Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12g10
(540 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 149 5e-35
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 139 3e-32
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 139 3e-32
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 130 3e-29
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 129 3e-29
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 123 3e-27
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 113 2e-24
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 108 7e-23
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 108 7e-23
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 107 2e-22
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 106 4e-22
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 102 5e-21
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 102 6e-21
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 102 6e-21
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 99 6e-20
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 98 1e-19
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 96 4e-19
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 96 4e-19
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 90 3e-17
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 89 5e-17
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 87 2e-16
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 87 3e-16
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 84 2e-15
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 84 2e-15
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 82 9e-15
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 81 1e-14
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 77 2e-13
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 76 5e-13
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 69 5e-11
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 57 3e-07
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 56 5e-07
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 46 6e-04
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 42 0.009
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n... 32 9.7
UniRef50_A6S452 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
UniRef50_A6QV20 Cluster: Predicted protein; n=1; Ajellomyces cap... 32 9.7
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 149 bits (360), Expect = 5e-35
Identities = 68/105 (64%), Positives = 83/105 (79%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
VPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RNGV P
Sbjct: 30 VPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMP 89
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
SHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 90 SHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
Score = 33.5 bits (73), Expect = 3.2
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 41 MRSVTVKDVEQDKIVKTVAAHLKKNGQ 121
M VTVKDV Q + V+ +AA LKK+G+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGK 27
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 139 bits (337), Expect = 3e-32
Identities = 59/105 (56%), Positives = 81/105 (77%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+PE +D+VKTARFKEL PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P
Sbjct: 53 LPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRP 112
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 113 PHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 139 bits (337), Expect = 3e-32
Identities = 59/105 (56%), Positives = 81/105 (77%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+PE +D+VKTARFKEL PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P
Sbjct: 33 LPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRP 92
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 93 PHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 137
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 130 bits (313), Expect = 3e-29
Identities = 58/104 (55%), Positives = 76/104 (73%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
P+ +D+VKT KELAPYDPDW+YVR AAI RHIY+R VGV + K++GG G+ PS
Sbjct: 31 PQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPS 90
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
H SGS+ RK +QSLE + ++EK +GGR ++ QG+RDLDRI
Sbjct: 91 HHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRI 134
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 129 bits (312), Expect = 3e-29
Identities = 60/105 (57%), Positives = 78/105 (74%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+P+ D+VK + +LAPY+PDWFYVRCAAILRH+YIR P G+ + K F +KRNGV P
Sbjct: 30 LPDWTDVVKLSSANQLAPYNPDWFYVRCAAILRHLYIR-PTGLTGLCKAFSRKKRNGVKP 88
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
SH + GS+ RKA+Q +EAL L +K + GGR LT+ GRRDLDR+
Sbjct: 89 SHRSLAHGSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDRL 133
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 123 bits (296), Expect = 3e-27
Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
VPE DLVK KELAP D DW+YVR A++ R +YIRSP GV + +++G KR GVTP
Sbjct: 31 VPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGSNKRRGVTP 90
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 413
+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 91 NHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 113 bits (272), Expect = 2e-24
Identities = 53/109 (48%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+P D+VKTA FKE +P DPDW+Y+R A+I R +Y+R GV ++ K++GG R GV
Sbjct: 39 LPAWWDVVKTASFKEYSPADPDWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHR 98
Query: 309 SHFCRSSGSIARKALQSLEALKLVEK----VQDGGRILTTQGRRDLDRI 443
HF ++SG + R LQ LE +K+VEK V GGR +T+ G++DLDRI
Sbjct: 99 QHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRI 147
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 108 bits (260), Expect = 7e-23
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+P +D +KTA +ELAPYDPDW Y+R A+I R +YIR +G KI+G RKR G+ P
Sbjct: 37 IPPWVDTIKTAASRELAPYDPDWLYIRIASIARKLYIRGGIGTGEFRKIYGDRKRRGMKP 96
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 437
+SSG + R +LQ LE L + EK + GGR +T++G+ ++D
Sbjct: 97 CRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRITSKGQSEMD 139
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 108 bits (260), Expect = 7e-23
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+P+ D+ KTA ++EL P +PDW Y R A + R +YIR GV T ++FGG +RNGV P
Sbjct: 32 IPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRP 91
Query: 309 SHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRDLDRI 443
+HF +G R L+ L+ LK++E GGR +T GRRDLDRI
Sbjct: 92 NHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRI 137
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 107 bits (257), Expect = 2e-22
Identities = 51/104 (49%), Positives = 65/104 (62%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
PE VKT R KE P DW+Y R A+ILR +YI PVG++ + +GGRK G P
Sbjct: 29 PEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPE 88
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
F ++ GSI RKALQ LEA +EKV GR++T +GR LD+I
Sbjct: 89 RFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKI 132
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 106 bits (254), Expect = 4e-22
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+P +D VKT+ EL P D DW+YVR AA+ RHIY+R VGV + K+ G K G P
Sbjct: 104 IPGWVDTVKTSCSNELPPQDSDWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRP 163
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 443
+H +SGS+ RK +QSLE + ++E ++ GGR +T G+RDLDRI
Sbjct: 164 NHHVDASGSVDRKIIQSLEKIGVLEYDEEKGGRRITQAGQRDLDRI 209
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 102 bits (245), Expect = 5e-21
Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
P+ +D KT+ KELAP DPDWFY+R AA+LRH+Y GV + K++ +KRNG P+
Sbjct: 53 PKRLDYAKTSVAKELAPQDPDWFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNGSAPN 112
Query: 312 HFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQG 422
H CR+SG I R +Q LE++ +E+ ++ GR L+ +G
Sbjct: 113 HTCRASGKILRTIVQQLESIGFLEQDLKKHGRRLSRKG 150
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 102 bits (244), Expect = 6e-21
Identities = 49/102 (48%), Positives = 65/102 (63%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
PE VKT R KE P DPDW+Y+R A+ILR +Y+ PVGV + +GGR+ G P
Sbjct: 29 PEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGARPE 88
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 437
F + SG+I RK LQ LE LVEK ++ GR++T +GR +D
Sbjct: 89 RFRKGSGAIIRKILQQLEEAGLVEKTEE-GRVVTPEGRSLVD 129
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 102 bits (244), Expect = 6e-21
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
PE ++ VKT KE P +PDW+YVR AA+LR +YI PVGV ++ +GG+K G P
Sbjct: 29 PEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPE 88
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 440
F R SG+I R+ALQ LE L+++ ++ GR++T +GR LD+
Sbjct: 89 KFRRGSGAIIRRALQQLEESGLIKR-EENGRVITPEGRSFLDK 130
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 99.1 bits (236), Expect = 6e-20
Identities = 46/105 (43%), Positives = 66/105 (62%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+PE +D VKT KELAP +PDW Y+R AAI R +Y+ + +GV + + +G + P
Sbjct: 31 IPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYP 90
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
SH SG + R LQ LE + +V K+Q GR LT +GR+D+D+I
Sbjct: 91 SHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTKEGRKDMDKI 134
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 97.9 bits (233), Expect = 1e-19
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
P+ +D VKT+ KELAP DP WFY+R AAILRH+Y G+ + +++ RKR G P+
Sbjct: 53 PKWIDYVKTSCAKELAPQDPKWFYIRSAAILRHLYFHPDEGIGRLRRVYASRKRRGCAPN 112
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDG-GRILTTQG 422
H C +SG I R +Q LEA +EK +D GR L+ +G
Sbjct: 113 HTCPASGKIIRTIVQQLEANGFLEKSKDNKGRRLSRRG 150
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 96.3 bits (229), Expect = 4e-19
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+PE +D VKTA KEL P + DW Y+R A+ILRH+Y+R VGV ++K +G ++RNG
Sbjct: 43 MPEWVDHVKTASSKELPPQNSDWLYIRAASILRHLYVRPNVGVGALSKFYGRKQRNGTAR 102
Query: 309 SHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRDLDRI 443
+H +S I R L L++L LVE G R L+ QG+R+LD I
Sbjct: 103 NHSAVASRGIIRYCLIQLQSLGLVEFNPNTGTRRLSPQGQRELDSI 148
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 96.3 bits (229), Expect = 4e-19
Identities = 46/104 (44%), Positives = 64/104 (61%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
PE VKT KE +P DW+Y+R A+I R +YI PVG++ + +GGRKR G P
Sbjct: 27 PEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPP 86
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
F + SG+I R AL LE L V+K ++ GR++T GR LD++
Sbjct: 87 KFRKGSGAIVRNALHQLEQLGFVKKTRE-GRVVTPMGRSFLDKV 129
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 89.8 bits (213), Expect = 3e-17
Identities = 45/96 (46%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +3
Query: 153 KTARFKELAPYDPDWFYVRCAAILRHIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFCRSS 329
KT KE P D DW+YVR A+ILR +Y P+G++T I+GGR+ G P HF ++
Sbjct: 37 KTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAG 96
Query: 330 GSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 437
GS+ RK LQ LE LV KV GR ++ GR LD
Sbjct: 97 GSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLD 132
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 89.4 bits (212), Expect = 5e-17
Identities = 40/104 (38%), Positives = 63/104 (60%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
P + VKT + P + DW++ RCA+I+R IY+ P+G+ + K +GG K +G +
Sbjct: 28 PSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGYGAA 87
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
H + G+I R A+ LE L +EKV+ GRI++ QG + LDR+
Sbjct: 88 HHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIVSKQGMQKLDRL 131
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 87.4 bits (207), Expect = 2e-16
Identities = 52/105 (49%), Positives = 61/105 (58%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
VPE +D VK A+ KELAPY+ +WFY R A+ RH V P
Sbjct: 175 VPEWVDTVKLAKHKELAPYEENWFYTRAASTARH----------------------RVRP 212
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
SHF R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRI
Sbjct: 213 SHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 86.6 bits (205), Expect = 3e-16
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
P KT KE+ P DPDW++ R AA+LR +Y+ P+GV+ + +GG K G P+
Sbjct: 29 PAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPN 88
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 443
F + SGS+ RKALQ LEA L+ V D GR ++ G LD +
Sbjct: 89 AFRKGSGSVLRKALQQLEAAGLI--VHDKTGRKVSPAGMAFLDSV 131
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 84.2 bits (199), Expect = 2e-15
Identities = 42/105 (40%), Positives = 61/105 (58%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
VP +++K++ +E AP +PDW+Y+RCAA+LR IY+R VG ++K FG +K G P
Sbjct: 55 VPNCTEIMKSSHGRERAPQNPDWYYIRCAAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRP 114
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
H SS A +SL L LVE G+ LT +G + D +
Sbjct: 115 EHTVTSSTGPLHWACKSLTKLGLVEPGAQSGQRLTRKGHKFADSL 159
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 83.8 bits (198), Expect = 2e-15
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+PE +VKT KE +P D DW YVR AA+ R IY+R GV +T +FG NG
Sbjct: 82 IPEWASIVKTGLGKETSPIDQDWMYVRAAALARKIYVRGHWGVGNLTHMFGSVNDNGKHE 141
Query: 309 SHFCRSSGSIARKALQSLEALKLVEK-----VQDGGRILTTQGRRDLDRI 443
S SG + R LQ LE +K+++K ++ G RI+T +G++DL+RI
Sbjct: 142 S----GSGKVIRYLLQQLETIKVLKKDNKSLLKKGSRIVTKEGQQDLNRI 187
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 81.8 bits (193), Expect = 9e-15
Identities = 36/104 (34%), Positives = 61/104 (58%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
P+ + VKT + P D W++ RCA+++R IY+ P+G+ + +GG K G +
Sbjct: 22 PDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAA 81
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
+ ++ G+I R A+ LE L +EK+ GRI++ QG + LDR+
Sbjct: 82 NHRKAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKLDRL 125
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 81.4 bits (192), Expect = 1e-14
Identities = 39/103 (37%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
P+ + VKT + ++LAP D DW++++ ++ILR +YI +GV + + F ++R GV P+
Sbjct: 75 PKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQRRGVAPN 134
Query: 312 HFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQGRRDLD 437
H +SG I R LQ LE + VE+ + GR LTT+G ++
Sbjct: 135 HTSLASGKILRSILQQLENIGYVEQNPKKKGRRLTTKGENAIN 177
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 77.4 bits (182), Expect = 2e-13
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+PE T+ +ELAP D DW Y+R AA+ R +Y++ G+ T+ IFG K G
Sbjct: 34 IPEFTQWTTTSVARELAPQDSDWVYIRTAALARKVYLKPHTGISTLKHIFGSNKDRGNLR 93
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDG-----GRILTTQGRRDLDRI 443
+ G I R AL+SLE LK++ K ++ R++T +G +L+RI
Sbjct: 94 NKHQACHGKILRWALKSLEDLKIIRKDKNSATKKFSRVITKEGMTELNRI 143
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 76.2 bits (179), Expect = 5e-13
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
PE DLVKTA K+LAP + +W+Y+R AA+ R IY+ + + +G + P
Sbjct: 38 PEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYLHHDASLSGLAFHYGANMKAVTMPK 97
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
H +S + R LQ LE LV +V + GR LT +G++ LD+I
Sbjct: 98 HHHEASRKVIRTILQQLEKAGLV-RVAEKGRQLTPKGQKLLDQI 140
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 69.3 bits (162), Expect = 5e-11
Identities = 39/102 (38%), Positives = 52/102 (50%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
P + VKT KE P DW YVR A++LR +YI +G+ ++ +GG+ G
Sbjct: 29 PNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRY 88
Query: 312 HFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 437
H S SI R LE+ LV+K Q GR L+ QG LD
Sbjct: 89 HAASGSRSITRFLFHELESAGLVQKTQK-GRSLSPQGMSLLD 129
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/103 (25%), Positives = 58/103 (56%)
Frame = +3
Query: 129 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 308
+P +++ K++ K+ +P +W + R A+I+ YI +G + + +I+ G+K+
Sbjct: 29 IPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFYIYKKLGTRQLVRIYNGKKKG--RR 86
Query: 309 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 437
S SG I R +++ LE +K+++K + G L+ + + ++D
Sbjct: 87 SKKTNGSGKIIRFSIKELEKMKILKKDESGRFGLSKKAQNEID 129
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 56.0 bits (129), Expect = 5e-07
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Frame = +3
Query: 132 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN----G 299
P+ ++ K+ KEL P D++YVR A++LR + P+G++ + +G +KR
Sbjct: 39 PDWVEFAKSGAGKELPPEQEDFWYVRSASLLRKVAQNEPIGIERLATEYGSKKRGSNRYS 98
Query: 300 VTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 443
V P S + R +LQ+LE LV GR ++ G L +
Sbjct: 99 VRPGEHEGGSRKLIRASLQALEEDGLVTTAAGEGRRISDDGEAFLSEV 146
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 282 GRKRNGVTPSHFCRSSGSIARKALQSLEALK 374
GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
Score = 31.9 bits (69), Expect = 9.7
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 41 MRSVTVKDVEQDKIVKTVAAHLKK--NGQSQGT 133
M VTVKDV Q + V+ +AA LKK NG +Q +
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSPNGWTQSS 33
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 41.9 bits (94), Expect = 0.009
Identities = 27/100 (27%), Positives = 52/100 (52%)
Frame = -2
Query: 440 SVKVSSTLCGENATTVLNFLNKLQCLQRLQSLACNTA**PAEM*RCNSITFAPTEDLGDS 261
SV++S +L + A +L + Q LQ L+ A +T AE+ ++++ DLG
Sbjct: 25 SVQISLSLRCQFAAAILVLFHHFQPLQGLEDPAGHTLGASAEVAGHDAVSLTSPIDLGHG 84
Query: 260 LDSNR*ANVNMTKDGSTTHIEPIRVIRSQLFEASCLYKIH 141
+ + V + + GS++ +EP+ ++ S+LF L +H
Sbjct: 85 ANPSATPEVQVPRCGSSSRVEPVLIVGSKLFVLGQLDGVH 124
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 32.7 bits (71), Expect = 5.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 286 ANVMELHLHISAGHQAVLHARLCNRWRH 369
A +E H +AG + +HAR+ RWRH
Sbjct: 196 AGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n=3;
Marinomonas sp. MWYL1|Rep: Peptidoglycan-binding LysM
precursor - Marinomonas sp. MWYL1
Length = 963
Score = 31.9 bits (69), Expect = 9.7
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 141 MDLVKTARFKELAPYDPDWF-YVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 311
+DL+ R++ + + D F + R AA+ RH +G+ TK G+ N +TP+
Sbjct: 590 VDLIDKKRYQSITHFSFDVFGFSRGAALARHFVNALKMGLPDYTKHRSGKDTNRITPN 647
>UniRef50_A6S452 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 654
Score = 31.9 bits (69), Expect = 9.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 331 PDDLQKCEGVTPLRLRPPKILVTVLTP 251
PDD+++ E + P LRP ++L T + P
Sbjct: 453 PDDIERTENIPPQPLRPKRVLKTTIIP 479
>UniRef50_A6QV20 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 666
Score = 31.9 bits (69), Expect = 9.7
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 181 RMTLIGSMCVVLPSFVIFTFAHLLESRLSPRSSV 282
R+ LIGS+C + P+F +F+ AH + P++++
Sbjct: 20 RLALIGSVCQLRPAFSLFSGAHAHHTSTGPKAAL 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,342,519
Number of Sequences: 1657284
Number of extensions: 9382435
Number of successful extensions: 23120
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 22420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23108
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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