++A E LGDVVF +LP+ G +++ GD  G
Sbjct: 17  IRFASNG--RLYTKKHEWIVVNQSVGTVGITDFATEQLGDVVFIELPEAGVEIEKGDSTG 74

Query: 415 ALESVKAASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTE 594
           A+ESVKAAS+IY+P+SG + EKN  +ED+P +IN S  +KGWL+RL+I    ++N+L+TE
Sbjct: 75  AVESVKAASDIYAPVSGKILEKNTKLEDEPGIINKSPLEKGWLYRLEITSNEQLNELLTE 134

Query: 595 EEYKKF-LETDAE 630
           E+Y KF  E +AE
Sbjct: 135 EQYNKFKSEEEAE 147


>Z71263-2|CAA95820.1|  146|Caenorhabditis elegans Hypothetical
           protein F52A8.5 protein.
          Length = 146

 Score =  152 bits (369), Expect = 2e-37
 Identities = 64/119 (53%), Positives = 91/119 (76%)
 Frame = +1

Query: 256 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 435
           S R YT +HEWV ++  +GTVG++++A E LGDVVF +LPD GT++  GD  GA+ESVKA
Sbjct: 20  SGRLYTKKHEWVLVENGVGTVGITDFATEQLGDVVFIELPDEGTEISKGDSTGAVESVKA 79

Query: 436 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKF 612
           AS+IY+P+SGTVT+KN  +E++  LIN S ++KGWL++LK+    E+  L+ EE+Y KF
Sbjct: 80  ASDIYAPISGTVTQKNVKLEEEAGLINKSPFEKGWLYKLKVKSADELEKLLNEEQYAKF 138


>AL031633-14|CAA21032.1|  903|Caenorhabditis elegans Hypothetical
           protein Y39A1A.15c protein.
          Length = 903

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 398 ALRSVPGSGSCAKTTSPRDSWA 333
           ALRS+PG+G CA   +P   WA
Sbjct: 623 ALRSIPGNGRCADCGNPSSEWA 644


>AL031633-13|CAA21027.1|  951|Caenorhabditis elegans Hypothetical
           protein Y39A1A.15b protein.
          Length = 951

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 398 ALRSVPGSGSCAKTTSPRDSWA 333
           ALRS+PG+G CA   +P   WA
Sbjct: 671 ALRSIPGNGRCADCGNPSSEWA 692


>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
           protein Y39A1A.15a protein.
          Length = 1107

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 398 ALRSVPGSGSCAKTTSPRDSWA 333
           ALRS+PG+G CA   +P   WA
Sbjct: 827 ALRSIPGNGRCADCGNPSSEWA 848


>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
           1B protein.
          Length = 1107

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 398 ALRSVPGSGSCAKTTSPRDSWA 333
           ALRS+PG+G CA   +P   WA
Sbjct: 827 ALRSIPGNGRCADCGNPSSEWA 848


>AJ132700-1|CAA10736.1|  952|Caenorhabditis elegans centaurin gamma
           1A protein.
          Length = 952

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 398 ALRSVPGSGSCAKTTSPRDSWA 333
           ALRS+PG+G CA   +P   WA
Sbjct: 672 ALRSIPGNGRCADCGNPSSEWA 693


>Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical
           protein Y6G8.1 protein.
          Length = 323

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -3

Query: 666 SLYLIQLKLFWFLSICFQKFLVLFFSHEIIYLALLNYFQPKQPSFVI 526
           SL ++ L LF+ L IC Q F +L F   I    L  YF P    F+I
Sbjct: 98  SLQILMLFLFYVLYICMQAFHLLLFFLSIGRFTL--YFWPSSEKFLI 142


>U64841-1|AAB04845.2|  357|Caenorhabditis elegans Serpentine
           receptor, class t protein13 protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 369 LCKNNITKRFLGIFANPNCTY-IFVYCNPFMSISIFP**STCAVLQA 232
           LC N++T  +LG+     C Y +FV+C   + +  +     C +L A
Sbjct: 84  LCVNSVTTGYLGMIGASFCNYPLFVFCAGSIGLGSWMGGCVCCILLA 130


>U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical
           protein C35D10.7b protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 490 VEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLETDAEKPE 639
           V+D P+++  +   K W    +I+KQ     L   EE +K LE D   P+
Sbjct: 378 VKDVPSVVQLAKECKMWSAFERILKQYNFEPLKVFEELQKMLEKDYFLPK 427


>U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical
           protein C35D10.7a protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 490 VEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLETDAEKPE 639
           V+D P+++  +   K W    +I+KQ     L   EE +K LE D   P+
Sbjct: 429 VKDVPSVVQLAKECKMWSAFERILKQYNFEPLKVFEELQKMLEKDYFLPK 478


>Z83217-1|CAB05681.1|  376|Caenorhabditis elegans Hypothetical
           protein C10C6.2 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -2

Query: 223 SMFV*CLTVNDALICKFSLFVISISV 146
           ++FV CL  +D L+C FSL + +IS+
Sbjct: 61  TVFVGCLAGSDLLMCLFSLPITAISI 86


>Z81047-7|CAB02834.1|  297|Caenorhabditis elegans Hypothetical
           protein C41G6.9 protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 175 FSLFVISISVLPFYCQYFL*ITNRILWYLNVIWNFRCAS 59
           FS F I    LP Y  YFL   +R+L    V+  F C S
Sbjct: 73  FSFFAIPALNLPIYAGYFLGF-SRVLGVPTVVTTFLCYS 110


>Z77655-3|CAB01134.1|  426|Caenorhabditis elegans Hypothetical
           protein C56A3.3 protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = +1

Query: 379 PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGW 540
           P  DL   D+    ES  AAS I+ PL    T +N    D P + +    D GW
Sbjct: 372 PSLDLNRSDQASFAESESAASPIWQPL----TTRNLPNVDWPNIDDD--IDSGW 419


>AC024881-7|AAK71417.1|  310|Caenorhabditis elegans Serpentine
           receptor, class sx protein3 protein.
          Length = 310

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 666 SLYLIQLKLFWFLSICFQKFLVLFFSHEIIYLALLNYFQP 547
           S Y+  L +  F++I     +++FF   +++ ALL Y QP
Sbjct: 219 SWYMCTLGVDLFVAIGMTGSVLVFFQSNMVFFALLCYTQP 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,712,621
Number of Sequences: 27780
Number of extensions: 382079
Number of successful extensions: 988
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)