Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12g03
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical pr... 213 1e-55
Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical pr... 213 1e-55
U49829-10|AAA93389.2| 591|Caenorhabditis elegans Uncoordinated ... 52 3e-07
U49829-9|AAQ81273.1| 673|Caenorhabditis elegans Uncoordinated p... 52 3e-07
S66176-1|AAB28570.1| 591|Caenorhabditis elegans UNC-18 protein. 52 3e-07
S34207-1|AAB21818.1| 673|Caenorhabditis elegans unc-18 protein. 52 3e-07
AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical ... 44 1e-04
U49829-11|AAP40539.1| 93|Caenorhabditis elegans Uncoordinated ... 42 6e-04
AC024771-3|AAK70660.1| 148|Caenorhabditis elegans Hypothetical ... 29 3.2
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical ... 28 7.4
U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z35640-5|CAO82046.1| 689|Caenorhabditis elegans Hypothetical
protein F43D9.3b protein.
Length = 689
Score = 213 bits (520), Expect = 1e-55
Identities = 94/195 (48%), Positives = 140/195 (71%), Gaps = 1/195 (0%)
Frame = +1
Query: 118 EMSTLRERQLNALKQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGV 297
E+ ++R RQ+ AL+ M+NLN+P+ + EP WK+L+ DR GQDIISPL+ VK LRELGV
Sbjct: 32 ELESVRTRQIVALRTMINLNEPVVNSGVREPVWKVLVLDRTGQDIISPLLPVKQLRELGV 91
Query: 298 TLHLQLHSDRDSIPEVPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDL 477
TLHL + + R+ + +VPAVYF SP+DEN+D + +DL +YD ++ NFISP+ R +LE L
Sbjct: 92 TLHLLIGARREPLTDVPAVYFVSPNDENIDLMSEDLKKAMYDSFYCNFISPLARPRLESL 151
Query: 478 AASAIQSNSAVNIHKVFDQYLNFICLEDDLFIM-KHQQSDSLSYYAINKADTKDTEMEVI 654
A++A+ + + KV DQYLNFI LEDDLF++ ++ ++ + SY+A+N T D + +
Sbjct: 152 ASAAVHGGAVSQVQKVVDQYLNFISLEDDLFVLRRYSENSTFSYHAMNSPGTSDVAVNAM 211
Query: 655 MDNIVESLFSVFVTM 699
+D+I + LF+V TM
Sbjct: 212 LDSIADGLFAVCATM 226
>Z35640-4|CAA84704.1| 707|Caenorhabditis elegans Hypothetical
protein F43D9.3a protein.
Length = 707
Score = 213 bits (520), Expect = 1e-55
Identities = 94/195 (48%), Positives = 140/195 (71%), Gaps = 1/195 (0%)
Frame = +1
Query: 118 EMSTLRERQLNALKQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGV 297
E+ ++R RQ+ AL+ M+NLN+P+ + EP WK+L+ DR GQDIISPL+ VK LRELGV
Sbjct: 32 ELESVRTRQIVALRTMINLNEPVVNSGVREPVWKVLVLDRTGQDIISPLLPVKQLRELGV 91
Query: 298 TLHLQLHSDRDSIPEVPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDL 477
TLHL + + R+ + +VPAVYF SP+DEN+D + +DL +YD ++ NFISP+ R +LE L
Sbjct: 92 TLHLLIGARREPLTDVPAVYFVSPNDENIDLMSEDLKKAMYDSFYCNFISPLARPRLESL 151
Query: 478 AASAIQSNSAVNIHKVFDQYLNFICLEDDLFIM-KHQQSDSLSYYAINKADTKDTEMEVI 654
A++A+ + + KV DQYLNFI LEDDLF++ ++ ++ + SY+A+N T D + +
Sbjct: 152 ASAAVHGGAVSQVQKVVDQYLNFISLEDDLFVLRRYSENSTFSYHAMNSPGTSDVAVNAM 211
Query: 655 MDNIVESLFSVFVTM 699
+D+I + LF+V TM
Sbjct: 212 LDSIADGLFAVCATM 226
>U49829-10|AAA93389.2| 591|Caenorhabditis elegans Uncoordinated
protein 18, isoform a protein.
Length = 591
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 139 RQLNALKQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLH 318
+Q+ K + ++ +PL K W +LI D + ++S + ++ E G+T+ L+
Sbjct: 4 KQIVGHKLLNDVIRPLKKGDGRS-AWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLN 62
Query: 319 SDRDSIPEVPAVYFCSPSDENLDRICQD-LDNGIYDQYHLNFISPITRHKLEDLAASA 489
R+ +P + A+Y +P+ E++D++ QD +Y H+ F + L+ SA
Sbjct: 63 KRREPLPTLEAIYLIAPTAESIDKLIQDYCARNLYKCAHVFFTEACSDQLFSTLSKSA 120
>U49829-9|AAQ81273.1| 673|Caenorhabditis elegans Uncoordinated
protein 18, isoform c protein.
Length = 673
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +1
Query: 154 LKQMLN-LNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRD 330
++++LN + +PL K W +LI D + ++S + ++ E G+T+ L+ R+
Sbjct: 90 MRKLLNDVIRPLKKGDGRS-AWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLNKRRE 148
Query: 331 SIPEVPAVYFCSPSDENLDRICQD-LDNGIYDQYHLNFISPITRHKLEDLAASA 489
+P + A+Y +P+ E++D++ QD +Y H+ F + L+ SA
Sbjct: 149 PLPTLEAIYLIAPTAESIDKLIQDYCARNLYKCAHVFFTEACSDQLFSTLSKSA 202
>S66176-1|AAB28570.1| 591|Caenorhabditis elegans UNC-18 protein.
Length = 591
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 139 RQLNALKQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLH 318
+Q+ K + ++ +PL K W +LI D + ++S + ++ E G+T+ L+
Sbjct: 4 KQIVGHKLLNDVIRPLKKGDGRS-AWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLN 62
Query: 319 SDRDSIPEVPAVYFCSPSDENLDRICQD-LDNGIYDQYHLNFISPITRHKLEDLAASA 489
R+ +P + A+Y +P+ E++D++ QD +Y H+ F + L+ SA
Sbjct: 63 KRREPLPTLEAIYLIAPTAESIDKLIQDYCARNLYKCAHVFFTEACSDQLFSTLSKSA 120
>S34207-1|AAB21818.1| 673|Caenorhabditis elegans unc-18 protein.
Length = 673
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +1
Query: 154 LKQMLN-LNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRD 330
++++LN + +PL K W +LI D + ++S + ++ E G+T+ L+ R+
Sbjct: 90 MRKLLNDVIRPLKKGDGRS-AWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLNKRRE 148
Query: 331 SIPEVPAVYFCSPSDENLDRICQD-LDNGIYDQYHLNFISPITRHKLEDLAASA 489
+P + A+Y +P+ E++D++ QD +Y H+ F + L+ SA
Sbjct: 149 PLPTLEAIYLIAPTAESIDKLIQDYCARNLYKCAHVFFTEACSDQLFSTLSKSA 202
>AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical
protein T07A9.10 protein.
Length = 562
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +1
Query: 214 WKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSPSDENLDRI 393
+ +L+ D+ +++ +S+ ++ E GVTL L +R+ +P + A+Y SP E++D +
Sbjct: 29 FSVLVLDKSAMVVVNSCLSLNEVFEEGVTLVEDLTRNREPMPSMDAIYIISPVAESIDIL 88
Query: 394 CQDLD-------NGIYDQYHLNFISPITRHKLEDLAAS 486
D Y H+ F+ P E L+ S
Sbjct: 89 INDFSRKTKFNPGNSYRSAHIFFLDPCCDELFEKLSKS 126
>U49829-11|AAP40539.1| 93|Caenorhabditis elegans Uncoordinated
protein 18, isoform b protein.
Length = 93
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/82 (24%), Positives = 44/82 (53%)
Frame = +1
Query: 139 RQLNALKQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLH 318
+Q+ K + ++ +PL K W +LI D + ++S + ++ E G+T+ L+
Sbjct: 4 KQIVGHKLLNDVIRPLKKGDGRS-AWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLN 62
Query: 319 SDRDSIPEVPAVYFCSPSDENL 384
R+ +P + A+Y +P+ E++
Sbjct: 63 KRREPLPTLEAIYLIAPTAESV 84
>AC024771-3|AAK70660.1| 148|Caenorhabditis elegans Hypothetical
protein Y40B10A.5 protein.
Length = 148
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 302 FIYNYIQIEIRYQKYLLFISVLLLMKIWIAFA 397
F + Y+++ I Y L+F+ L+++ +WI A
Sbjct: 104 FPFRYLKLHIEYAYMLMFLPYLIVIPLWIPAA 135
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical protein
F53H10.2 protein.
Length = 900
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 136 ERQLNALKQMLNLNQPLT-KNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQ 312
+ QLN+L ++LN PLT + + T + L+ + Q++ P+ S ++ +
Sbjct: 836 QTQLNSLSNQMSLNSPLTPQQQLQQFTQQHLMARAMQQNLFQPVTSTPLVQPTHPLIQAG 895
Query: 313 LHS 321
LHS
Sbjct: 896 LHS 898
>AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical
protein T05E7.5 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = +1
Query: 481 ASAIQSNSAVNIHKVFDQYLNFICLEDDLFIMKHQQSDSLSYYAINKADTKDTEMEV 651
A ++ V +H++ ++ + +CL D+ +K + +D+ K TK + E+
Sbjct: 242 AQQLKQEKDVLVHEINEREVRILCLRSDILTLKSENNDTSKELDEMKNGTKALKHEL 298
>U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical
protein F45F2.10 protein.
Length = 980
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 235 RVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSPSDEN 381
R+GQDI+ LV V++ V Q+ +R E P V F P N
Sbjct: 664 RIGQDILDRLVVVQN--RTFVKKSFQMVIERSEFEEEPVVLFLIPCQYN 710
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,259,064
Number of Sequences: 27780
Number of extensions: 274128
Number of successful extensions: 702
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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