BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12f17 (360 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 195 2e-49 UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 177 6e-44 UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 165 2e-40 UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 144 5e-34 UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 8e-24 UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 90 1e-17 UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 2e-14 UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 68 6e-11 UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 61 7e-09 UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 56 1e-07 UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 55 3e-07 UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 54 1e-06 UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 50 2e-05 UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 48 7e-05 UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 46 3e-04 UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.002 UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 42 0.003 UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 40 0.013 UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 40 0.017 UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 39 0.023 UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 38 0.040 UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 38 0.070 UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 37 0.092 UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 37 0.092 UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 37 0.092 UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 37 0.12 UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 37 0.12 UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomon... 32 2.6 UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MA... 32 2.6 UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein;... 32 2.6 UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 32 2.6 UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 31 4.6 UniRef50_Q8ZX58 Cluster: Putative uncharacterized protein PAE144... 31 8.0 >UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila melanogaster (Fruit fly) Length = 256 Score = 195 bits (475), Expect = 2e-49 Identities = 88/103 (85%), Positives = 97/103 (94%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229 MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60 Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL+ GNVMP Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMP 103 >UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular organisms|Rep: 60S ribosomal protein L8 - Homo sapiens (Human) Length = 257 Score = 177 bits (430), Expect = 6e-44 Identities = 80/103 (77%), Positives = 90/103 (87%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L GNV+P Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103 >UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: Ribosomal protein - Codakia orbicularis Length = 234 Score = 165 bits (402), Expect = 2e-40 Identities = 73/97 (75%), Positives = 84/97 (86%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229 MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60 Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 340 V FRDPYK+K R E FIA EG+YTGQF+YCGKKA L+ Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIYCGKKANLQ 97 >UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Eukaryota|Rep: 60S ribosomal protein KD4/L2 - Arabidopsis thaliana (Mouse-ear cress) Length = 123 Score = 144 bits (348), Expect = 5e-34 Identities = 69/103 (66%), Positives = 79/103 (76%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229 MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60 Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 V FR P++FK +KELF+ E +YCGKKATL GNV+P Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLP 103 >UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma japonicum|Rep: SJCHGC07017 protein - Schistosoma japonicum (Blood fluke) Length = 112 Score = 110 bits (264), Expect = 8e-24 Identities = 50/69 (72%), Positives = 58/69 (84%) Frame = +2 Query: 62 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 241 IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60 Query: 242 DPYKFKTRK 268 D Y +K K Sbjct: 61 DVYSYKLIK 69 >UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba histolytica|Rep: 60S ribosomal protein L8 - Entamoeba histolytica Length = 158 Score = 89.8 bits (213), Expect = 1e-17 Identities = 39/62 (62%), Positives = 49/62 (79%) Frame = +2 Query: 173 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNV 352 +G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YCG KA+L GNV Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92 Query: 353 MP 358 +P Sbjct: 93 LP 94 >UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 protein - Rattus norvegicus (Rat) Length = 47 Score = 79.4 bits (187), Expect = 2e-14 Identities = 35/46 (76%), Positives = 41/46 (89%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 187 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46 >UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryarchaeota|Rep: 50S ribosomal protein L2P - Methanopyrus kandleri Length = 243 Score = 67.7 bits (158), Expect = 6e-11 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = +2 Query: 50 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226 MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60 Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 V F D + L + PEG G + CG A ++ GN +P Sbjct: 61 RVRFED-----GEERLILVPEGTKVGDIIECGVSAEIKPGNTLP 99 >UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella natans|Rep: Ribosomal protein L8 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 281 Score = 60.9 bits (141), Expect = 7e-09 Identities = 34/103 (33%), Positives = 51/103 (49%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229 MG++I AQRKG + +R G +S+ E++ IKG++ D + P Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86 Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 + F FK EL+IA E LY + + CG +A GNV+P Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLP 129 >UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermoproteales|Rep: 50S ribosomal protein L2P - Pyrobaculum aerophilum Length = 246 Score = 56.4 bits (130), Expect = 1e-07 Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 1/103 (0%) Frame = +2 Query: 50 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226 MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56 Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVM 355 + + +F A EGLY GQ V GK A+ + GN+M Sbjct: 57 KIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNIM 94 >UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum pernix Length = 238 Score = 55.2 bits (127), Expect = 3e-07 Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Frame = +2 Query: 50 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226 MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56 Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 V D +F L A EG+Y GQ + G A E GN++P Sbjct: 57 RVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILP 95 >UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus tokodaii Length = 238 Score = 53.6 bits (123), Expect = 1e-06 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Frame = +2 Query: 50 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226 MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55 Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVM 355 ++ D KF + +GL GQ + GK A + GN++ Sbjct: 56 LIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIV 93 >UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina acetivorans Length = 238 Score = 49.6 bits (113), Expect = 2e-05 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229 MG+ + +Q +G G+ K LR + + ++G V I HDP R AP+A Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRH-PRVDENSSLRGEVVGIEHDPARSAPIAK 58 Query: 230 VHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKATLEXGNVMP 358 V F+ +ELF+ A EG+ G + CG A ++ GN++P Sbjct: 59 V------AFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVP 96 >UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein L2P - Ignicoccus hospitalis KIN4/I Length = 251 Score = 47.6 bits (108), Expect = 7e-05 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226 MG+ +R QR G G+ + + AP + S + + +G V ++ HDPGR PLA Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60 Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 + + F A EG+YTGQ V G A GN++P Sbjct: 61 HIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNILP 99 >UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 - Encephalitozoon cuniculi Length = 239 Score = 45.6 bits (103), Expect = 3e-04 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +2 Query: 110 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAP 286 KK++ P ++ L Y +G V DI+H+ RGAP+A++ FK + A Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAII------SFKEDDCMVPAS 65 Query: 287 EGLYTGQFVYCGKKATLEXGNV 352 EG+YTGQ + G A ++ GN+ Sbjct: 66 EGMYTGQKILIGDDAPIDIGNI 87 >UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_3264, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 66 Score = 42.7 bits (96), Expect = 0.002 Identities = 19/24 (79%), Positives = 20/24 (83%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRK 121 MGRVIRAQRKG GS+F SHT RK Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24 >UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus plantarum Length = 279 Score = 41.9 bits (94), Expect = 0.003 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Frame = +2 Query: 68 AQRKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 241 A R G + V H R G K R +D+ + VK I +DP R A +A++ + Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97 Query: 242 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 D K +AP+GL G V G +A ++ GN +P Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALP 131 >UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and organelle form; n=5; cellular organisms|Rep: Ribosomal protein L2, bacterial and organelle form - Ostreococcus tauri Length = 294 Score = 39.9 bits (89), Expect = 0.013 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Frame = +2 Query: 65 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 241 R R AG + V H K G +L R +D+ ++G ++ + +DP R A +A+V Sbjct: 65 RGGRNNAGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD-- 120 Query: 242 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 Y+ +AP G G + G ++ ++ GN +P Sbjct: 121 --YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALP 157 >UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape) Length = 128 Score = 39.5 bits (88), Expect = 0.017 Identities = 17/30 (56%), Positives = 20/30 (66%) Frame = +2 Query: 269 ELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 E + E +YTGQFV C KKATL NV+P Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLP 69 >UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermoplasmatales|Rep: 50S ribosomal protein L2P - Thermoplasma volcanium Length = 234 Score = 39.1 bits (87), Expect = 0.023 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 1/100 (1%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229 MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL-- 51 Query: 230 VHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEXG 346 + D T K+++ IA G Y GQ + G T+ G Sbjct: 52 LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPG 87 >UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n=423; cellular organisms|Rep: Chloroplast 50S ribosomal protein L2 - Arabidopsis thaliana (Mouse-ear cress) Length = 274 Score = 38.3 bits (85), Expect = 0.040 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 2/96 (2%) Frame = +2 Query: 77 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 250 KG + + + R G K R +D+ I G + I +DP R A + ++H+ D Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGD-- 96 Query: 251 KFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 K + P G G + G + ++ GN +P Sbjct: 97 ---GEKRYILHPRGAIIGDTIVSGTEVPIKMGNALP 129 >UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular organisms|Rep: 50S ribosomal protein L2 - Methylococcus capsulatus Length = 281 Score = 37.5 bits (83), Expect = 0.070 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = +2 Query: 107 TKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 280 T+ + G K R +D+ I V+ I +DP R A +A+V +RD + + Sbjct: 57 TRHKGGGHKQFYRIVDFKRDKIDIPARVERIEYDPNRTAYIALVLYRD-----GERRYIV 111 Query: 281 APEGLYTGQFVYCGKKATLEXGNVMP 358 AP GL G + G+ A ++ GN +P Sbjct: 112 APAGLSAGSEIVAGEFAAIKVGNSLP 137 >UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep: Ribosomal protein L2 - Carsonella ruddii Length = 235 Score = 37.1 bits (82), Expect = 0.092 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Frame = +2 Query: 77 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 256 + G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLD---- 72 Query: 257 KTRKELFIAPEGLYTGQFVYCG-KKATLEXGN 349 K I L FV K +L GN Sbjct: 73 -GEKRYIIKTNNLEISNFVVSSLNKISLNSGN 103 >UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca wickerhamii Length = 218 Score = 37.1 bits (82), Expect = 0.092 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +2 Query: 74 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---R 241 R AG V H + G +L R +D+ G V+ + +DP R A LA++ R Sbjct: 102 RNAAGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAR 159 Query: 242 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 + + T +AP G+ G V CG A + G+ +P Sbjct: 160 EGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLP 198 >UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2 - Candidatus Nitrosopumilus maritimus SCM1 Length = 244 Score = 37.1 bits (82), Expect = 0.092 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%) Frame = +2 Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 223 MG+ +R+G G T K K +E+H +G + D++H+ GR APL Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57 Query: 224 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVM 355 A V F D A G G+ + G K+ +E GNV+ Sbjct: 58 AKVRFED-----GSVSFVPAVLGAKVGETLQFGLKSKIEKGNVI 96 >UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum symbiosum Length = 243 Score = 36.7 bits (81), Expect = 0.12 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Frame = +2 Query: 50 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226 MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57 Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVM 355 + F D L G G + G K+ + GNV+ Sbjct: 58 KIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNVI 95 >UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular organisms|Rep: 50S ribosomal protein L2 - Brucella melitensis Length = 277 Score = 36.7 bits (81), Expect = 0.12 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = +2 Query: 137 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 316 R +D+ R + G V+ + +DP R A +A++ + D +AP+ L G V Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117 Query: 317 CGKKATLEXGNVMP 358 G ++ GN MP Sbjct: 118 AGNSVDVKPGNAMP 131 >UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomonas neptunium ATCC 15444|Rep: Conserved domain protein - Hyphomonas neptunium (strain ATCC 15444) Length = 279 Score = 32.3 bits (70), Expect = 2.6 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Frame = +2 Query: 116 RKGAPKLRSLDYAERHGYIKGVVKDIIH---DPGRGAPLAVVHFRDPYKFKTRKELFIAP 286 R AP+ AE G GV D +H DPG A + H R + R + P Sbjct: 33 RAAAPRQADRTIAEIAGRSGGVYSDDLHAARDPGASAAFRLAHKRRLEALRMRGVVTRRP 92 Query: 287 EGLYTGQFVYCGKKATLE 340 +G + Y + ATLE Sbjct: 93 DGTWDVPADYLERAATLE 110 >UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MAP4K1 protein - Bos taurus (Bovine) Length = 847 Score = 32.3 bits (70), Expect = 2.6 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +2 Query: 110 KKRKGAPKLRSLDYAERHGYIKGVVKDII---HDPGRGAPLAVVHFRDP 247 KKR A K+ + + G +G++ D++ +PG+GAP+ + DP Sbjct: 287 KKRPSATKMLTHQLVSQPGLNRGLILDLLDKLRNPGKGAPVGEIEDEDP 335 >UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein; n=1; Babesia bovis|Rep: Mac/perforin domain containing protein - Babesia bovis Length = 752 Score = 32.3 bits (70), Expect = 2.6 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +2 Query: 191 IIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATL 337 I+ DPG A + +H+RD + + FI P+G + + C K T+ Sbjct: 442 ILLDPGYRASVVQMHWRDDAEGLSNSRHFIQPKGAWVRPYTSCHKGETI 490 >UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular organisms|Rep: 50S ribosomal protein L2 - Aquifex aeolicus Length = 304 Score = 32.3 bits (70), Expect = 2.6 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Frame = +2 Query: 65 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 241 + + + G++ H + G KL R +D+ + V I +DP R A + ++H+ Sbjct: 56 KGRSRQRGNITARH--RGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYA 113 Query: 242 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358 D K I PEGL G V E G +P Sbjct: 114 D-----GEKRYIIWPEGLKVGDTVMSISWEDAEAGKPLP 147 >UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2; n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S ribosomal protein L2 - Acanthamoeba castellanii (Amoeba) Length = 253 Score = 31.5 bits (68), Expect = 4.6 Identities = 19/71 (26%), Positives = 33/71 (46%) Frame = +2 Query: 137 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 316 R +DY I G V + +DP R + +A++ + + +APEGL G ++ Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIF 98 Query: 317 CGKKATLEXGN 349 + L+ GN Sbjct: 99 AKENIVLKPGN 109 >UniRef50_Q8ZX58 Cluster: Putative uncharacterized protein PAE1446; n=4; Pyrobaculum|Rep: Putative uncharacterized protein PAE1446 - Pyrobaculum aerophilum Length = 376 Score = 30.7 bits (66), Expect = 8.0 Identities = 11/21 (52%), Positives = 18/21 (85%) Frame = -3 Query: 241 AEVYNSQGCTSTRVMDYILNN 179 +++YN+ G T+ RV+D+ILNN Sbjct: 329 SDIYNAVGQTTKRVLDFILNN 349 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 347,390,302 Number of Sequences: 1657284 Number of extensions: 6515037 Number of successful extensions: 16058 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 15785 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16047 length of database: 575,637,011 effective HSP length: 90 effective length of database: 426,481,451 effective search space used: 12367962079 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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