Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g03
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.0  
EF519477-2|ABP73564.1|  177|Anopheles gambiae CTL4 protein.            24   5.3  
EF519440-2|ABP73490.1|  165|Anopheles gambiae CTL4 protein.            23   7.0  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   7.0  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.0  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = +1

Query: 187 TKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPA 351
           ++ I    TW ++ + R   ++I+  V   D    G   HL  H  + S  + PA
Sbjct: 243 SREIVRPDTWSVIPFSRSDHELIAFEVKQPDENPAGAQQHLS-HRPQRSTRKNPA 296


>EF519477-2|ABP73564.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 426 IPFKLYITNHKTQT*RLSCISYPVKFCCQY 515
           +PF +YI          SC   P +F C+Y
Sbjct: 148 VPFCVYIQGSTMSWVATSCDDEPRQFICEY 177


>EF519440-2|ABP73490.1|  165|Anopheles gambiae CTL4 protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 429 PFKLYITNHKTQT*RLSCISYPVKFCCQY 515
           PF +YI          SC   P +F C+Y
Sbjct: 137 PFCVYIQGSTMSWVATSCXDEPRQFICEY 165


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 341 KYLLFISVLLLMKIWIAFAKISI 409
           KYLLF  +L+ + +W     +++
Sbjct: 310 KYLLFTMILVSLSVWTTVCVLNV 332


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = +1

Query: 217 KILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSPSDENLDRIC 396
           KI  YDR+ Q  I   +  ++  EL   L   L  D D      A+     + +++D   
Sbjct: 205 KIKPYDRIPQIFICATMWHENKEELMEFLKSILRLDEDQCARRMAMKHIQANKDDIDPDY 264

Query: 397 QDLDNGIY 420
            DL+  I+
Sbjct: 265 YDLETHIF 272


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,647
Number of Sequences: 2352
Number of extensions: 13113
Number of successful extensions: 53
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)