Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f17
(360 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 195 2e-49
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 177 6e-44
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 165 2e-40
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 144 5e-34
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 8e-24
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 90 1e-17
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 2e-14
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 68 6e-11
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 61 7e-09
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 56 1e-07
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 55 3e-07
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 54 1e-06
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 50 2e-05
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 48 7e-05
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 46 3e-04
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.002
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 42 0.003
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 40 0.013
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 40 0.017
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 39 0.023
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 38 0.040
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 38 0.070
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 37 0.092
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 37 0.092
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 37 0.092
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 37 0.12
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 37 0.12
UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomon... 32 2.6
UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MA... 32 2.6
UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein;... 32 2.6
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 32 2.6
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 31 4.6
UniRef50_Q8ZX58 Cluster: Putative uncharacterized protein PAE144... 31 8.0
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 195 bits (475), Expect = 2e-49
Identities = 88/103 (85%), Positives = 97/103 (94%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL+ GNVMP
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMP 103
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 177 bits (430), Expect = 6e-44
Identities = 80/103 (77%), Positives = 90/103 (87%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L GNV+P
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 165 bits (402), Expect = 2e-40
Identities = 73/97 (75%), Positives = 84/97 (86%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 340
V FRDPYK+K R E FIA EG+YTGQF+YCGKKA L+
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIYCGKKANLQ 97
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 144 bits (348), Expect = 5e-34
Identities = 69/103 (66%), Positives = 79/103 (76%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
V FR P++FK +KELF+ E +YCGKKATL GNV+P
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLP 103
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 8e-24
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +2
Query: 62 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 241
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 242 DPYKFKTRK 268
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 89.8 bits (213), Expect = 1e-17
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2
Query: 173 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNV 352
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YCG KA+L GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 353 MP 358
+P
Sbjct: 93 LP 94
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 2e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 187
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 67.7 bits (158), Expect = 6e-11
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = +2
Query: 50 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
V F D + L + PEG G + CG A ++ GN +P
Sbjct: 61 RVRFED-----GEERLILVPEGTKVGDIIECGVSAEIKPGNTLP 99
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 60.9 bits (141), Expect = 7e-09
Identities = 34/103 (33%), Positives = 51/103 (49%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
+ F FK EL+IA E LY + + CG +A GNV+P
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLP 129
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 56.4 bits (130), Expect = 1e-07
Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +2
Query: 50 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVM 355
+ + +F A EGLY GQ V GK A+ + GN+M
Sbjct: 57 KIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNIM 94
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 55.2 bits (127), Expect = 3e-07
Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 50 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
V D +F L A EG+Y GQ + G A E GN++P
Sbjct: 57 RVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILP 95
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 53.6 bits (123), Expect = 1e-06
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVM 355
++ D KF + +GL GQ + GK A + GN++
Sbjct: 56 LIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIV 93
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 49.6 bits (113), Expect = 2e-05
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
MG+ + +Q +G G+ K LR + + ++G V I HDP R AP+A
Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRH-PRVDENSSLRGEVVGIEHDPARSAPIAK 58
Query: 230 VHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKATLEXGNVMP 358
V F+ +ELF+ A EG+ G + CG A ++ GN++P
Sbjct: 59 V------AFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVP 96
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 47.6 bits (108), Expect = 7e-05
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226
MG+ +R QR G G+ + + AP + S + + +G V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
+ + F A EG+YTGQ V G A GN++P
Sbjct: 61 HIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNILP 99
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 45.6 bits (103), Expect = 3e-04
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 110 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAP 286
KK++ P ++ L Y +G V DI+H+ RGAP+A++ FK + A
Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAII------SFKEDDCMVPAS 65
Query: 287 EGLYTGQFVYCGKKATLEXGNV 352
EG+YTGQ + G A ++ GN+
Sbjct: 66 EGMYTGQKILIGDDAPIDIGNI 87
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.002
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRK 121
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 41.9 bits (94), Expect = 0.003
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +2
Query: 68 AQRKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 241
A R G + V H R G K R +D+ + VK I +DP R A +A++ +
Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97
Query: 242 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
D K +AP+GL G V G +A ++ GN +P
Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALP 131
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 39.9 bits (89), Expect = 0.013
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +2
Query: 65 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 241
R R AG + V H K G +L R +D+ ++G ++ + +DP R A +A+V
Sbjct: 65 RGGRNNAGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD-- 120
Query: 242 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
Y+ +AP G G + G ++ ++ GN +P
Sbjct: 121 --YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALP 157
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 39.5 bits (88), Expect = 0.017
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 269 ELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
E + E +YTGQFV C KKATL NV+P
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLP 69
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 39.1 bits (87), Expect = 0.023
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL-- 51
Query: 230 VHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEXG 346
+ D T K+++ IA G Y GQ + G T+ G
Sbjct: 52 LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPG 87
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 38.3 bits (85), Expect = 0.040
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +2
Query: 77 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 250
KG + + + R G K R +D+ I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGD-- 96
Query: 251 KFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
K + P G G + G + ++ GN +P
Sbjct: 97 ---GEKRYILHPRGAIIGDTIVSGTEVPIKMGNALP 129
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 37.5 bits (83), Expect = 0.070
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 107 TKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 280
T+ + G K R +D+ I V+ I +DP R A +A+V +RD + +
Sbjct: 57 TRHKGGGHKQFYRIVDFKRDKIDIPARVERIEYDPNRTAYIALVLYRD-----GERRYIV 111
Query: 281 APEGLYTGQFVYCGKKATLEXGNVMP 358
AP GL G + G+ A ++ GN +P
Sbjct: 112 APAGLSAGSEIVAGEFAAIKVGNSLP 137
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 37.1 bits (82), Expect = 0.092
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 77 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 256
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLD---- 72
Query: 257 KTRKELFIAPEGLYTGQFVYCG-KKATLEXGN 349
K I L FV K +L GN
Sbjct: 73 -GEKRYIIKTNNLEISNFVVSSLNKISLNSGN 103
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 37.1 bits (82), Expect = 0.092
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +2
Query: 74 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---R 241
R AG V H + G +L R +D+ G V+ + +DP R A LA++ R
Sbjct: 102 RNAAGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAR 159
Query: 242 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
+ + T +AP G+ G V CG A + G+ +P
Sbjct: 160 EGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLP 198
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 37.1 bits (82), Expect = 0.092
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 223
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 224 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVM 355
A V F D A G G+ + G K+ +E GNV+
Sbjct: 58 AKVRFED-----GSVSFVPAVLGAKVGETLQFGLKSKIEKGNVI 96
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 36.7 bits (81), Expect = 0.12
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +2
Query: 50 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 226
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 227 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVM 355
+ F D L G G + G K+ + GNV+
Sbjct: 58 KIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNVI 95
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 36.7 bits (81), Expect = 0.12
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2
Query: 137 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 316
R +D+ R + G V+ + +DP R A +A++ + D +AP+ L G V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 317 CGKKATLEXGNVMP 358
G ++ GN MP
Sbjct: 118 AGNSVDVKPGNAMP 131
>UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomonas
neptunium ATCC 15444|Rep: Conserved domain protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 279
Score = 32.3 bits (70), Expect = 2.6
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +2
Query: 116 RKGAPKLRSLDYAERHGYIKGVVKDIIH---DPGRGAPLAVVHFRDPYKFKTRKELFIAP 286
R AP+ AE G GV D +H DPG A + H R + R + P
Sbjct: 33 RAAAPRQADRTIAEIAGRSGGVYSDDLHAARDPGASAAFRLAHKRRLEALRMRGVVTRRP 92
Query: 287 EGLYTGQFVYCGKKATLE 340
+G + Y + ATLE
Sbjct: 93 DGTWDVPADYLERAATLE 110
>UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep:
MAP4K1 protein - Bos taurus (Bovine)
Length = 847
Score = 32.3 bits (70), Expect = 2.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 110 KKRKGAPKLRSLDYAERHGYIKGVVKDII---HDPGRGAPLAVVHFRDP 247
KKR A K+ + + G +G++ D++ +PG+GAP+ + DP
Sbjct: 287 KKRPSATKMLTHQLVSQPGLNRGLILDLLDKLRNPGKGAPVGEIEDEDP 335
>UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein;
n=1; Babesia bovis|Rep: Mac/perforin domain containing
protein - Babesia bovis
Length = 752
Score = 32.3 bits (70), Expect = 2.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 191 IIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATL 337
I+ DPG A + +H+RD + + FI P+G + + C K T+
Sbjct: 442 ILLDPGYRASVVQMHWRDDAEGLSNSRHFIQPKGAWVRPYTSCHKGETI 490
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 32.3 bits (70), Expect = 2.6
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +2
Query: 65 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 241
+ + + G++ H + G KL R +D+ + V I +DP R A + ++H+
Sbjct: 56 KGRSRQRGNITARH--RGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYA 113
Query: 242 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
D K I PEGL G V E G +P
Sbjct: 114 D-----GEKRYIIWPEGLKVGDTVMSISWEDAEAGKPLP 147
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 31.5 bits (68), Expect = 4.6
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +2
Query: 137 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 316
R +DY I G V + +DP R + +A++ + + +APEGL G ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIF 98
Query: 317 CGKKATLEXGN 349
+ L+ GN
Sbjct: 99 AKENIVLKPGN 109
>UniRef50_Q8ZX58 Cluster: Putative uncharacterized protein PAE1446;
n=4; Pyrobaculum|Rep: Putative uncharacterized protein
PAE1446 - Pyrobaculum aerophilum
Length = 376
Score = 30.7 bits (66), Expect = 8.0
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -3
Query: 241 AEVYNSQGCTSTRVMDYILNN 179
+++YN+ G T+ RV+D+ILNN
Sbjct: 329 SDIYNAVGQTTKRVLDFILNN 349
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,390,302
Number of Sequences: 1657284
Number of extensions: 6515037
Number of successful extensions: 16058
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 15785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16047
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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