Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g03
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.79 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.7  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 490 IQSNSAVNIHKVFDQYLNFICLEDDLFI 573
           +QS   V +H V+  +L  IC  D  +I
Sbjct: 266 VQSEKIVWLHLVYISFLGIICAADVFYI 293


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 175 NQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGV 297
           N PLT NIA+ P     IY       + PL ++++L + G+
Sbjct: 335 NLPLTHNIAHNPYPSHSIYP---SSNLMPLNNIQNLSQSGI 372


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = -2

Query: 203 LAIFFVSG*FKLSICFKALSWRSLSVDISYFLHMNFV 93
           L +F ++  + L++C+    WR    D  +   ++F+
Sbjct: 102 LLLFVINVLYVLTLCYAVYYWRQQYEDFWHRYTLSFI 138


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -1

Query: 126 RHFLFFTYEFCFIN*YFFILDSENNQLFT*LKTYNYNQ 13
           +  LFF + FC I  + ++   + + L T    Y Y Q
Sbjct: 7   KRVLFF-FSFCCILFFIYLYWQQTSNLTTSKLLYTYRQ 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,444
Number of Sequences: 336
Number of extensions: 2938
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)