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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g03
         (699 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g17980.1 68415.m02090 sec1 family protein similar to SWISS-PR...   168   3e-42
At1g12360.1 68414.m01428 cytokinesis-related Sec1 protein (KEULE...    56   2e-08
At4g12120.1 68417.m01924 cytokinesis-related Sec1 protein, putat...    49   3e-06
At1g02010.1 68414.m00119 cytokinesis-related Sec1 protein, putat...    46   2e-05
At1g77140.1 68414.m08986 vacuolar protein sorting protein 45, pu...    42   4e-04
At3g27710.1 68416.m03460 zinc finger protein-related contains si...    35   0.060
At3g27720.1 68416.m03461 zinc finger protein-related contains Pf...    31   0.56 
At2g15900.1 68415.m01822 phox (PX) domain-containing protein wea...    30   1.7  
At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1...    30   1.7  
At1g25400.1 68414.m03153 expressed protein similar to unknown pr...    29   2.2  
At1g22040.1 68414.m02757 kelch repeat-containing F-box family pr...    29   3.0  
At5g47990.1 68418.m05929 cytochrome P450 family protein similar ...    28   6.8  
At2g39800.2 68415.m04887 delta 1-pyrroline-5-carboxylate synthet...    28   6.8  
At2g39800.1 68415.m04888 delta 1-pyrroline-5-carboxylate synthet...    28   6.8  
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha...    27   9.0  
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha...    27   9.0  

>At2g17980.1 68415.m02090 sec1 family protein similar to
           SWISS-PROT:P22213 SLY1 protein [Saccharomyces
           cerevisiae]; contains Pfam domain, PF00995: Sec1 family
          Length = 627

 Score =  168 bits (409), Expect = 3e-42
 Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 1/191 (0%)
 Frame = +1

Query: 130 LRERQLNALKQMLNLNQPLTKN-IANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLH 306
           LR++Q   + +MLNLNQPL  +  ANE  +KILIYDR  Q+I+SPL  VKDLR+ GVTL 
Sbjct: 5   LRQKQTECVIRMLNLNQPLNPSGTANEEVYKILIYDRFCQNILSPLTHVKDLRKHGVTLF 64

Query: 307 LQLHSDRDSIPEVPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAAS 486
             +  DR  + +VPAVYF  P++ NL RI  D    +YD +HLNF S I R  LE+LA+ 
Sbjct: 65  FLIDKDRQPVHDVPAVYFVQPTESNLQRIIADASRSLYDTFHLNFSSSIPRKFLEELASG 124

Query: 487 AIQSNSAVNIHKVFDQYLNFICLEDDLFIMKHQQSDSLSYYAINKADTKDTEMEVIMDNI 666
            ++S S   + KV DQYL F+ LED+LF +  Q     +Y  +N     + E+  I++ +
Sbjct: 125 TLKSGSVEKVSKVHDQYLEFVTLEDNLFSLAQQS----TYVQMNDPSAGEKEINEIIERV 180

Query: 667 VESLFSVFVTM 699
              LF V VT+
Sbjct: 181 ASGLFCVLVTL 191


>At1g12360.1 68414.m01428 cytokinesis-related Sec1 protein (KEULE)
           similar to cytokinesis-related Sec1 protein KEULE
           [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains
           Pfam domain, PF00995: Sec1 family
          Length = 666

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
 Frame = +1

Query: 190 KNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSP 369
           K  +++ TWK+LI D++   I+S    + D+ + GV+L   +   R  +P + A+YF  P
Sbjct: 35  KTGSSKSTWKVLIMDKLTVKIMSYACKMADITQEGVSLVEDIFRRRQPLPSMDAIYFIQP 94

Query: 370 SDENLDRICQDLD--NGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLN 543
           + EN+     D+   + +Y +  + F SP+++  +  +      S+    I  + +  L 
Sbjct: 95  TKENVIMFLSDMSGKSPLYKKAFVFFSSPVSKELVGHIKK---DSSVLPRIGALREMNLE 151

Query: 544 FICLEDDLFIMKHQQS 591
           F  ++   FI  H+++
Sbjct: 152 FFAIDSQGFITDHERA 167


>At4g12120.1 68417.m01924 cytokinesis-related Sec1 protein, putative
           similar to cytokinesis-related Sec1 protein KEULE
           [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains
           Pfam domain, PF00995: Sec1 family
          Length = 662

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 25/109 (22%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
 Frame = +1

Query: 139 RQLNALKQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLH 318
           RQ+   + +  + +P  +N +++ TWK+L+ D+    I+S    + ++ + G++L   + 
Sbjct: 19  RQITRERLLCEMLRP-ERNGSSKLTWKVLVMDKFTVKIMSSACKMSEITQEGISLVEVIT 77

Query: 319 SDRDSIPEVPAVYFCSPSDENLDRICQDL--DNGIYDQYHLNFISPITR 459
             R  +  +  +YF  P++EN+     D+   + +Y +  + F SP++R
Sbjct: 78  KHRQPMTAMEVIYFIQPTEENVTAFLSDMTGKSPLYKKAFVFFSSPVSR 126


>At1g02010.1 68414.m00119 cytokinesis-related Sec1 protein, putative
           similar to cytokinesis-related Sec1 protein KEULE
           [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains
           Pfam domain, PF00995: Sec1 family; non-consensus GC
           donor splice site at exon boundary 46833
          Length = 676

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = +1

Query: 214 WKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSPSDE 378
           WKILI DRV   ++S    + D+ + G++L  +L   R+ +P + A+YF  PS E
Sbjct: 45  WKILIMDRVTVKVMSQSCKMADITDQGISLVEELFKRREPMPGMDAIYFIQPSKE 99


>At1g77140.1 68414.m08986 vacuolar protein sorting protein 45,
           putative / VPS45p, putative identical to vacuolar
           protein sorting homolog VPS45p [Arabidopsis thaliana]
           gi|2921406|gb|AAC39472
          Length = 569

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
 Frame = +1

Query: 217 KILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHS---DRDSIPEVPAVYFCSPSDENLD 387
           K+LI D      +S + S  +L +  V L   + S    ++S+  + AVYF  P+ +N+ 
Sbjct: 22  KVLILDSETVSNVSIVYSQSELLQKEVFLVEMIDSISVSKESMSHLKAVYFIRPTSDNIQ 81

Query: 388 RICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFICLEDDL 567
           ++   L N  + +YHL F + +   ++  LA     S+    + +V + Y +F+   D  
Sbjct: 82  KLRYQLANPRFGEYHLFFSNLLKDTQIHILA----DSDEQEVVQQVQEYYADFVS-GDPY 136

Query: 568 FIMKHQQSDSLSYYAINKADTKDTEMEVIMDNIVESLFSVFVTM 699
               +  S+ L  Y I  A    + ++   D +V+ + +VF+ +
Sbjct: 137 HFTLNMASNHL--YMI-PAVVDPSGLQRFSDRVVDGIAAVFLAL 177


>At3g27710.1 68416.m03460 zinc finger protein-related contains
           similarity to zinc finger proteins and Pfam domain,
           PF01485: IBR domain
          Length = 537

 Score = 34.7 bits (76), Expect = 0.060
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
 Frame = +1

Query: 382 LDRICQDLDNGIYDQYHLNFISPITRHKLED-LAASAIQ---SNSAVNIHKVFDQYLNFI 549
           L+R  +DLD   Y  YH  + + I   KLED L  S ++   SNS     KVF +Y    
Sbjct: 338 LERAQRDLDR--YTHYHYRYKAHIDSLKLEDKLRKSILEKAVSNSETKDQKVFKEYSWVT 395

Query: 550 CLEDDLFIMKH--QQSDSLSYYAINKADTKDTEMEVIMDNIVESLF 681
              + LFI +    QS   ++Y   +   KD EM      I ++LF
Sbjct: 396 DAVNRLFISRRILSQSYPFAFYMFGEELFKD-EMSEKEREIKKNLF 440


>At3g27720.1 68416.m03461 zinc finger protein-related contains
           Pfam:PF01485 IBR domain
          Length = 493

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
 Frame = +1

Query: 382 LDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQS----NSAVNIHKVFDQYLNFI 549
           L+R  +DLD   Y  YH  + + I   KLED    +I      NS     KVF +Y   I
Sbjct: 298 LERAQRDLDR--YTHYHYRYKAHIDSLKLEDKLKKSILKKAVLNSETKDQKVFKEYSWII 355

Query: 550 CLEDDLFIMKHQQSDS--LSYYAINKADTKDTEMEVIMDNIVESLF 681
              + LF  +   S S    +Y   K   KD +M     NI ++LF
Sbjct: 356 DAVNRLFRSRRILSYSYPFVFYMFGKELFKD-DMSDEERNIKKNLF 400


>At2g15900.1 68415.m01822 phox (PX) domain-containing protein weak
           similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
           contains Pfam profiles PF00787: PX domain, PF02194: PXA
           domain
          Length = 1009

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +1

Query: 124 STLRERQLNAL-KQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVT 300
           +T R+ QL+ L K+ L++N P    I   P WK  I   V +  I+  +  K L +  V 
Sbjct: 68  ATPRQSQLSYLEKKQLSVNDPRLSGIPPPPRWKKKIDSPVVEAAINDFID-KILNDFVVN 126

Query: 301 LHLQLHSDRDSIPEV 345
           L   L +     PE+
Sbjct: 127 LWYSLITPDKEAPEL 141


>At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1)
           monovalent cation:proton antiporter family 2 (CPA2)
           member, PMID:11500563
          Length = 785

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 310 QLHSDRDSIPEVPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPIT-RHKLEDLAAS 486
           QLH   DS+  V A++F  P D     +C+ L N    Q HL  I  +    K E +   
Sbjct: 603 QLHGS-DSVQHVAALFFGGPDDREALSLCKWLTNN--SQIHLTVIQFVADDSKTEKIVGD 659

Query: 487 AI 492
           A+
Sbjct: 660 AV 661


>At1g25400.1 68414.m03153 expressed protein similar to unknown
           protein GI:6714347 from [Arabidopsis thaliana]
          Length = 288

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -2

Query: 692 TNTENRLSTMLSMITSISVSLVSALFIA*YDNESDCWCF 576
           T+   R+ T++  + +++VSL S   +  YD++SD W F
Sbjct: 59  TSLTTRIKTLVFRLRNVNVSLPSQTLLCNYDSDSD-WSF 96


>At1g22040.1 68414.m02757 kelch repeat-containing F-box family
           protein contains Pfam profiles PF01344: Kelch motif,
           PF00646: F-box domain
          Length = 475

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/88 (21%), Positives = 39/88 (44%)
 Frame = +1

Query: 370 SDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFI 549
           S EN +  C  L   + D+  +  ++ + R     +   + +  SAV+  +V+       
Sbjct: 32  SSENDEEECCRLIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELG 91

Query: 550 CLEDDLFIMKHQQSDSLSYYAINKADTK 633
             E+ L+++     D L +YA++   TK
Sbjct: 92  RTEEWLYVLTKGHEDKLLWYALDPVSTK 119


>At5g47990.1 68418.m05929 cytochrome P450 family protein similar to
           Cytochrome P450 93A3  (P450 CP5) (SP:O81973)  [Glycine
           max];
          Length = 511

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/82 (21%), Positives = 38/82 (46%)
 Frame = +1

Query: 436 NFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFICLEDDLFIMKHQQSDSLSYYAI 615
           +F+  +    L+ L  S   +   +N+   FD+ L  I +E +  + +H Q+  +    +
Sbjct: 227 HFLGAMFHKPLKKLGISLF-AKELMNVSNRFDELLEKILVEHEEKLQEHHQTSDMLDMLL 285

Query: 616 NKADTKDTEMEVIMDNIVESLF 681
                ++ E ++  D I +SLF
Sbjct: 286 EAYGDENAEYKITRDQI-KSLF 306


>At2g39800.2 68415.m04887 delta 1-pyrroline-5-carboxylate synthetase
           A / P5CS A (P5CS1) identical to SP:P54887:P5C1_ARATH
          Length = 614

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +1

Query: 343 VPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSN 501
           +P +     S EN+D++ + L  G          +PIT     D+A +A +S+
Sbjct: 151 IPVIITSGYSAENIDKVLRGLRVGTLFHQDARLWAPITDSNARDMAVAARESS 203


>At2g39800.1 68415.m04888 delta 1-pyrroline-5-carboxylate synthetase
           A / P5CS A (P5CS1) identical to SP:P54887:P5C1_ARATH
          Length = 717

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +1

Query: 343 VPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSN 501
           +P +     S EN+D++ + L  G          +PIT     D+A +A +S+
Sbjct: 254 IPVIITSGYSAENIDKVLRGLRVGTLFHQDARLWAPITDSNARDMAVAARESS 306


>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
           putative contains Pfam PF00400: WD domain, G-beta
           repeat; similar to Coatomer alpha subunit (Alpha-coat
           protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
           [Homo sapiens]
          Length = 1218

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 331 SIPEVPAVYFCSPSDENLDRICQDLDNGIYDQY 429
           S+ + P     SP+ EN   IC DLD G Y+ Y
Sbjct: 363 SLNQSPRTLSYSPT-ENAVLICSDLDGGSYELY 394


>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
           putative contains Pfam PF00400: WD domain, G-beta
           repeat; similar to Coatomer alpha subunit (Alpha-coat
           protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
           [Homo sapiens]
          Length = 1216

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 331 SIPEVPAVYFCSPSDENLDRICQDLDNGIYDQY 429
           S+ + P     SP+ EN   IC DLD G Y+ Y
Sbjct: 363 SLNQSPRTLSYSPT-ENAVLICSDLDGGSYELY 394


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,021,491
Number of Sequences: 28952
Number of extensions: 241253
Number of successful extensions: 615
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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