Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g05
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    27   0.53 
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   2.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   2.8  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       24   2.8  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    24   2.8  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   5.0  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   8.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   8.7  

>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 26.6 bits (56), Expect = 0.53
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 211 FGPETAAGDGEPVDDPSPFPSRAQR 285
           FGP+T  G     DD  P PS  QR
Sbjct: 39  FGPQTRKGRRPVADDQQPGPSGLQR 63


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 55  SADSCARGSPVRTVDSSQDIEIPATAAHQDES 150
           S DS   G+P+  V  + D+ +P      DES
Sbjct: 127 SRDSATGGTPLAIVSPAGDVRVPEDDDAADES 158


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 120 NLDILARINCPDRRSSGTTVGAFSSQ 43
           N  I + + CP+   SGT +G  + Q
Sbjct: 15  NSTIRSEVTCPNHNISGTAIGTTNIQ 40


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/41 (24%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 334 KYDMVLMSFLLQIYYSFNPLTNTTNLFL-PIFIYSVTKIIW 453
           +YD  +M F ++++    P  +T+N  + PI + S+   ++
Sbjct: 125 RYDKKVMDFAVKLFQKAFPSDDTSNYIISPIMVQSLLSYLF 165


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 328 VHKYDMVLMSFLLQIYYSFNPLTNTTNLFLPIFIYSVTKII 450
           + + + +L+S  L    S+ PL N  NLF  ++++S+T+ I
Sbjct: 268 MQRTNYLLISIALIFGVSWLPL-NLFNLFADLYVHSITQDI 307


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 421 IFIYSVTKIIWFPPKD 468
           + +YS  K++W PP +
Sbjct: 142 VLVYSEGKVLWVPPTE 157


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 527 LSLLDITLFMNNIAFVVFELSLGGNHMIFVT 435
           +S+ D   F+N   F +F LSL  + +++ T
Sbjct: 277 MSMKDRNFFINITLFALFTLSLRYDRLLYRT 307


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 251  STGSPSPAAVSGPNIVKGSCEVWSETIESLMRTP 150
            +TG P   ++  P ++K   E  + T  S+ +TP
Sbjct: 1092 ATGLPFHYSLKTPTLMKFEFEASATTYPSIFKTP 1125


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.132    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,922
Number of Sequences: 2352
Number of extensions: 11887
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)