BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12f16 (552 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0519 - 34481751-34482722 32 0.26 02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 31 0.61 01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 30 1.1 01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872 30 1.4 01_01_0219 + 1863478-1864041,1864459-1865109 29 1.9 07_03_1136 + 24218601-24218734,24218769-24219906 29 2.5 01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164... 29 2.5 10_08_0271 - 16382655-16384451 29 3.3 10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.3 09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 29 3.3 01_02_0108 - 11200964-11201338 29 3.3 04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161... 28 4.3 08_01_0252 + 2060214-2060587,2060710-2061166 28 5.7 05_05_0298 - 23926266-23926442,23926573-23926632,23926822-239270... 28 5.7 05_04_0002 + 17031662-17032264 28 5.7 03_03_0142 + 14800317-14801240 28 5.7 10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 27 7.5 10_01_0129 + 1535823-1537196 27 7.5 04_04_0545 + 26141335-26141793,26141883-26141981 27 7.5 04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099 27 7.5 01_07_0082 - 40965947-40967023 27 7.5 06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 27 10.0 04_04_1383 - 33144047-33144603,33145554-33147129 27 10.0 04_04_1351 - 32827136-32827984 27 10.0 03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 27 10.0 01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 27 10.0 01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 27 10.0 >03_06_0519 - 34481751-34482722 Length = 323 Score = 32.3 bits (70), Expect = 0.26 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +3 Query: 105 GCSAPPVVATLTSSIPNRSHRGPGAVPFHQAQRALSATDKEMSRK 239 G APP ++ T + RS R GA P H A+ S+T+ S + Sbjct: 28 GAEAPPATSSSTPTTARRSKRLAGAPPDHPAEAGPSSTNARRSSR 72 >02_05_1147 - 34447519-34448042,34448126-34449092,34449458-34449657, 34449867-34450051,34450130-34450228,34450316-34450357, 34450516-34450860,34450956-34451101,34451213-34451296, 34451424-34451502,34451596-34451675,34451824-34451875, 34451992-34452026 Length = 945 Score = 31.1 bits (67), Expect = 0.61 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +2 Query: 158 EPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATN 268 + P+ G A P A STF H Q P ATN +++ N Sbjct: 586 QAPQAG--APYPQAASTFPHSQASHPAATNPSTIPQN 620 >01_05_0564 + 23312419-23312987,23314652-23314751,23314832-23315055, 23315212-23316041,23316161-23316275,23316786-23316905, 23317410-23317450,23317546-23317595,23317684-23317719, 23317836-23317856 Length = 701 Score = 30.3 bits (65), Expect = 1.1 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +2 Query: 158 EPPRTGRRAVPPS--ATSTFSHGQGDEPKATNGTSVATNGQST 280 + PR+G ++ S A ST +HGQ + G + +N QST Sbjct: 410 QSPRSGGTSLNSSGFAASTVNHGQSSVVRTQGGNGIPSNNQST 452 >01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872 Length = 686 Score = 29.9 bits (64), Expect = 1.4 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = +2 Query: 89 ARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSH 217 A L +R RPP GG T + + P+ P AT F H Sbjct: 171 ASLYTRAPRPPRGGKTYLLTAAPQCPYPDASLAAALATGLFDH 213 >01_01_0219 + 1863478-1864041,1864459-1865109 Length = 404 Score = 29.5 bits (63), Expect = 1.9 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -1 Query: 207 VLVALGGTARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPT 70 +L +L ++ RP++ S S VWPPP ST +P PT Sbjct: 46 MLHSLVPSSSRPIMQPSPSPETPCVWPPPLPSSTPTPAPSPPSTPT 91 >07_03_1136 + 24218601-24218734,24218769-24219906 Length = 423 Score = 29.1 bits (62), Expect = 2.5 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = -1 Query: 192 GGTARRPVLGGSGSESKMLVWPPPGGRSTLLDR 94 GG A R VLGG G L PP GGR L R Sbjct: 140 GGGAPRRVLGGGGGGGA-LARPPGGGRGGALGR 171 >01_07_0046 - 40714701-40714763,40715266-40715343,40716398-40716462, 40717075-40717201,40717279-40717319,40717621-40717690, 40718070-40718191,40719047-40719107,40719182-40719292, 40719387-40719461,40719815-40719842,40719929-40719978, 40720228-40720290,40720385-40720426,40720562-40720631, 40720663-40720713,40721857-40722041,40722374-40722775 Length = 567 Score = 29.1 bits (62), Expect = 2.5 Identities = 21/49 (42%), Positives = 25/49 (51%) Frame = -1 Query: 195 LGGTARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPTLNGVEVI 49 LG TAR P S + + +V PPP RST R A + RPT V I Sbjct: 124 LGRTARSP----SPALGRNIVEPPPTVRSTSAGRPAVASRPTTTVVPPI 168 >10_08_0271 - 16382655-16384451 Length = 598 Score = 28.7 bits (61), Expect = 3.3 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 10/71 (14%) Frame = +2 Query: 92 RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVP----------PSATSTFSHGQGDEPKA 241 R +S V R GGG T+ P PP G A P PS +T H + A Sbjct: 64 RKASPVDRGGGGGGTSFSGHSPSPPDAGGSAKPESPHDSGVKAPSELTTVEHTKQPSEPA 123 Query: 242 TNGTSVATNGQ 274 + GT G+ Sbjct: 124 STGTESDDGGK 134 >10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379, 1211452-1211878,1212091-1213219,1213623-1213746, 1214207-1214278,1215480-1215578,1215617-1215640, 1215704-1215745,1215815-1215895,1215983-1216114, 1216115-1216196,1216271-1216365,1218499-1218570, 1218676-1218792,1219379-1219447,1219521-1219587, 1219886-1220025 Length = 1269 Score = 28.7 bits (61), Expect = 3.3 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Frame = +2 Query: 116 PPGGGHTNIFDSEPEPPRTGRRAV-PPSATSTFSHGQGDEPKATNGTSVATNGQSTP 283 PP G N F + P PP R + P+ +T S G P + TNG P Sbjct: 653 PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVP 709 >09_06_0172 + 21329904-21331512,21331595-21331740,21332333-21332556, 21333689-21334448 Length = 912 Score = 28.7 bits (61), Expect = 3.3 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +2 Query: 155 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNG 271 P PP A PP S + +G G P G +VA G Sbjct: 167 PPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGG 205 >01_02_0108 - 11200964-11201338 Length = 124 Score = 28.7 bits (61), Expect = 3.3 Identities = 20/53 (37%), Positives = 26/53 (49%) Frame = +2 Query: 50 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST 208 M ST NVGL+ A +S ++RP G +F P R G AV S +T Sbjct: 1 MASTLTNVGLSTPAAAASSLVRPVAGAGRVVF---PRVGRGGFAAVRASGPAT 50 >04_03_1049 + 22015053-22015083,22015770-22015885,22016013-22016108, 22016229-22016285,22016468-22016620,22016754-22016838, 22017097-22017187,22017324-22017488,22017813-22017932, 22018020-22018104,22018234-22018402,22019055-22019173, 22019250-22019440,22019746-22019957,22020905-22021500, 22022538-22022658,22023439-22023868,22024412-22024797, 22024976-22025071,22025380-22025432,22026915-22027061, 22027139-22027309,22027880-22027962,22028049-22028247, 22028668-22028789,22029752-22029818,22029960-22030010, 22030768-22031001,22031263-22031451,22032455-22032646, 22032742-22032936 Length = 1673 Score = 28.3 bits (60), Expect = 4.3 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = +1 Query: 151 RTGATEDRAPCRSTKRN---EHFQPRTRR*AESDQRHFSSDQRSVHS*GEPGATDPAGG 318 RTG E R T+R E +P R A + +R +++QR + + G +DPAGG Sbjct: 575 RTGGVERRRREPVTRRRGGKERRRPSWRALAANRRRGEAANQRRGEAATQRGGSDPAGG 633 >08_01_0252 + 2060214-2060587,2060710-2061166 Length = 276 Score = 27.9 bits (59), Expect = 5.7 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -3 Query: 457 VWFGLPQARGEPAGGDPDA 401 V++GL Q RG+ +GGD DA Sbjct: 85 VFYGLAQCRGDVSGGDCDA 103 >05_05_0298 - 23926266-23926442,23926573-23926632,23926822-23927029, 23927471-23927703,23928806-23928860,23928943-23929649 Length = 479 Score = 27.9 bits (59), Expect = 5.7 Identities = 10/33 (30%), Positives = 19/33 (57%) Frame = +2 Query: 452 PHPLAVSLYNQIFDFHLTHIMSQICIEAKFFLR 550 PHP ++L++ D H H++ ++C + F R Sbjct: 96 PHPNVINLHDVYEDVHGVHLVLELCSGGELFDR 128 >05_04_0002 + 17031662-17032264 Length = 200 Score = 27.9 bits (59), Expect = 5.7 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = +2 Query: 170 TGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTP 283 +G+R P S+TST + G GD+ + +S +++ ++P Sbjct: 54 SGKRGPPTSSTSTMASG-GDDDEEEGASSSSSSADTSP 90 >03_03_0142 + 14800317-14801240 Length = 307 Score = 27.9 bits (59), Expect = 5.7 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +2 Query: 155 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSV 259 P P R G A P+A +T G E +T GTS+ Sbjct: 198 PPPARKGLSACNPAAATTTPGGAAAESASTAGTSL 232 >10_06_0085 + 10511258-10512327,10512978-10513058,10513318-10513396, 10514160-10514201 Length = 423 Score = 27.5 bits (58), Expect = 7.5 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +3 Query: 96 YQAGCSAPPVVATLTSSIPNRSHRGPGAVPFHQAQRALS 212 Y+A CSA P + T +++ R+ R AV R+LS Sbjct: 33 YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLS 71 >10_01_0129 + 1535823-1537196 Length = 457 Score = 27.5 bits (58), Expect = 7.5 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 186 TARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPTLNG 61 + RR GG G PPGG S L R S RP +G Sbjct: 5 SGRRLAAGGGGGGGGAPRGSPPGGGSPLNSSRRSSRRPRPSG 46 >04_04_0545 + 26141335-26141793,26141883-26141981 Length = 185 Score = 27.5 bits (58), Expect = 7.5 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = +2 Query: 77 LNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPS 196 L GA+ SSR PPG G + PP TGRR + S Sbjct: 14 LLSGAQPSSRRATPPGNGQRS-----RRPPATGRRRLAAS 48 >04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099 Length = 292 Score = 27.5 bits (58), Expect = 7.5 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = +2 Query: 71 VGLNDGARLSSRVLRPPGGGHTNI--FDSEPEPPRTGRRAVPPSATSTFSHG 220 VGL+DG + SRVL G H+ + + EP +GR V A HG Sbjct: 169 VGLDDGTVIRSRVLVGCDGVHSAVARWLGMAEPASSGRSCVRGLAVYPGGHG 220 >01_07_0082 - 40965947-40967023 Length = 358 Score = 27.5 bits (58), Expect = 7.5 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +2 Query: 116 PPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNG 250 PP G+ + ++P PP+ G PP + + G G P+A G Sbjct: 257 PPQYGYG--YPAQPPPPQAGYGYPPPPPQAGYGGGYGYPPQAGYG 299 >06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-388276, 388355-388482,388914-389048,389122-389250,389620-389787, 389897-390019,390099-390227,390543-390866,390946-392901 Length = 1448 Score = 27.1 bits (57), Expect = 10.0 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 117 PPVVATLTSSIPNRSHRGPGAVPF 188 PP A + IP++S GPG+V + Sbjct: 1211 PPTKALFQNGIPDQSSNGPGSVSY 1234 >04_04_1383 - 33144047-33144603,33145554-33147129 Length = 710 Score = 27.1 bits (57), Expect = 10.0 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = +2 Query: 104 RVLRPPGGGHTNIFDSEPE-PPRTGRRAVPPSAT 202 + +RPP S+P PPR RAVPP AT Sbjct: 38 QAVRPPPAAVGGGSHSQPTFPPRAPVRAVPPPAT 71 >04_04_1351 - 32827136-32827984 Length = 282 Score = 27.1 bits (57), Expect = 10.0 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%) Frame = +2 Query: 122 GGGHTNIFDSEPEPPRT--GRRAVPPSATST 208 GG + P PP+ GR+A PPS T T Sbjct: 161 GGSGGGGYSPSPSPPKRHGGRKACPPSPTPT 191 >03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500, 5975189-5976914,5977065-5977620,5978008-5978485 Length = 998 Score = 27.1 bits (57), Expect = 10.0 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = +2 Query: 149 SEPEPPRTGRRAVPPSATSTFSHGQ--GDEPKATNGTSVATNG 271 S P PP + VPPS T+ + GQ EP+ G + G Sbjct: 94 SPPPPPPSSPPPVPPSPTAAPTTGQSWNSEPERKEGATATDVG 136 >01_06_0565 + 30287253-30287502,30287522-30289010,30289133-30289277, 30289679-30289729 Length = 644 Score = 27.1 bits (57), Expect = 10.0 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = +2 Query: 122 GGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKA-TNGTSVAT-NGQSTP 283 GGG+T P P +G P ++ D P + ++G+S T G STP Sbjct: 250 GGGYTPTPSDTPPSPSSGSSPTTPGGGGGYTPTPSDTPPSPSSGSSRTTPGGCSTP 305 >01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956, 6473206-6473539,6473629-6473833,6474927-6475033, 6475117-6475269 Length = 672 Score = 27.1 bits (57), Expect = 10.0 Identities = 13/41 (31%), Positives = 17/41 (41%) Frame = +2 Query: 98 SSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHG 220 S R+ +P P PPR R V S T+ + HG Sbjct: 132 SGRLAKPLSSCSAAATPPAPTPPRAARHDVLGSGTANYGHG 172 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,193,675 Number of Sequences: 37544 Number of extensions: 296414 Number of successful extensions: 1262 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1258 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1245816180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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