Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12g03
(699 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17980.1 68415.m02090 sec1 family protein similar to SWISS-PR... 168 3e-42
At1g12360.1 68414.m01428 cytokinesis-related Sec1 protein (KEULE... 56 2e-08
At4g12120.1 68417.m01924 cytokinesis-related Sec1 protein, putat... 49 3e-06
At1g02010.1 68414.m00119 cytokinesis-related Sec1 protein, putat... 46 2e-05
At1g77140.1 68414.m08986 vacuolar protein sorting protein 45, pu... 42 4e-04
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 35 0.060
At3g27720.1 68416.m03461 zinc finger protein-related contains Pf... 31 0.56
At2g15900.1 68415.m01822 phox (PX) domain-containing protein wea... 30 1.7
At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1... 30 1.7
At1g25400.1 68414.m03153 expressed protein similar to unknown pr... 29 2.2
At1g22040.1 68414.m02757 kelch repeat-containing F-box family pr... 29 3.0
At5g47990.1 68418.m05929 cytochrome P450 family protein similar ... 28 6.8
At2g39800.2 68415.m04887 delta 1-pyrroline-5-carboxylate synthet... 28 6.8
At2g39800.1 68415.m04888 delta 1-pyrroline-5-carboxylate synthet... 28 6.8
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 27 9.0
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 27 9.0
>At2g17980.1 68415.m02090 sec1 family protein similar to
SWISS-PROT:P22213 SLY1 protein [Saccharomyces
cerevisiae]; contains Pfam domain, PF00995: Sec1 family
Length = 627
Score = 168 bits (409), Expect = 3e-42
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 1/191 (0%)
Frame = +1
Query: 130 LRERQLNALKQMLNLNQPLTKN-IANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLH 306
LR++Q + +MLNLNQPL + ANE +KILIYDR Q+I+SPL VKDLR+ GVTL
Sbjct: 5 LRQKQTECVIRMLNLNQPLNPSGTANEEVYKILIYDRFCQNILSPLTHVKDLRKHGVTLF 64
Query: 307 LQLHSDRDSIPEVPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAAS 486
+ DR + +VPAVYF P++ NL RI D +YD +HLNF S I R LE+LA+
Sbjct: 65 FLIDKDRQPVHDVPAVYFVQPTESNLQRIIADASRSLYDTFHLNFSSSIPRKFLEELASG 124
Query: 487 AIQSNSAVNIHKVFDQYLNFICLEDDLFIMKHQQSDSLSYYAINKADTKDTEMEVIMDNI 666
++S S + KV DQYL F+ LED+LF + Q +Y +N + E+ I++ +
Sbjct: 125 TLKSGSVEKVSKVHDQYLEFVTLEDNLFSLAQQS----TYVQMNDPSAGEKEINEIIERV 180
Query: 667 VESLFSVFVTM 699
LF V VT+
Sbjct: 181 ASGLFCVLVTL 191
>At1g12360.1 68414.m01428 cytokinesis-related Sec1 protein (KEULE)
similar to cytokinesis-related Sec1 protein KEULE
[Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains
Pfam domain, PF00995: Sec1 family
Length = 666
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Frame = +1
Query: 190 KNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSP 369
K +++ TWK+LI D++ I+S + D+ + GV+L + R +P + A+YF P
Sbjct: 35 KTGSSKSTWKVLIMDKLTVKIMSYACKMADITQEGVSLVEDIFRRRQPLPSMDAIYFIQP 94
Query: 370 SDENLDRICQDLD--NGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLN 543
+ EN+ D+ + +Y + + F SP+++ + + S+ I + + L
Sbjct: 95 TKENVIMFLSDMSGKSPLYKKAFVFFSSPVSKELVGHIKK---DSSVLPRIGALREMNLE 151
Query: 544 FICLEDDLFIMKHQQS 591
F ++ FI H+++
Sbjct: 152 FFAIDSQGFITDHERA 167
>At4g12120.1 68417.m01924 cytokinesis-related Sec1 protein, putative
similar to cytokinesis-related Sec1 protein KEULE
[Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains
Pfam domain, PF00995: Sec1 family
Length = 662
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/109 (22%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +1
Query: 139 RQLNALKQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLH 318
RQ+ + + + +P +N +++ TWK+L+ D+ I+S + ++ + G++L +
Sbjct: 19 RQITRERLLCEMLRP-ERNGSSKLTWKVLVMDKFTVKIMSSACKMSEITQEGISLVEVIT 77
Query: 319 SDRDSIPEVPAVYFCSPSDENLDRICQDL--DNGIYDQYHLNFISPITR 459
R + + +YF P++EN+ D+ + +Y + + F SP++R
Sbjct: 78 KHRQPMTAMEVIYFIQPTEENVTAFLSDMTGKSPLYKKAFVFFSSPVSR 126
>At1g02010.1 68414.m00119 cytokinesis-related Sec1 protein, putative
similar to cytokinesis-related Sec1 protein KEULE
[Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains
Pfam domain, PF00995: Sec1 family; non-consensus GC
donor splice site at exon boundary 46833
Length = 676
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 214 WKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSPSDE 378
WKILI DRV ++S + D+ + G++L +L R+ +P + A+YF PS E
Sbjct: 45 WKILIMDRVTVKVMSQSCKMADITDQGISLVEELFKRREPMPGMDAIYFIQPSKE 99
>At1g77140.1 68414.m08986 vacuolar protein sorting protein 45,
putative / VPS45p, putative identical to vacuolar
protein sorting homolog VPS45p [Arabidopsis thaliana]
gi|2921406|gb|AAC39472
Length = 569
Score = 41.9 bits (94), Expect = 4e-04
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Frame = +1
Query: 217 KILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHS---DRDSIPEVPAVYFCSPSDENLD 387
K+LI D +S + S +L + V L + S ++S+ + AVYF P+ +N+
Sbjct: 22 KVLILDSETVSNVSIVYSQSELLQKEVFLVEMIDSISVSKESMSHLKAVYFIRPTSDNIQ 81
Query: 388 RICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFICLEDDL 567
++ L N + +YHL F + + ++ LA S+ + +V + Y +F+ D
Sbjct: 82 KLRYQLANPRFGEYHLFFSNLLKDTQIHILA----DSDEQEVVQQVQEYYADFVS-GDPY 136
Query: 568 FIMKHQQSDSLSYYAINKADTKDTEMEVIMDNIVESLFSVFVTM 699
+ S+ L Y I A + ++ D +V+ + +VF+ +
Sbjct: 137 HFTLNMASNHL--YMI-PAVVDPSGLQRFSDRVVDGIAAVFLAL 177
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 34.7 bits (76), Expect = 0.060
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Frame = +1
Query: 382 LDRICQDLDNGIYDQYHLNFISPITRHKLED-LAASAIQ---SNSAVNIHKVFDQYLNFI 549
L+R +DLD Y YH + + I KLED L S ++ SNS KVF +Y
Sbjct: 338 LERAQRDLDR--YTHYHYRYKAHIDSLKLEDKLRKSILEKAVSNSETKDQKVFKEYSWVT 395
Query: 550 CLEDDLFIMKH--QQSDSLSYYAINKADTKDTEMEVIMDNIVESLF 681
+ LFI + QS ++Y + KD EM I ++LF
Sbjct: 396 DAVNRLFISRRILSQSYPFAFYMFGEELFKD-EMSEKEREIKKNLF 440
>At3g27720.1 68416.m03461 zinc finger protein-related contains
Pfam:PF01485 IBR domain
Length = 493
Score = 31.5 bits (68), Expect = 0.56
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +1
Query: 382 LDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQS----NSAVNIHKVFDQYLNFI 549
L+R +DLD Y YH + + I KLED +I NS KVF +Y I
Sbjct: 298 LERAQRDLDR--YTHYHYRYKAHIDSLKLEDKLKKSILKKAVLNSETKDQKVFKEYSWII 355
Query: 550 CLEDDLFIMKHQQSDS--LSYYAINKADTKDTEMEVIMDNIVESLF 681
+ LF + S S +Y K KD +M NI ++LF
Sbjct: 356 DAVNRLFRSRRILSYSYPFVFYMFGKELFKD-DMSDEERNIKKNLF 400
>At2g15900.1 68415.m01822 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 1009
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 124 STLRERQLNAL-KQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVT 300
+T R+ QL+ L K+ L++N P I P WK I V + I+ + K L + V
Sbjct: 68 ATPRQSQLSYLEKKQLSVNDPRLSGIPPPPRWKKKIDSPVVEAAINDFID-KILNDFVVN 126
Query: 301 LHLQLHSDRDSIPEV 345
L L + PE+
Sbjct: 127 LWYSLITPDKEAPEL 141
>At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1)
monovalent cation:proton antiporter family 2 (CPA2)
member, PMID:11500563
Length = 785
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 310 QLHSDRDSIPEVPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPIT-RHKLEDLAAS 486
QLH DS+ V A++F P D +C+ L N Q HL I + K E +
Sbjct: 603 QLHGS-DSVQHVAALFFGGPDDREALSLCKWLTNN--SQIHLTVIQFVADDSKTEKIVGD 659
Query: 487 AI 492
A+
Sbjct: 660 AV 661
>At1g25400.1 68414.m03153 expressed protein similar to unknown
protein GI:6714347 from [Arabidopsis thaliana]
Length = 288
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -2
Query: 692 TNTENRLSTMLSMITSISVSLVSALFIA*YDNESDCWCF 576
T+ R+ T++ + +++VSL S + YD++SD W F
Sbjct: 59 TSLTTRIKTLVFRLRNVNVSLPSQTLLCNYDSDSD-WSF 96
>At1g22040.1 68414.m02757 kelch repeat-containing F-box family
protein contains Pfam profiles PF01344: Kelch motif,
PF00646: F-box domain
Length = 475
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = +1
Query: 370 SDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFI 549
S EN + C L + D+ + ++ + R + + + SAV+ +V+
Sbjct: 32 SSENDEEECCRLIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELG 91
Query: 550 CLEDDLFIMKHQQSDSLSYYAINKADTK 633
E+ L+++ D L +YA++ TK
Sbjct: 92 RTEEWLYVLTKGHEDKLLWYALDPVSTK 119
>At5g47990.1 68418.m05929 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max];
Length = 511
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/82 (21%), Positives = 38/82 (46%)
Frame = +1
Query: 436 NFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFICLEDDLFIMKHQQSDSLSYYAI 615
+F+ + L+ L S + +N+ FD+ L I +E + + +H Q+ + +
Sbjct: 227 HFLGAMFHKPLKKLGISLF-AKELMNVSNRFDELLEKILVEHEEKLQEHHQTSDMLDMLL 285
Query: 616 NKADTKDTEMEVIMDNIVESLF 681
++ E ++ D I +SLF
Sbjct: 286 EAYGDENAEYKITRDQI-KSLF 306
>At2g39800.2 68415.m04887 delta 1-pyrroline-5-carboxylate synthetase
A / P5CS A (P5CS1) identical to SP:P54887:P5C1_ARATH
Length = 614
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 343 VPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSN 501
+P + S EN+D++ + L G +PIT D+A +A +S+
Sbjct: 151 IPVIITSGYSAENIDKVLRGLRVGTLFHQDARLWAPITDSNARDMAVAARESS 203
>At2g39800.1 68415.m04888 delta 1-pyrroline-5-carboxylate synthetase
A / P5CS A (P5CS1) identical to SP:P54887:P5C1_ARATH
Length = 717
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 343 VPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSN 501
+P + S EN+D++ + L G +PIT D+A +A +S+
Sbjct: 254 IPVIITSGYSAENIDKVLRGLRVGTLFHQDARLWAPITDSNARDMAVAARESS 306
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 331 SIPEVPAVYFCSPSDENLDRICQDLDNGIYDQY 429
S+ + P SP+ EN IC DLD G Y+ Y
Sbjct: 363 SLNQSPRTLSYSPT-ENAVLICSDLDGGSYELY 394
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 331 SIPEVPAVYFCSPSDENLDRICQDLDNGIYDQY 429
S+ + P SP+ EN IC DLD G Y+ Y
Sbjct: 363 SLNQSPRTLSYSPT-ENAVLICSDLDGGSYELY 394
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,021,491
Number of Sequences: 28952
Number of extensions: 241253
Number of successful extensions: 615
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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