Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f17
         (360 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p pro...   195   2e-50
AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p pro...   195   2e-50
AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal pr...   195   2e-50
AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,...   195   2e-50
AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,...   195   2e-50
BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p pro...   118   2e-27
AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA...    27   7.2  
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB...    27   7.2  

>BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p
           protein.
          Length = 256

 Score =  195 bits (475), Expect = 2e-50
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = +2

Query: 50  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL+ GNVMP
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMP 103


>AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p
           protein.
          Length = 256

 Score =  195 bits (475), Expect = 2e-50
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = +2

Query: 50  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL+ GNVMP
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMP 103


>AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal
           protein L8 protein.
          Length = 256

 Score =  195 bits (475), Expect = 2e-50
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = +2

Query: 50  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL+ GNVMP
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMP 103


>AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,
           isoform B protein.
          Length = 256

 Score =  195 bits (475), Expect = 2e-50
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = +2

Query: 50  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL+ GNVMP
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMP 103


>AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,
           isoform A protein.
          Length = 256

 Score =  195 bits (475), Expect = 2e-50
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = +2

Query: 50  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 229
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 230 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL+ GNVMP
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMP 103


>BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p
           protein.
          Length = 579

 Score =  118 bits (284), Expect = 2e-27
 Identities = 50/58 (86%), Positives = 56/58 (96%)
 Frame = +2

Query: 185 KDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 358
           KDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL+ GNVMP
Sbjct: 1   KDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMP 58


>AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA,
            isoform A protein.
          Length = 2602

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 176  GVVKDIIHDPGRGAPLAVVHF-RDPYKFKTRKELF 277
            GVV  ++   G G   A + + R P+K + RKE+F
Sbjct: 1680 GVVSGVLMGSGSGGSTACLTYNRVPWKLRVRKEVF 1714


>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
            isoform B protein.
          Length = 2693

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 176  GVVKDIIHDPGRGAPLAVVHF-RDPYKFKTRKELF 277
            GVV  ++   G G   A + + R P+K + RKE+F
Sbjct: 1771 GVVSGVLMGSGSGGSTACLTYNRVPWKLRVRKEVF 1805


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,616,780
Number of Sequences: 53049
Number of extensions: 306210
Number of successful extensions: 669
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)