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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f16
         (552 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0519 - 34481751-34482722                                         32   0.26 
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496...    31   0.61 
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150...    30   1.1  
01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872     30   1.4  
01_01_0219 + 1863478-1864041,1864459-1865109                           29   1.9  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   2.5  
01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164...    29   2.5  
10_08_0271 - 16382655-16384451                                         29   3.3  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   3.3  
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325...    29   3.3  
01_02_0108 - 11200964-11201338                                         29   3.3  
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161...    28   4.3  
08_01_0252 + 2060214-2060587,2060710-2061166                           28   5.7  
05_05_0298 - 23926266-23926442,23926573-23926632,23926822-239270...    28   5.7  
05_04_0002 + 17031662-17032264                                         28   5.7  
03_03_0142 + 14800317-14801240                                         28   5.7  
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133...    27   7.5  
10_01_0129 + 1535823-1537196                                           27   7.5  
04_04_0545 + 26141335-26141793,26141883-26141981                       27   7.5  
04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099     27   7.5  
01_07_0082 - 40965947-40967023                                         27   7.5  
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38...    27   10.0 
04_04_1383 - 33144047-33144603,33145554-33147129                       27   10.0 
04_04_1351 - 32827136-32827984                                         27   10.0 
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597...    27   10.0 
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892...    27   10.0 
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647...    27   10.0 

>03_06_0519 - 34481751-34482722
          Length = 323

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 105 GCSAPPVVATLTSSIPNRSHRGPGAVPFHQAQRALSATDKEMSRK 239
           G  APP  ++ T +   RS R  GA P H A+   S+T+   S +
Sbjct: 28  GAEAPPATSSSTPTTARRSKRLAGAPPDHPAEAGPSSTNARRSSR 72


>02_05_1147 -
           34447519-34448042,34448126-34449092,34449458-34449657,
           34449867-34450051,34450130-34450228,34450316-34450357,
           34450516-34450860,34450956-34451101,34451213-34451296,
           34451424-34451502,34451596-34451675,34451824-34451875,
           34451992-34452026
          Length = 945

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 158 EPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATN 268
           + P+ G  A  P A STF H Q   P ATN +++  N
Sbjct: 586 QAPQAG--APYPQAASTFPHSQASHPAATNPSTIPQN 620


>01_05_0564 +
           23312419-23312987,23314652-23314751,23314832-23315055,
           23315212-23316041,23316161-23316275,23316786-23316905,
           23317410-23317450,23317546-23317595,23317684-23317719,
           23317836-23317856
          Length = 701

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 158 EPPRTGRRAVPPS--ATSTFSHGQGDEPKATNGTSVATNGQST 280
           + PR+G  ++  S  A ST +HGQ    +   G  + +N QST
Sbjct: 410 QSPRSGGTSLNSSGFAASTVNHGQSSVVRTQGGNGIPSNNQST 452


>01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872
          Length = 686

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2

Query: 89  ARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSH 217
           A L +R  RPP GG T +  + P+ P          AT  F H
Sbjct: 171 ASLYTRAPRPPRGGKTYLLTAAPQCPYPDASLAAALATGLFDH 213


>01_01_0219 + 1863478-1864041,1864459-1865109
          Length = 404

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -1

Query: 207 VLVALGGTARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPT 70
           +L +L  ++ RP++  S S     VWPPP   ST     +P   PT
Sbjct: 46  MLHSLVPSSSRPIMQPSPSPETPCVWPPPLPSSTPTPAPSPPSTPT 91


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 17/33 (51%), Positives = 17/33 (51%)
 Frame = -1

Query: 192 GGTARRPVLGGSGSESKMLVWPPPGGRSTLLDR 94
           GG A R VLGG G     L  PP GGR   L R
Sbjct: 140 GGGAPRRVLGGGGGGGA-LARPPGGGRGGALGR 171


>01_07_0046 -
           40714701-40714763,40715266-40715343,40716398-40716462,
           40717075-40717201,40717279-40717319,40717621-40717690,
           40718070-40718191,40719047-40719107,40719182-40719292,
           40719387-40719461,40719815-40719842,40719929-40719978,
           40720228-40720290,40720385-40720426,40720562-40720631,
           40720663-40720713,40721857-40722041,40722374-40722775
          Length = 567

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 21/49 (42%), Positives = 25/49 (51%)
 Frame = -1

Query: 195 LGGTARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPTLNGVEVI 49
           LG TAR P    S +  + +V PPP  RST   R A + RPT   V  I
Sbjct: 124 LGRTARSP----SPALGRNIVEPPPTVRSTSAGRPAVASRPTTTVVPPI 168


>10_08_0271 - 16382655-16384451
          Length = 598

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 10/71 (14%)
 Frame = +2

Query: 92  RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVP----------PSATSTFSHGQGDEPKA 241
           R +S V R  GGG T+     P PP  G  A P          PS  +T  H +     A
Sbjct: 64  RKASPVDRGGGGGGTSFSGHSPSPPDAGGSAKPESPHDSGVKAPSELTTVEHTKQPSEPA 123

Query: 242 TNGTSVATNGQ 274
           + GT     G+
Sbjct: 124 STGTESDDGGK 134


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = +2

Query: 116 PPGGGHTNIFDSEPEPPRTGRRAV-PPSATSTFSHGQGDEPKATNGTSVATNGQSTP 283
           PP  G  N F + P PP   R +   P+  +T S G    P      +  TNG   P
Sbjct: 653 PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVP 709


>09_06_0172 +
           21329904-21331512,21331595-21331740,21332333-21332556,
           21333689-21334448
          Length = 912

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 155 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNG 271
           P PP     A PP   S + +G G  P    G +VA  G
Sbjct: 167 PPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGG 205


>01_02_0108 - 11200964-11201338
          Length = 124

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = +2

Query: 50  MTSTPFNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST 208
           M ST  NVGL+  A  +S ++RP  G    +F   P   R G  AV  S  +T
Sbjct: 1   MASTLTNVGLSTPAAAASSLVRPVAGAGRVVF---PRVGRGGFAAVRASGPAT 50


>04_03_1049 +
           22015053-22015083,22015770-22015885,22016013-22016108,
           22016229-22016285,22016468-22016620,22016754-22016838,
           22017097-22017187,22017324-22017488,22017813-22017932,
           22018020-22018104,22018234-22018402,22019055-22019173,
           22019250-22019440,22019746-22019957,22020905-22021500,
           22022538-22022658,22023439-22023868,22024412-22024797,
           22024976-22025071,22025380-22025432,22026915-22027061,
           22027139-22027309,22027880-22027962,22028049-22028247,
           22028668-22028789,22029752-22029818,22029960-22030010,
           22030768-22031001,22031263-22031451,22032455-22032646,
           22032742-22032936
          Length = 1673

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +1

Query: 151 RTGATEDRAPCRSTKRN---EHFQPRTRR*AESDQRHFSSDQRSVHS*GEPGATDPAGG 318
           RTG  E R     T+R    E  +P  R  A + +R  +++QR   +  + G +DPAGG
Sbjct: 575 RTGGVERRRREPVTRRRGGKERRRPSWRALAANRRRGEAANQRRGEAATQRGGSDPAGG 633


>08_01_0252 + 2060214-2060587,2060710-2061166
          Length = 276

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 457 VWFGLPQARGEPAGGDPDA 401
           V++GL Q RG+ +GGD DA
Sbjct: 85  VFYGLAQCRGDVSGGDCDA 103


>05_05_0298 -
           23926266-23926442,23926573-23926632,23926822-23927029,
           23927471-23927703,23928806-23928860,23928943-23929649
          Length = 479

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 452 PHPLAVSLYNQIFDFHLTHIMSQICIEAKFFLR 550
           PHP  ++L++   D H  H++ ++C   + F R
Sbjct: 96  PHPNVINLHDVYEDVHGVHLVLELCSGGELFDR 128


>05_04_0002 + 17031662-17032264
          Length = 200

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +2

Query: 170 TGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTP 283
           +G+R  P S+TST + G GD+ +    +S +++  ++P
Sbjct: 54  SGKRGPPTSSTSTMASG-GDDDEEEGASSSSSSADTSP 90


>03_03_0142 + 14800317-14801240
          Length = 307

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 155 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSV 259
           P P R G  A  P+A +T   G   E  +T GTS+
Sbjct: 198 PPPARKGLSACNPAAATTTPGGAAAESASTAGTSL 232


>10_06_0085 +
           10511258-10512327,10512978-10513058,10513318-10513396,
           10514160-10514201
          Length = 423

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 96  YQAGCSAPPVVATLTSSIPNRSHRGPGAVPFHQAQRALS 212
           Y+A CSA P + T  +++  R+ R   AV      R+LS
Sbjct: 33  YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLS 71


>10_01_0129 + 1535823-1537196
          Length = 457

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = -1

Query: 186 TARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPTLNG 61
           + RR   GG G         PPGG S L   R  S RP  +G
Sbjct: 5   SGRRLAAGGGGGGGGAPRGSPPGGGSPLNSSRRSSRRPRPSG 46


>04_04_0545 + 26141335-26141793,26141883-26141981
          Length = 185

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +2

Query: 77  LNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPS 196
           L  GA+ SSR   PPG G  +       PP TGRR +  S
Sbjct: 14  LLSGAQPSSRRATPPGNGQRS-----RRPPATGRRRLAAS 48


>04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099
          Length = 292

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 71  VGLNDGARLSSRVLRPPGGGHTNI--FDSEPEPPRTGRRAVPPSATSTFSHG 220
           VGL+DG  + SRVL    G H+ +  +    EP  +GR  V   A     HG
Sbjct: 169 VGLDDGTVIRSRVLVGCDGVHSAVARWLGMAEPASSGRSCVRGLAVYPGGHG 220


>01_07_0082 - 40965947-40967023
          Length = 358

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 116 PPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNG 250
           PP  G+   + ++P PP+ G    PP   + +  G G  P+A  G
Sbjct: 257 PPQYGYG--YPAQPPPPQAGYGYPPPPPQAGYGGGYGYPPQAGYG 299


>06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-388276,
            388355-388482,388914-389048,389122-389250,389620-389787,
            389897-390019,390099-390227,390543-390866,390946-392901
          Length = 1448

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 117  PPVVATLTSSIPNRSHRGPGAVPF 188
            PP  A   + IP++S  GPG+V +
Sbjct: 1211 PPTKALFQNGIPDQSSNGPGSVSY 1234


>04_04_1383 - 33144047-33144603,33145554-33147129
          Length = 710

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 104 RVLRPPGGGHTNIFDSEPE-PPRTGRRAVPPSAT 202
           + +RPP         S+P  PPR   RAVPP AT
Sbjct: 38  QAVRPPPAAVGGGSHSQPTFPPRAPVRAVPPPAT 71


>04_04_1351 - 32827136-32827984
          Length = 282

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 122 GGGHTNIFDSEPEPPRT--GRRAVPPSATST 208
           GG     +   P PP+   GR+A PPS T T
Sbjct: 161 GGSGGGGYSPSPSPPKRHGGRKACPPSPTPT 191


>03_02_0155 -
           5974118-5974173,5974242-5974314,5974393-5974500,
           5975189-5976914,5977065-5977620,5978008-5978485
          Length = 998

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +2

Query: 149 SEPEPPRTGRRAVPPSATSTFSHGQ--GDEPKATNGTSVATNG 271
           S P PP +    VPPS T+  + GQ    EP+   G +    G
Sbjct: 94  SPPPPPPSSPPPVPPSPTAAPTTGQSWNSEPERKEGATATDVG 136


>01_06_0565 +
           30287253-30287502,30287522-30289010,30289133-30289277,
           30289679-30289729
          Length = 644

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +2

Query: 122 GGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKA-TNGTSVAT-NGQSTP 283
           GGG+T      P  P +G     P     ++    D P + ++G+S  T  G STP
Sbjct: 250 GGGYTPTPSDTPPSPSSGSSPTTPGGGGGYTPTPSDTPPSPSSGSSRTTPGGCSTP 305


>01_01_0829 +
           6471032-6471870,6472490-6472685,6472772-6472956,
           6473206-6473539,6473629-6473833,6474927-6475033,
           6475117-6475269
          Length = 672

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +2

Query: 98  SSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHG 220
           S R+ +P            P PPR  R  V  S T+ + HG
Sbjct: 132 SGRLAKPLSSCSAAATPPAPTPPRAARHDVLGSGTANYGHG 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,193,675
Number of Sequences: 37544
Number of extensions: 296414
Number of successful extensions: 1262
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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