Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f24
(541 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 140 9e-34
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 62 3e-10
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 55 4e-08
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_18890| Best HMM Match : OCIA (HMM E-Value=6.3) 29 1.8
SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 2.4
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 29 3.2
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 3.2
SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08) 28 4.2
SB_12715| Best HMM Match : Adeno_E1A (HMM E-Value=1.3) 28 4.2
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 28 5.6
SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38) 28 5.6
SB_41989| Best HMM Match : RVT_1 (HMM E-Value=1.2e-33) 28 5.6
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 28 5.6
SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 27 7.4
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_58282| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_34495| Best HMM Match : Ets (HMM E-Value=0) 27 9.8
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 27 9.8
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 183 bits (445), Expect = 1e-46
Identities = 85/148 (57%), Positives = 106/148 (71%)
Frame = +1
Query: 85 VEFNNELKCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 264
V+ NN L+ P+LGLGTWKSKPG+V AVK AI GYRHIDCAY Y NEKEVG+A+ ++
Sbjct: 4 VKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALR-ELL 62
Query: 265 EGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 444
VV R+DLFITSKLWNT H P VR ++L +L + YLDLYLIHWP ++++ FP
Sbjct: 63 GSVVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFP 122
Query: 445 TDQSGKIQFSDVDYVDTWKAMEPLVKEG 528
D+ G + ++ D DTWKAME LV EG
Sbjct: 123 KDEQGNVLYAYHDPCDTWKAMEKLVDEG 150
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 140 bits (338), Expect = 9e-34
Identities = 69/133 (51%), Positives = 89/133 (66%)
Frame = +1
Query: 130 TWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKL 309
TW+S EV AV+ AI++GYRHIDCA +YGNE E+GEA++ + EG V RE+LF+TSKL
Sbjct: 59 TWQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKL 118
Query: 310 WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYV 489
W H PD V A Q TL NL + YLDLYLIH P A+K+ L + G I ++
Sbjct: 119 WCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQ 178
Query: 490 DTWKAMEPLVKEG 528
+TW+AME LV +G
Sbjct: 179 NTWQAMEGLVAKG 191
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1
Query: 124 LGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 288
L TW S G+V AV+ A ++GYR IDCA ++GNE GEA++ + +G V RE+
Sbjct: 4 LCTWHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE 55
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 62.1 bits (144), Expect = 3e-10
Identities = 39/106 (36%), Positives = 58/106 (54%)
Frame = +1
Query: 94 NNELKCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 273
N+ K P+LGLG QAV A++ GYR ID A Y NE+ VGEA+
Sbjct: 71 NDGRKIPLLGLGAHDIHS---KQAVLWALESGYRLIDTASRYHNEQSVGEAVRCSN---- 123
Query: 274 VTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWP 411
+ R ++++ +K++ T H A ++L L + Y+DLYLIH+P
Sbjct: 124 IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFP 169
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 175 AIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQ 354
A+ GYR +D A +Y NEKEVG A+ K G + RED+++T+KL + +
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVR---KSG-LKREDIYVTTKLKPSEEGHSNALKYAK 108
Query: 355 ETLDNLNVQYLDLYLIHWPQ 414
E++ L++ Y+DL+LIH P+
Sbjct: 109 ESIKKLDIGYVDLFLIHTPR 128
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 54.8 bits (126), Expect = 4e-08
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = +1
Query: 106 KCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 285
K P GLG + QAV A++ GYR ID A Y NEK VGEA ++E V R
Sbjct: 8 KIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEA----LRESAVPRS 63
Query: 286 DLFITSKLWNTFHRPDLVRGALQETLDNL 372
++++ +K+++T H + A +L L
Sbjct: 64 EVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 54.8 bits (126), Expect = 4e-08
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Frame = +1
Query: 112 PILGLGTWKSKPGEVT-QAVKDAIDIGYRHIDCAYVYG-NEKEVGEAITSKIKEGVVTRE 285
P++G GT + GE T VK A++ GYR ID A Y +E +V +AI + + R+
Sbjct: 338 PVMGFGT--ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVAKAIA----DSGIPRK 391
Query: 286 DLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 465
D+FI +KL + + +++ +L L+ Y+DL+LIH K T G+
Sbjct: 392 DIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH----SKTCDDFLLTCAEGEP 447
Query: 466 QFSDVDYVDTWKAMEPLVKEG 528
+ + + ++WKAME L ++G
Sbjct: 448 RGT---WKESWKAMEELHRQG 465
>SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 31.9 bits (69), Expect = 0.34
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +1
Query: 154 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 333
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 260 VPEKITNIIRKSYEEMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 319
Query: 334 LVRGALQETLDNL--NVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 465
R +Q TL ++ + DL L+ Q ++ + D S K+
Sbjct: 320 QKRNGIQWTLWKQLDDLDFADLALLFHTQQQMQEKTNIVADNSAKL 365
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 30.7 bits (66), Expect = 0.80
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -1
Query: 439 RESRLPCRPGASVSGTD--PSTERSDCPGSPAGHRAPSPGDETCSTVS 302
R+ P R G+ T+ PS RSD S G S GDE ST+S
Sbjct: 151 RKHSTPARTGSQRESTERVPSVSRSDTSSSLTGSSPASLGDELESTLS 198
>SB_18890| Best HMM Match : OCIA (HMM E-Value=6.3)
Length = 310
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +1
Query: 97 NELKCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEG-V 273
N + L LG + G + AV+ ++ G+ G+ KE + + + +
Sbjct: 61 NPISVTTLQLGLERLDMGLMNMAVRSLLEAGF---------GSRKEKAQVEETTTDQACI 111
Query: 274 VTREDLFITSK-LWNTFHRPDLVRGALQETLDNLNVQY 384
++ ED+F+ + + FHR +V+ + T D +++QY
Sbjct: 112 ISAEDMFLPRQSISQRFHRLYVVKKLPEGTTDGVSIQY 149
>SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 761
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 136 KSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 264
KS P G + V A + YRH +Y++G++ EV T +K
Sbjct: 6 KSHPIGTIAVGVAIAAAVYYRHSIKSYIFGDDNEVSALATCVVK 49
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -1
Query: 406 SVSGTDPSTERSDCPGSPAGHRAPSP 329
S S T PS RSD P +P G AP P
Sbjct: 594 SSSHTAPSRGRSDSPPTPEGRGAPPP 619
>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 416 PTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRG 529
P+R + SR T + +S SRT TP SR+S RG
Sbjct: 178 PSRTSTPRSRLTPRSRSRSRTITPSTPSTTSSRASSRG 215
>SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 639
Score = 28.7 bits (61), Expect = 3.2
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 262 KEGVVTREDLFITSK-LWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSL 438
K+ V +DLF+ L N RPDL + E V DL+L+ PQA + S
Sbjct: 35 KKTQVDSKDLFLLQMPLANESWRPDLSKIKFPEIPKKTPVDAKDLFLLRMPQA---NESW 91
Query: 439 FPTDQSGKIQFSDVD 483
P D S KI+F+ V+
Sbjct: 92 MP-DLS-KIKFAQVE 104
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 127 GTWKSKPGEVTQAVKDAIDIGYRHIDCA 210
G+W + P +VT ++ +D+G RH+ CA
Sbjct: 209 GSWCASPSDVTPFLQ--VDLGTRHVICA 234
>SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 178 IDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLW----NTFHRPDLVRG 345
I++ Y+H +C+ + + S +++G + LF+ + W T +P ++
Sbjct: 104 IELFYQHFECSVILDGHLSEWFPVNSGVRQGCIISPLLFLLAIDWIMRNTTADKPRGIQW 163
Query: 346 ALQETLDNLNVQY 384
L L++L+ Y
Sbjct: 164 TLTSQLEDLDFAY 176
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 454 IGRSGRESRLPCRPGASVSGTDPSTERSDCPGSPAGHRAPS--PGDETCSTVS 302
+G S + + G SVSG P+++ PG P+ PS P E S+ +
Sbjct: 1330 LGFSASGNSWSTQDGMSVSGLTPNSQPWAAPGGPSSSSTPSSDPSAEAASSTA 1382
>SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 28.3 bits (60), Expect = 4.2
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 154 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 333
V++ + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 726 VSEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 785
Query: 334 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 465
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 786 QKRNGIQWTLWKQLDDLDFAD-DLALLSHTQQQMQEKTNIVADNSARL 832
>SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08)
Length = 421
Score = 28.3 bits (60), Expect = 4.2
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 154 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 333
V++ + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 82 VSEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 141
Query: 334 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 465
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 142 QKRNGIQWTLWKQLDDLDFAD-DLALLSHTQQQMQEKTNIVADNSARL 188
>SB_12715| Best HMM Match : Adeno_E1A (HMM E-Value=1.3)
Length = 909
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 167 TACVTSPGFDFQVPNPNIGHFNSLLNSTKG 78
T+C+T FD ++ HF+ +NSTKG
Sbjct: 396 TSCITGNSFDSLDSLDSVTHFSIEVNSTKG 425
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 27.9 bits (59), Expect = 5.6
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 352 QETLDNLNVQYLDLYLIHW 408
+++L+ L + +DLYL+HW
Sbjct: 49 EKSLERLGIDRIDLYLLHW 67
>SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38)
Length = 492
Score = 27.9 bits (59), Expect = 5.6
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +1
Query: 154 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 333
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 154 VPEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 213
Query: 334 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 465
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 214 QKRNGIQWTLWKQLDDLDFAN-DLALLSHTQQQMQEKTNIVADNSARL 260
>SB_41989| Best HMM Match : RVT_1 (HMM E-Value=1.2e-33)
Length = 585
Score = 27.9 bits (59), Expect = 5.6
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +1
Query: 154 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 333
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 222 VPEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 281
Query: 334 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 465
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 282 QKRNGIQWTLWKQLDDLDFAN-DLALLSHTQQQMQEKTNIVADNSARL 328
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 383 TWICT*YTGPRPTRKTALSSRP 448
T C YTGP+PT T SRP
Sbjct: 2219 TPFCRPYTGPKPTGPTPTPSRP 2240
>SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06)
Length = 623
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 367 NLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVK 522
NL + +L LI + KE + +G++ D WKAMEP V+
Sbjct: 376 NLPLDHLQQKLIQETEKLKEIAPHLTQEAAGQVPVVAGRPKDVWKAMEPEVR 427
>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 322 HRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 465
HR + T ++L++Q LYL HW KE L+ T + KI
Sbjct: 27 HRLSIKNKVATNTANSLSIQE-QLYLDHWKNNRKEKKPLYYTMLASKI 73
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1
Query: 442 GRESRLPCRPGASVSGTDPSTERSDCPGSPAGHRAPSPGDETC 314
G + PC PG + +T SDC AG PG + C
Sbjct: 3132 GSGDKNPCSPG-HYGDRELATSPSDCKKCSAGDFNDQPGGKAC 3173
>SB_58282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 451 GRSGRESRLPCRPGASVSGTDPSTERSDCPGSPAGHRA 338
G+ GRES P GA + T +T+ CP +P HR+
Sbjct: 244 GKQGRESLSPLGRGAVDTITGQATDSLFCPRAPE-HRS 280
>SB_34495| Best HMM Match : Ets (HMM E-Value=0)
Length = 476
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 393 VPDTLAPGLQGRRLSLPDRPIR*N 464
VPDTL P + GRR P +P + N
Sbjct: 208 VPDTLPPKVPGRRRRGPKKPAKYN 231
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 27.1 bits (57), Expect = 9.8
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 262 KEGVVTREDLFITSK-LWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSL 438
K+ V +DLF+ L N RPD + E V DL+L+ PQA + S
Sbjct: 2047 KKTQVDSKDLFLLQMPLANESWRPDFSKIKFPEIPKKTPVDAKDLFLLRMPQA---NESW 2103
Query: 439 FPTDQSGKIQFSDVD 483
P D S KI+F+ V+
Sbjct: 2104 MP-DLS-KIKFAQVE 2116
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,420,075
Number of Sequences: 59808
Number of extensions: 386831
Number of successful extensions: 1300
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1227799733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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