Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12g01
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       26   0.25 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 251 CKYYVAPETASCGHSLCHLCWKKRRTCPICATLLE 355
           C +    +     HS  H+   KR TCP C  + E
Sbjct: 207 CDFVAITKLEQWNHSKVHIREDKRLTCPKCPFITE 241


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 389 TLTEHVQNLGNAFEKLFKTKL 451
           TL EH+++L   FEKL + ++
Sbjct: 467 TLNEHLEHLRQVFEKLKQARM 487


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 249 AVSTMLHLKQLLVGIHYVIYVG 314
           A S +L +  LL+G    IYVG
Sbjct: 68  ATSILLKVSSLLIGFCASIYVG 89


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 531 LASHSLTLSIGSFI 490
           L S S+ LS+GSFI
Sbjct: 37  LTSFSVVLSLGSFI 50


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -1

Query: 603 LTILTVSCDDCPEFKAEFVNWF*ELASHSLTLS 505
           ++++ V+CD C     + ++W  +L    +T S
Sbjct: 291 VSLVMVTCDACTIASKQTISWCYKLQEQFVTNS 323


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 105 VIIRCDQPVRDFD 143
           ++I CDQ +R+FD
Sbjct: 212 LLILCDQILREFD 224


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -1

Query: 603 LTILTVSCDDCPEFKAEFVNWF*ELASHSLTLS 505
           ++++ V+CD C     + ++W  +L    +T S
Sbjct: 291 VSLVMVTCDACTIASKQTISWCYKLQEQFVTNS 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,139
Number of Sequences: 336
Number of extensions: 3397
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)