Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f23
(513 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g07671.1 68415.m00894 H+-transporting two-sector ATPase, C su... 44 8e-05
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 28 4.2
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 28 4.2
At1g17960.1 68414.m02222 threonyl-tRNA synthetase, putative / th... 28 4.2
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 27 5.6
At1g68110.1 68414.m07780 epsin N-terminal homology (ENTH) domain... 27 5.6
At5g11040.1 68418.m01290 expressed protein weak similarity to hy... 27 7.4
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 7.4
At3g52110.1 68416.m05719 expressed protein 27 7.4
At3g48380.2 68416.m05281 expressed protein 27 7.4
At3g48380.1 68416.m05280 expressed protein 27 7.4
At5g35210.2 68418.m04175 peptidase M50 family protein / sterol-r... 27 9.8
At5g35210.1 68418.m04174 peptidase M50 family protein / sterol-r... 27 9.8
At5g21120.1 68418.m02518 ethylene-insensitive3-like2 (EIL2) iden... 27 9.8
At5g20220.1 68418.m02407 zinc knuckle (CCHC-type) family protein... 27 9.8
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 27 9.8
At3g61290.1 68416.m06859 hypothetical protein 27 9.8
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 27 9.8
>At2g07671.1 68415.m00894 H+-transporting two-sector ATPase, C
subunit family protein similar to ATPase subunit 9
[Arabidopsis thaliana] GI:15215920; contains Pfam
profile PF00137: ATP synthase subunit C
Length = 85
Score = 43.6 bits (98), Expect = 8e-05
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +1
Query: 322 FGSLIIGYARNPSLKQQLFSYAILGFALSE 411
F SLI ARNPSL +Q F YAILGFAL+E
Sbjct: 39 FSSLIHSVARNPSLAKQSFGYAILGFALTE 68
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 56 LIKTKCCLPPD*SPLQPGLPSSATLH--WCDHLQQYPPI 166
L++ CC + P LPS LH +C LQ +P I
Sbjct: 682 LLEMSCCKKLEIIPTNINLPSLEVLHFRYCTRLQTFPEI 720
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 260 NLAAESMSLVTDVVWKDRTAESCVGTAGTICVWVGTAASGRTS 132
N+A+E + L+ ++ CV +C+ VG ++SG+TS
Sbjct: 2028 NIASEQLKLLPEIRQNLEAVAHCVQNKW-LCILVGPSSSGKTS 2069
>At1g17960.1 68414.m02222 threonyl-tRNA synthetase, putative /
threonine--tRNA ligase, putative similar to SP|O04630
Threonyl-tRNA synthetase, mitochondrial precursor (EC
6.1.1.3) (Threonine--tRNA ligase) (ThrRS) {Arabidopsis
thaliana}; contains Pfam profiles PF00587: tRNA
synthetase class II core domain (G, H, P, S and T),
PF03129: Anticodon binding domain, PF02824: TGS domain
Length = 458
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 215 SRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAM 346
SRPH ++ +TLLP+ + R+WE ++ ++ S + SA+
Sbjct: 37 SRPHDPIK-ITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSAL 79
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 348 GIADDEGAEDCSNTSSGTSYSHCRCTSTNEFG 253
GI DD+G ++ + S + R T+EFG
Sbjct: 660 GIVDDDGGKESKDKESKDRFKDIRIERTDEFG 691
>At1g68110.1 68414.m07780 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related similar to clathrin assembly protein
AP180 (GI:6492344) [Xenopus laevis]; contains Pfam
profile: PF01417 ENTH domain, suggesting involvement in
endocytosis or cytoskeletal machinery
Length = 379
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 8 KAGLLLLGVLCCRAPHLIKTKCCLPPD*SPLQPG 109
K+ +LL GVLCC+ P ++ LP D S G
Sbjct: 90 KSLMLLHGVLCCKVPSVVGEFRRLPFDLSDFSDG 123
>At5g11040.1 68418.m01290 expressed protein weak similarity to
hypercellular protein [Aspergillus nidulans] GI:9309269
Length = 1186
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 243 NVLSDRCGLEGPHCRELCRDSRYHLCMGG 157
NVL R G P+ CR +H+C+ G
Sbjct: 1155 NVLRARAGTASPNEPIFCRGPPFHVCVAG 1183
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 339 DDEGAEDCSNTSSGTSYS-HCRCTSTNEFGSRVNVLSD 229
DDE ++D + SS T YS C + ++ G+ ++ D
Sbjct: 1108 DDESSDDDDDLSSETDYSDECEDSDDSDLGNEIDYSED 1145
>At3g52110.1 68416.m05719 expressed protein
Length = 362
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -3
Query: 142 VAPVQSCRRWQTWLQGRSVWRQTAFCFYKVRRATTKNTEKEETG 11
V ++S + + GR ++ + Y+++R T+ TE+E+TG
Sbjct: 136 VPRLKSTQSARNLFSGRDIFGHISDFCYELKRLATRVTEREDTG 179
>At3g48380.2 68416.m05281 expressed protein
Length = 640
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 291 SWFRSWYWNSLRLPHHRLCQEPL 359
SWFR ++ S+ +P HR Q+ L
Sbjct: 477 SWFRLQHYTSISVPSHREIQQTL 499
>At3g48380.1 68416.m05280 expressed protein
Length = 645
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 291 SWFRSWYWNSLRLPHHRLCQEPL 359
SWFR ++ S+ +P HR Q+ L
Sbjct: 482 SWFRLQHYTSISVPSHREIQQTL 504
>At5g35210.2 68418.m04175 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1409
Score = 26.6 bits (56), Expect = 9.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 150 CKWSHQCRVAEDGRPGC 100
C W H CR+ R GC
Sbjct: 724 CGWCHSCRLTSASRRGC 740
>At5g35210.1 68418.m04174 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1576
Score = 26.6 bits (56), Expect = 9.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -1
Query: 150 CKWSHQCRVAEDGRPGC 100
C W H CR+ R GC
Sbjct: 724 CGWCHSCRLTSASRRGC 740
>At5g21120.1 68418.m02518 ethylene-insensitive3-like2 (EIL2)
identical to ethylene-insensitive3-like2 (EIL2)
GI:2224929 from [Arabidopsis thaliana]
Length = 518
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 147 CSSTHPYTDGTCC--PYTALCSAVLPD 221
CSS P+T+G C +TALC + D
Sbjct: 16 CSSAPPFTEGHMCSDSHTALCDDLSSD 42
>At5g20220.1 68418.m02407 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 393
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = -1
Query: 183 SRYHLCMGGYCCKWSHQ---CRVAEDGRPGCRGDQSG 82
+RYH C G C + H CR P C G+ SG
Sbjct: 318 TRYHKC--GICGERGHNSRTCRKPTGVNPSCSGENSG 352
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 375 QLLLEGGV-PGIADDEGAEDCSNTSSGTS 292
+LL+E GV PGI D+G D + T+ T+
Sbjct: 91 ELLMENGVIPGIKVDKGVVDLAGTNGETT 119
>At3g61290.1 68416.m06859 hypothetical protein
Length = 455
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 184 QQVPSVYGWVLLQVVAPVQSCRRWQTWL-QGRSVWRQTAFCFYKVRRATTK 35
Q PS Y L +++ +++C + W+ Q VW +T + RA K
Sbjct: 24 QTCPSTYPSRLEPMISSLETCPDYFRWIQQDLKVWEETGITRETLERAKPK 74
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 234 SDRCGLEGPHCRELCRDSRY 175
+D+CG + P CR+L + RY
Sbjct: 752 ADKCGRKCPKCRQLIGNGRY 771
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,035,918
Number of Sequences: 28952
Number of extensions: 237107
Number of successful extensions: 791
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 927799552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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