Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f22
         (522 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   5.0  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   8.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 514 YCRFTRHDFSRHI 476
           + R  RH+F+RH+
Sbjct: 393 FARLLRHNFNRHL 405


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 514 YCRFTRHDFSRHI 476
           + R  RH+F+RH+
Sbjct: 400 FARLLRHNFNRHL 412


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 369 KESLKKIWRLRTKITVEPFV 428
           K+ ++   RLR +I V+PF+
Sbjct: 168 KKDIESALRLREEIKVDPFM 187


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -2

Query: 50  LCCAQYGCHEQR 15
           +CC+Q  CH  +
Sbjct: 109 ICCSQDSCHADK 120


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 388  YGGCERKSPSNRL*YVTYYRVC 453
            YGG E    +    ++ YY +C
Sbjct: 2087 YGGGEAGEETRARGFLAYYEIC 2108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,983
Number of Sequences: 336
Number of extensions: 2618
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)