Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g06
         (579 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071334-1|AAL48956.1|  436|Drosophila melanogaster RE35942p pro...    53   3e-07
AE014297-1533|AAF54824.2|  436|Drosophila melanogaster CG18549-P...    53   3e-07
X79802-1|CAA56197.1|  424|Drosophila melanogaster WM6 protein.         28   7.9  
L06018-1|AAB65835.1|  424|Drosophila melanogaster DECD family pu...    28   7.9  
AY118921-1|AAM50781.1|  424|Drosophila melanogaster LD23644p pro...    28   7.9  
AE014134-934|AAN10545.1|  424|Drosophila melanogaster CG7269-PC,...    28   7.9  
AE014134-933|AAN10544.1|  424|Drosophila melanogaster CG7269-PB,...    28   7.9  
AE014134-932|AAF52261.1|  424|Drosophila melanogaster CG7269-PA,...    28   7.9  

>AY071334-1|AAL48956.1|  436|Drosophila melanogaster RE35942p
           protein.
          Length = 436

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 27/59 (45%), Positives = 30/59 (50%)
 Frame = +2

Query: 2   LGGNYSDNSTSAFALFKFTQSLAAAACFFYXXXXXXXXXXXXXXXXXXXGTACFCRVEW 178
           LGG Y +N+  AFALFKFTQS+AAA  FFY                   GT  F  VEW
Sbjct: 364 LGGEYVNNAVGAFALFKFTQSVAAAISFFYSSHFGLYVQLGILVVMGTIGTIAFVFVEW 422


>AE014297-1533|AAF54824.2|  436|Drosophila melanogaster CG18549-PA
           protein.
          Length = 436

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 27/59 (45%), Positives = 30/59 (50%)
 Frame = +2

Query: 2   LGGNYSDNSTSAFALFKFTQSLAAAACFFYXXXXXXXXXXXXXXXXXXXGTACFCRVEW 178
           LGG Y +N+  AFALFKFTQS+AAA  FFY                   GT  F  VEW
Sbjct: 364 LGGEYVNNAVGAFALFKFTQSVAAAISFFYSSHFGLYVQLGILVVMGTIGTIAFVFVEW 422


>X79802-1|CAA56197.1|  424|Drosophila melanogaster WM6 protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 505 REHLLRTYFIRKIGTPGFEHRCIATHECTGRLIL 404
           R+ LL+   +R I   GFEH     HEC  + +L
Sbjct: 44  RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL 77


>L06018-1|AAB65835.1|  424|Drosophila melanogaster DECD family
           putative RNA helicase protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 505 REHLLRTYFIRKIGTPGFEHRCIATHECTGRLIL 404
           R+ LL+   +R I   GFEH     HEC  + +L
Sbjct: 44  RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL 77


>AY118921-1|AAM50781.1|  424|Drosophila melanogaster LD23644p
           protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 505 REHLLRTYFIRKIGTPGFEHRCIATHECTGRLIL 404
           R+ LL+   +R I   GFEH     HEC  + +L
Sbjct: 44  RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL 77


>AE014134-934|AAN10545.1|  424|Drosophila melanogaster CG7269-PC,
           isoform C protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 505 REHLLRTYFIRKIGTPGFEHRCIATHECTGRLIL 404
           R+ LL+   +R I   GFEH     HEC  + +L
Sbjct: 44  RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL 77


>AE014134-933|AAN10544.1|  424|Drosophila melanogaster CG7269-PB,
           isoform B protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 505 REHLLRTYFIRKIGTPGFEHRCIATHECTGRLIL 404
           R+ LL+   +R I   GFEH     HEC  + +L
Sbjct: 44  RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL 77


>AE014134-932|AAF52261.1|  424|Drosophila melanogaster CG7269-PA,
           isoform A protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 505 REHLLRTYFIRKIGTPGFEHRCIATHECTGRLIL 404
           R+ LL+   +R I   GFEH     HEC  + +L
Sbjct: 44  RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,645,269
Number of Sequences: 53049
Number of extensions: 308280
Number of successful extensions: 717
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)