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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f19
         (315 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061...    67   3e-12
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987...    67   3e-12
12_02_1165 + 26633371-26633679,26635183-26635276,26635732-266358...    34   0.027
12_01_1116 + 11914352-11914415,11915049-11915158,11915254-119152...    30   0.33 
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519...    29   0.58 
11_01_0320 - 2406706-2406943,2407297-2407385,2407463-2408335,240...    27   3.1  
08_01_0069 - 483701-483997,484113-484325,484548-484727,484815-48...    27   3.1  
01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,380...    27   3.1  
04_01_0565 - 7227326-7227739,7227872-7228015,7228134-7229108           26   7.1  
12_01_0022 + 165056-165408,165477-165624,166248-166248,166305-16...    25   9.4  
06_03_0697 - 23621808-23622127,23622194-23622932,23623298-236233...    25   9.4  
02_05_0731 + 31299466-31299643,31300369-31300673,31300992-31301660     25   9.4  

>03_02_0999 -
           13105030-13105434,13105716-13105850,13105933-13106133,
           13106374-13106673,13106764-13106964,13107246-13107410,
           13107484-13107663,13108171-13108212,13108327-13108404
          Length = 568

 Score = 66.9 bits (156), Expect = 3e-12
 Identities = 30/52 (57%), Positives = 41/52 (78%)
 Frame = +1

Query: 130 MLVLFETPAGYAIFKLLDESKLSEIDNLYXEFNTPEGASTVVKLXNFVKFED 285
           MLVLFETPAG+A+FK+LDE KL ++++L+ EF T + A  VV+L  F KFE+
Sbjct: 1   MLVLFETPAGFALFKVLDEGKLDKVEDLWKEFTTSDSARKVVELKAFNKFEN 52


>03_02_0998 -
           13097675-13098079,13098307-13098441,13098522-13098722,
           13099060-13099359,13099449-13099649,13099932-13100096,
           13100170-13100349,13100896-13100937,13101040-13101117
          Length = 568

 Score = 66.9 bits (156), Expect = 3e-12
 Identities = 30/52 (57%), Positives = 41/52 (78%)
 Frame = +1

Query: 130 MLVLFETPAGYAIFKLLDESKLSEIDNLYXEFNTPEGASTVVKLXNFVKFED 285
           MLVLFETPAG+A+FK+LDE KL ++++L+ EF T + A  VV+L  F KFE+
Sbjct: 1   MLVLFETPAGFALFKVLDEGKLDKVEDLWKEFTTSDSARKVVELKAFNKFEN 52


>12_02_1165 +
           26633371-26633679,26635183-26635276,26635732-26635822,
           26636112-26636199,26636300-26636341,26636648-26636809,
           26636915-26637094,26637280-26637447,26637977-26638195
          Length = 450

 Score = 33.9 bits (74), Expect = 0.027
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +1

Query: 136 VLFETPAGYAIFKLLDESKLSEIDNLYXEFNTPEGASTVVKLXNFVKFED 285
           +LFETP+G+A+F++ D       ++++  F  P  A  VV+   F++  D
Sbjct: 172 MLFETPSGFAMFRVSD-VLFRYPEDIWSSFTDPHTAHQVVRTIGFIEVGD 220


>12_01_1116 +
           11914352-11914415,11915049-11915158,11915254-11915295,
           11916263-11916430,11916506-11916682,11916848-11917051,
           11917125-11917319
          Length = 319

 Score = 30.3 bits (65), Expect = 0.33
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +1

Query: 112 YKCASSMLVLFETPAGYAIFKLLDESKL--SEIDNLYXEFNTPEGASTVVKLXNFVKFED 285
           Y C   +LVLFETP+G+A+F +  +  +  + +  ++  F      S  + L  F + +D
Sbjct: 26  YHCLI-VLVLFETPSGFAMFGMSGDRLIQPNALQEIWANFGVDYRVSKFIWLKEFREIKD 84


>10_08_0570 +
           18851451-18851723,18851894-18851928,18851929-18851998,
           18852089-18852187,18852276-18852365,18852430-18852920,
           18853015-18853102,18853204-18853245,18853548-18853574,
           18853817-18853996,18854249-18854416,18854501-18854710
          Length = 590

 Score = 29.5 bits (63), Expect = 0.58
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +1

Query: 136 VLFETPAGYAIFKLLDESKLSEIDNLYXEFNTPEGASTVVKLXNFVK 276
           +LFETP+G+ +F++ D       ++++  F  P  A   V+   F++
Sbjct: 360 MLFETPSGFVMFRVSD-VLFRYPEDIWSSFTDPRTAHQAVRTIGFIE 405


>11_01_0320 -
           2406706-2406943,2407297-2407385,2407463-2408335,
           2408882-2409310
          Length = 542

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 208 NLYXEFNTPEGASTVVKLXNFVKFED 285
           NLY  F+   GA+ VV L ++ +FE+
Sbjct: 337 NLYYSFDAAGGAAHVVMLGSYAEFEE 362


>08_01_0069 -
           483701-483997,484113-484325,484548-484727,484815-484985,
           485655-485764,485914-485989
          Length = 348

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +1

Query: 130 MLVLFETPAGYAIF 171
           +LVLFETP G+A+F
Sbjct: 35  ILVLFETPTGFALF 48


>01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,
            3807118-3807282,3807363-3807657,3807739-3807953,
            3808125-3808430,3808539-3808602,3808735-3808974,
            3809150-3809253
          Length = 1493

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = -1

Query: 237  FWSVKFXVQVVNLTQLRLIQQLKYGIARRCLE*NQHTGSTLIQLFNKYNQY-----HLIY 73
            FW  ++ +      Q RL+   K  I +   E    TGST I+ F K NQ+     HL+ 
Sbjct: 1083 FWYQRYYIDTARELQ-RLVGVCKAPIIQHFAE--SITGSTTIRSFGKENQFVSTNSHLMD 1139

Query: 72   *VSSEKYYH 46
              S  K+Y+
Sbjct: 1140 AFSRPKFYN 1148


>04_01_0565 - 7227326-7227739,7227872-7228015,7228134-7229108
          Length = 510

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +1

Query: 109 LYKCASSMLV-LFETPAGYAIFKLLDESKLSEIDNLYXEFNTPEGASTVV 255
           LY C SSMLV +   P+  AI  L  E+ + EI +   +  T    ST+V
Sbjct: 287 LYSCGSSMLVKIGRAPSLRAIGYLDLETHVLEIGDTIIKAGTRASPSTMV 336


>12_01_0022 +
           165056-165408,165477-165624,166248-166248,166305-166602,
           166819-167387,167554-168377
          Length = 730

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = -1

Query: 171 KYGIARRCLE*NQHTGSTLIQLF----NKYNQYHLI 76
           +Y I+  C E   H  STLI LF    NKY  Y ++
Sbjct: 351 RYCISHECKEDVLHHLSTLIVLFNPDQNKYENYKIV 386


>06_03_0697 -
           23621808-23622127,23622194-23622932,23623298-23623327,
           23624183-23624200,23625176-23625268,23625665-23626123
          Length = 552

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -3

Query: 286 CPQTLQSSX-TXPLWKPLLEC*ILGTSCQSHSA*THPAT*IW-HSPPVSRIEPTYWKH 119
           C Q +QS+  +     P++   +L  SC +     + A+ ++  S P   ++PT+W+H
Sbjct: 421 CNQVIQSNAFSLSSSFPIIGDDLLENSCHAFVGINNNASSLFLDSQPPPLVDPTFWRH 478


>02_05_0731 + 31299466-31299643,31300369-31300673,31300992-31301660
          Length = 383

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -3

Query: 166 WHSPPVSRIEPTYWKHTYTTIQQIQSVSFNILSFIRKILSLT 41
           W SPP+S     Y      T Q+ Q  S N  S +   +S T
Sbjct: 185 WVSPPLSSTNEAYTAPVSQTTQRSQHTSDNTSSVMTDAISST 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,802,384
Number of Sequences: 37544
Number of extensions: 107660
Number of successful extensions: 179
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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