BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12g03 (699 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g17980.1 68415.m02090 sec1 family protein similar to SWISS-PR... 168 3e-42 At1g12360.1 68414.m01428 cytokinesis-related Sec1 protein (KEULE... 56 2e-08 At4g12120.1 68417.m01924 cytokinesis-related Sec1 protein, putat... 49 3e-06 At1g02010.1 68414.m00119 cytokinesis-related Sec1 protein, putat... 46 2e-05 At1g77140.1 68414.m08986 vacuolar protein sorting protein 45, pu... 42 4e-04 At3g27710.1 68416.m03460 zinc finger protein-related contains si... 35 0.060 At3g27720.1 68416.m03461 zinc finger protein-related contains Pf... 31 0.56 At2g15900.1 68415.m01822 phox (PX) domain-containing protein wea... 30 1.7 At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1... 30 1.7 At1g25400.1 68414.m03153 expressed protein similar to unknown pr... 29 2.2 At1g22040.1 68414.m02757 kelch repeat-containing F-box family pr... 29 3.0 At5g47990.1 68418.m05929 cytochrome P450 family protein similar ... 28 6.8 At2g39800.2 68415.m04887 delta 1-pyrroline-5-carboxylate synthet... 28 6.8 At2g39800.1 68415.m04888 delta 1-pyrroline-5-carboxylate synthet... 28 6.8 At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 27 9.0 At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 27 9.0 >At2g17980.1 68415.m02090 sec1 family protein similar to SWISS-PROT:P22213 SLY1 protein [Saccharomyces cerevisiae]; contains Pfam domain, PF00995: Sec1 family Length = 627 Score = 168 bits (409), Expect = 3e-42 Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 1/191 (0%) Frame = +1 Query: 130 LRERQLNALKQMLNLNQPLTKN-IANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLH 306 LR++Q + +MLNLNQPL + ANE +KILIYDR Q+I+SPL VKDLR+ GVTL Sbjct: 5 LRQKQTECVIRMLNLNQPLNPSGTANEEVYKILIYDRFCQNILSPLTHVKDLRKHGVTLF 64 Query: 307 LQLHSDRDSIPEVPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAAS 486 + DR + +VPAVYF P++ NL RI D +YD +HLNF S I R LE+LA+ Sbjct: 65 FLIDKDRQPVHDVPAVYFVQPTESNLQRIIADASRSLYDTFHLNFSSSIPRKFLEELASG 124 Query: 487 AIQSNSAVNIHKVFDQYLNFICLEDDLFIMKHQQSDSLSYYAINKADTKDTEMEVIMDNI 666 ++S S + KV DQYL F+ LED+LF + Q +Y +N + E+ I++ + Sbjct: 125 TLKSGSVEKVSKVHDQYLEFVTLEDNLFSLAQQS----TYVQMNDPSAGEKEINEIIERV 180 Query: 667 VESLFSVFVTM 699 LF V VT+ Sbjct: 181 ASGLFCVLVTL 191 >At1g12360.1 68414.m01428 cytokinesis-related Sec1 protein (KEULE) similar to cytokinesis-related Sec1 protein KEULE [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains Pfam domain, PF00995: Sec1 family Length = 666 Score = 56.4 bits (130), Expect = 2e-08 Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 2/136 (1%) Frame = +1 Query: 190 KNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSP 369 K +++ TWK+LI D++ I+S + D+ + GV+L + R +P + A+YF P Sbjct: 35 KTGSSKSTWKVLIMDKLTVKIMSYACKMADITQEGVSLVEDIFRRRQPLPSMDAIYFIQP 94 Query: 370 SDENLDRICQDLD--NGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLN 543 + EN+ D+ + +Y + + F SP+++ + + S+ I + + L Sbjct: 95 TKENVIMFLSDMSGKSPLYKKAFVFFSSPVSKELVGHIKK---DSSVLPRIGALREMNLE 151 Query: 544 FICLEDDLFIMKHQQS 591 F ++ FI H+++ Sbjct: 152 FFAIDSQGFITDHERA 167 >At4g12120.1 68417.m01924 cytokinesis-related Sec1 protein, putative similar to cytokinesis-related Sec1 protein KEULE [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains Pfam domain, PF00995: Sec1 family Length = 662 Score = 49.2 bits (112), Expect = 3e-06 Identities = 25/109 (22%), Positives = 58/109 (53%), Gaps = 2/109 (1%) Frame = +1 Query: 139 RQLNALKQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLH 318 RQ+ + + + +P +N +++ TWK+L+ D+ I+S + ++ + G++L + Sbjct: 19 RQITRERLLCEMLRP-ERNGSSKLTWKVLVMDKFTVKIMSSACKMSEITQEGISLVEVIT 77 Query: 319 SDRDSIPEVPAVYFCSPSDENLDRICQDL--DNGIYDQYHLNFISPITR 459 R + + +YF P++EN+ D+ + +Y + + F SP++R Sbjct: 78 KHRQPMTAMEVIYFIQPTEENVTAFLSDMTGKSPLYKKAFVFFSSPVSR 126 >At1g02010.1 68414.m00119 cytokinesis-related Sec1 protein, putative similar to cytokinesis-related Sec1 protein KEULE [Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains Pfam domain, PF00995: Sec1 family; non-consensus GC donor splice site at exon boundary 46833 Length = 676 Score = 46.4 bits (105), Expect = 2e-05 Identities = 21/55 (38%), Positives = 33/55 (60%) Frame = +1 Query: 214 WKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSPSDE 378 WKILI DRV ++S + D+ + G++L +L R+ +P + A+YF PS E Sbjct: 45 WKILIMDRVTVKVMSQSCKMADITDQGISLVEELFKRREPMPGMDAIYFIQPSKE 99 >At1g77140.1 68414.m08986 vacuolar protein sorting protein 45, putative / VPS45p, putative identical to vacuolar protein sorting homolog VPS45p [Arabidopsis thaliana] gi|2921406|gb|AAC39472 Length = 569 Score = 41.9 bits (94), Expect = 4e-04 Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 3/164 (1%) Frame = +1 Query: 217 KILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHS---DRDSIPEVPAVYFCSPSDENLD 387 K+LI D +S + S +L + V L + S ++S+ + AVYF P+ +N+ Sbjct: 22 KVLILDSETVSNVSIVYSQSELLQKEVFLVEMIDSISVSKESMSHLKAVYFIRPTSDNIQ 81 Query: 388 RICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFICLEDDL 567 ++ L N + +YHL F + + ++ LA S+ + +V + Y +F+ D Sbjct: 82 KLRYQLANPRFGEYHLFFSNLLKDTQIHILA----DSDEQEVVQQVQEYYADFVS-GDPY 136 Query: 568 FIMKHQQSDSLSYYAINKADTKDTEMEVIMDNIVESLFSVFVTM 699 + S+ L Y I A + ++ D +V+ + +VF+ + Sbjct: 137 HFTLNMASNHL--YMI-PAVVDPSGLQRFSDRVVDGIAAVFLAL 177 >At3g27710.1 68416.m03460 zinc finger protein-related contains similarity to zinc finger proteins and Pfam domain, PF01485: IBR domain Length = 537 Score = 34.7 bits (76), Expect = 0.060 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Frame = +1 Query: 382 LDRICQDLDNGIYDQYHLNFISPITRHKLED-LAASAIQ---SNSAVNIHKVFDQYLNFI 549 L+R +DLD Y YH + + I KLED L S ++ SNS KVF +Y Sbjct: 338 LERAQRDLDR--YTHYHYRYKAHIDSLKLEDKLRKSILEKAVSNSETKDQKVFKEYSWVT 395 Query: 550 CLEDDLFIMKH--QQSDSLSYYAINKADTKDTEMEVIMDNIVESLF 681 + LFI + QS ++Y + KD EM I ++LF Sbjct: 396 DAVNRLFISRRILSQSYPFAFYMFGEELFKD-EMSEKEREIKKNLF 440 >At3g27720.1 68416.m03461 zinc finger protein-related contains Pfam:PF01485 IBR domain Length = 493 Score = 31.5 bits (68), Expect = 0.56 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 6/106 (5%) Frame = +1 Query: 382 LDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQS----NSAVNIHKVFDQYLNFI 549 L+R +DLD Y YH + + I KLED +I NS KVF +Y I Sbjct: 298 LERAQRDLDR--YTHYHYRYKAHIDSLKLEDKLKKSILKKAVLNSETKDQKVFKEYSWII 355 Query: 550 CLEDDLFIMKHQQSDS--LSYYAINKADTKDTEMEVIMDNIVESLF 681 + LF + S S +Y K KD +M NI ++LF Sbjct: 356 DAVNRLFRSRRILSYSYPFVFYMFGKELFKD-DMSDEERNIKKNLF 400 >At2g15900.1 68415.m01822 phox (PX) domain-containing protein weak similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens}; contains Pfam profiles PF00787: PX domain, PF02194: PXA domain Length = 1009 Score = 29.9 bits (64), Expect = 1.7 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 124 STLRERQLNAL-KQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVT 300 +T R+ QL+ L K+ L++N P I P WK I V + I+ + K L + V Sbjct: 68 ATPRQSQLSYLEKKQLSVNDPRLSGIPPPPRWKKKIDSPVVEAAINDFID-KILNDFVVN 126 Query: 301 LHLQLHSDRDSIPEV 345 L L + PE+ Sbjct: 127 LWYSLITPDKEAPEL 141 >At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1) monovalent cation:proton antiporter family 2 (CPA2) member, PMID:11500563 Length = 785 Score = 29.9 bits (64), Expect = 1.7 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +1 Query: 310 QLHSDRDSIPEVPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPIT-RHKLEDLAAS 486 QLH DS+ V A++F P D +C+ L N Q HL I + K E + Sbjct: 603 QLHGS-DSVQHVAALFFGGPDDREALSLCKWLTNN--SQIHLTVIQFVADDSKTEKIVGD 659 Query: 487 AI 492 A+ Sbjct: 660 AV 661 >At1g25400.1 68414.m03153 expressed protein similar to unknown protein GI:6714347 from [Arabidopsis thaliana] Length = 288 Score = 29.5 bits (63), Expect = 2.2 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = -2 Query: 692 TNTENRLSTMLSMITSISVSLVSALFIA*YDNESDCWCF 576 T+ R+ T++ + +++VSL S + YD++SD W F Sbjct: 59 TSLTTRIKTLVFRLRNVNVSLPSQTLLCNYDSDSD-WSF 96 >At1g22040.1 68414.m02757 kelch repeat-containing F-box family protein contains Pfam profiles PF01344: Kelch motif, PF00646: F-box domain Length = 475 Score = 29.1 bits (62), Expect = 3.0 Identities = 19/88 (21%), Positives = 39/88 (44%) Frame = +1 Query: 370 SDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFI 549 S EN + C L + D+ + ++ + R + + + SAV+ +V+ Sbjct: 32 SSENDEEECCRLIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELG 91 Query: 550 CLEDDLFIMKHQQSDSLSYYAINKADTK 633 E+ L+++ D L +YA++ TK Sbjct: 92 RTEEWLYVLTKGHEDKLLWYALDPVSTK 119 >At5g47990.1 68418.m05929 cytochrome P450 family protein similar to Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine max]; Length = 511 Score = 27.9 bits (59), Expect = 6.8 Identities = 18/82 (21%), Positives = 38/82 (46%) Frame = +1 Query: 436 NFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFICLEDDLFIMKHQQSDSLSYYAI 615 +F+ + L+ L S + +N+ FD+ L I +E + + +H Q+ + + Sbjct: 227 HFLGAMFHKPLKKLGISLF-AKELMNVSNRFDELLEKILVEHEEKLQEHHQTSDMLDMLL 285 Query: 616 NKADTKDTEMEVIMDNIVESLF 681 ++ E ++ D I +SLF Sbjct: 286 EAYGDENAEYKITRDQI-KSLF 306 >At2g39800.2 68415.m04887 delta 1-pyrroline-5-carboxylate synthetase A / P5CS A (P5CS1) identical to SP:P54887:P5C1_ARATH Length = 614 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = +1 Query: 343 VPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSN 501 +P + S EN+D++ + L G +PIT D+A +A +S+ Sbjct: 151 IPVIITSGYSAENIDKVLRGLRVGTLFHQDARLWAPITDSNARDMAVAARESS 203 >At2g39800.1 68415.m04888 delta 1-pyrroline-5-carboxylate synthetase A / P5CS A (P5CS1) identical to SP:P54887:P5C1_ARATH Length = 717 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = +1 Query: 343 VPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSN 501 +P + S EN+D++ + L G +PIT D+A +A +S+ Sbjct: 254 IPVIITSGYSAENIDKVLRGLRVGTLFHQDARLWAPITDSNARDMAVAARESS 306 >At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha, putative contains Pfam PF00400: WD domain, G-beta repeat; similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens] Length = 1218 Score = 27.5 bits (58), Expect = 9.0 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 331 SIPEVPAVYFCSPSDENLDRICQDLDNGIYDQY 429 S+ + P SP+ EN IC DLD G Y+ Y Sbjct: 363 SLNQSPRTLSYSPT-ENAVLICSDLDGGSYELY 394 >At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha, putative contains Pfam PF00400: WD domain, G-beta repeat; similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens] Length = 1216 Score = 27.5 bits (58), Expect = 9.0 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 331 SIPEVPAVYFCSPSDENLDRICQDLDNGIYDQY 429 S+ + P SP+ EN IC DLD G Y+ Y Sbjct: 363 SLNQSPRTLSYSPT-ENAVLICSDLDGGSYELY 394 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,021,491 Number of Sequences: 28952 Number of extensions: 241253 Number of successful extensions: 615 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 595 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 613 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1496852856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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