BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12f24 (541 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 24 0.98 AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 5.2 X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 6.9 AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 9.2 >AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein protein. Length = 1156 Score = 23.8 bits (49), Expect = 0.98 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +3 Query: 342 RCPAGDPGQSERSVLGSVPDTLAP 413 RCP+G+ SER+ L TL+P Sbjct: 97 RCPSGESMLSERAALLRGVPTLSP 120 >AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 protein protein. Length = 301 Score = 21.4 bits (43), Expect = 5.2 Identities = 11/40 (27%), Positives = 18/40 (45%) Frame = -1 Query: 415 PGASVSGTDPSTERSDCPGSPAGHRAPSPGDETCSTVSKL 296 PG + G + S G PAG++ + T T ++L Sbjct: 42 PGLGLHGLPVDSLHSSMAGYPAGNQRKQRRERTTFTRAQL 81 >X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. Length = 524 Score = 21.0 bits (42), Expect = 6.9 Identities = 9/29 (31%), Positives = 14/29 (48%) Frame = +3 Query: 90 IQQRIEMSDIRIGNLEVEARRGDAGSQGC 176 +QQ I + +G + E+R D GC Sbjct: 380 LQQLIRERQLAVGGSQEESRVLDLSKPGC 408 >AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 protein protein. Length = 371 Score = 20.6 bits (41), Expect = 9.2 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = -3 Query: 293 NRSSLVTTPS 264 N SSL+TTPS Sbjct: 260 NTSSLITTPS 269 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 128,766 Number of Sequences: 336 Number of extensions: 2869 Number of successful extensions: 4 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 13201902 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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