Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f20
         (331 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M57574-1|AAA28620.1|  206|Drosophila melanogaster heterochromati...    27   5.7  
M14131-1|AAA28402.1|  161|Drosophila melanogaster protein ( D.me...    27   5.7  
AY061119-1|AAL28667.1|  206|Drosophila melanogaster LD10408p pro...    27   5.7  
AE014134-1427|AAN11156.1|  206|Drosophila melanogaster CG8409-PB...    27   5.7  
AE014134-1426|AAF52618.1|  206|Drosophila melanogaster CG8409-PA...    27   5.7  

>M57574-1|AAA28620.1|  206|Drosophila melanogaster
           heterochromatin-specific chromosomalprotein HP-1
           protein.
          Length = 206

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 196 GYTQLSNTYTPSKNIPCNQLATAQNYVASNNQYQPLISS 312
           GY +  NT+ P  N+ C  L   Q Y AS    +   +S
Sbjct: 47  GYPETENTWEPENNLDCQDL--IQQYEASRKDEEKSAAS 83


>M14131-1|AAA28402.1|  161|Drosophila melanogaster protein (
           D.melanogaster nonhistonechromosomal protein C1A9
           antigen mRNA, complete cds. ).
          Length = 161

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 196 GYTQLSNTYTPSKNIPCNQLATAQNYVASNNQYQPLISS 312
           GY +  NT+ P  N+ C  L   Q Y AS    +   +S
Sbjct: 47  GYPETENTWEPENNLDCQDL--IQQYEASRKDEEKSAAS 83


>AY061119-1|AAL28667.1|  206|Drosophila melanogaster LD10408p
           protein.
          Length = 206

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 196 GYTQLSNTYTPSKNIPCNQLATAQNYVASNNQYQPLISS 312
           GY +  NT+ P  N+ C  L   Q Y AS    +   +S
Sbjct: 47  GYPETENTWEPENNLDCQDL--IQQYEASRKDEEKSAAS 83


>AE014134-1427|AAN11156.1|  206|Drosophila melanogaster CG8409-PB,
           isoform B protein.
          Length = 206

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 196 GYTQLSNTYTPSKNIPCNQLATAQNYVASNNQYQPLISS 312
           GY +  NT+ P  N+ C  L   Q Y AS    +   +S
Sbjct: 47  GYPETENTWEPENNLDCQDL--IQQYEASRKDEEKSAAS 83


>AE014134-1426|AAF52618.1|  206|Drosophila melanogaster CG8409-PA,
           isoform A protein.
          Length = 206

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 196 GYTQLSNTYTPSKNIPCNQLATAQNYVASNNQYQPLISS 312
           GY +  NT+ P  N+ C  L   Q Y AS    +   +S
Sbjct: 47  GYPETENTWEPENNLDCQDL--IQQYEASRKDEEKSAAS 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,867,154
Number of Sequences: 53049
Number of extensions: 189445
Number of successful extensions: 388
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)