Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f16
(552 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0519 - 34481751-34482722 32 0.26
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 31 0.61
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 30 1.1
01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872 30 1.4
01_01_0219 + 1863478-1864041,1864459-1865109 29 1.9
07_03_1136 + 24218601-24218734,24218769-24219906 29 2.5
01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164... 29 2.5
10_08_0271 - 16382655-16384451 29 3.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.3
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 29 3.3
01_02_0108 - 11200964-11201338 29 3.3
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161... 28 4.3
08_01_0252 + 2060214-2060587,2060710-2061166 28 5.7
05_05_0298 - 23926266-23926442,23926573-23926632,23926822-239270... 28 5.7
05_04_0002 + 17031662-17032264 28 5.7
03_03_0142 + 14800317-14801240 28 5.7
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 27 7.5
10_01_0129 + 1535823-1537196 27 7.5
04_04_0545 + 26141335-26141793,26141883-26141981 27 7.5
04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099 27 7.5
01_07_0082 - 40965947-40967023 27 7.5
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 27 10.0
04_04_1383 - 33144047-33144603,33145554-33147129 27 10.0
04_04_1351 - 32827136-32827984 27 10.0
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 27 10.0
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 27 10.0
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 27 10.0
>03_06_0519 - 34481751-34482722
Length = 323
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 105 GCSAPPVVATLTSSIPNRSHRGPGAVPFHQAQRALSATDKEMSRK 239
G APP ++ T + RS R GA P H A+ S+T+ S +
Sbjct: 28 GAEAPPATSSSTPTTARRSKRLAGAPPDHPAEAGPSSTNARRSSR 72
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 31.1 bits (67), Expect = 0.61
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 158 EPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATN 268
+ P+ G A P A STF H Q P ATN +++ N
Sbjct: 586 QAPQAG--APYPQAASTFPHSQASHPAATNPSTIPQN 620
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 158 EPPRTGRRAVPPS--ATSTFSHGQGDEPKATNGTSVATNGQST 280
+ PR+G ++ S A ST +HGQ + G + +N QST
Sbjct: 410 QSPRSGGTSLNSSGFAASTVNHGQSSVVRTQGGNGIPSNNQST 452
>01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872
Length = 686
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 89 ARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSH 217
A L +R RPP GG T + + P+ P AT F H
Sbjct: 171 ASLYTRAPRPPRGGKTYLLTAAPQCPYPDASLAAALATGLFDH 213
>01_01_0219 + 1863478-1864041,1864459-1865109
Length = 404
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 207 VLVALGGTARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPT 70
+L +L ++ RP++ S S VWPPP ST +P PT
Sbjct: 46 MLHSLVPSSSRPIMQPSPSPETPCVWPPPLPSSTPTPAPSPPSTPT 91
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -1
Query: 192 GGTARRPVLGGSGSESKMLVWPPPGGRSTLLDR 94
GG A R VLGG G L PP GGR L R
Sbjct: 140 GGGAPRRVLGGGGGGGA-LARPPGGGRGGALGR 171
>01_07_0046 -
40714701-40714763,40715266-40715343,40716398-40716462,
40717075-40717201,40717279-40717319,40717621-40717690,
40718070-40718191,40719047-40719107,40719182-40719292,
40719387-40719461,40719815-40719842,40719929-40719978,
40720228-40720290,40720385-40720426,40720562-40720631,
40720663-40720713,40721857-40722041,40722374-40722775
Length = 567
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = -1
Query: 195 LGGTARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPTLNGVEVI 49
LG TAR P S + + +V PPP RST R A + RPT V I
Sbjct: 124 LGRTARSP----SPALGRNIVEPPPTVRSTSAGRPAVASRPTTTVVPPI 168
>10_08_0271 - 16382655-16384451
Length = 598
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 10/71 (14%)
Frame = +2
Query: 92 RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVP----------PSATSTFSHGQGDEPKA 241
R +S V R GGG T+ P PP G A P PS +T H + A
Sbjct: 64 RKASPVDRGGGGGGTSFSGHSPSPPDAGGSAKPESPHDSGVKAPSELTTVEHTKQPSEPA 123
Query: 242 TNGTSVATNGQ 274
+ GT G+
Sbjct: 124 STGTESDDGGK 134
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 116 PPGGGHTNIFDSEPEPPRTGRRAV-PPSATSTFSHGQGDEPKATNGTSVATNGQSTP 283
PP G N F + P PP R + P+ +T S G P + TNG P
Sbjct: 653 PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVP 709
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 155 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNG 271
P PP A PP S + +G G P G +VA G
Sbjct: 167 PPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGG 205
>01_02_0108 - 11200964-11201338
Length = 124
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +2
Query: 50 MTSTPFNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST 208
M ST NVGL+ A +S ++RP G +F P R G AV S +T
Sbjct: 1 MASTLTNVGLSTPAAAASSLVRPVAGAGRVVF---PRVGRGGFAAVRASGPAT 50
>04_03_1049 +
22015053-22015083,22015770-22015885,22016013-22016108,
22016229-22016285,22016468-22016620,22016754-22016838,
22017097-22017187,22017324-22017488,22017813-22017932,
22018020-22018104,22018234-22018402,22019055-22019173,
22019250-22019440,22019746-22019957,22020905-22021500,
22022538-22022658,22023439-22023868,22024412-22024797,
22024976-22025071,22025380-22025432,22026915-22027061,
22027139-22027309,22027880-22027962,22028049-22028247,
22028668-22028789,22029752-22029818,22029960-22030010,
22030768-22031001,22031263-22031451,22032455-22032646,
22032742-22032936
Length = 1673
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 151 RTGATEDRAPCRSTKRN---EHFQPRTRR*AESDQRHFSSDQRSVHS*GEPGATDPAGG 318
RTG E R T+R E +P R A + +R +++QR + + G +DPAGG
Sbjct: 575 RTGGVERRRREPVTRRRGGKERRRPSWRALAANRRRGEAANQRRGEAATQRGGSDPAGG 633
>08_01_0252 + 2060214-2060587,2060710-2061166
Length = 276
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 457 VWFGLPQARGEPAGGDPDA 401
V++GL Q RG+ +GGD DA
Sbjct: 85 VFYGLAQCRGDVSGGDCDA 103
>05_05_0298 -
23926266-23926442,23926573-23926632,23926822-23927029,
23927471-23927703,23928806-23928860,23928943-23929649
Length = 479
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 452 PHPLAVSLYNQIFDFHLTHIMSQICIEAKFFLR 550
PHP ++L++ D H H++ ++C + F R
Sbjct: 96 PHPNVINLHDVYEDVHGVHLVLELCSGGELFDR 128
>05_04_0002 + 17031662-17032264
Length = 200
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 170 TGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTP 283
+G+R P S+TST + G GD+ + +S +++ ++P
Sbjct: 54 SGKRGPPTSSTSTMASG-GDDDEEEGASSSSSSADTSP 90
>03_03_0142 + 14800317-14801240
Length = 307
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 155 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSV 259
P P R G A P+A +T G E +T GTS+
Sbjct: 198 PPPARKGLSACNPAAATTTPGGAAAESASTAGTSL 232
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 96 YQAGCSAPPVVATLTSSIPNRSHRGPGAVPFHQAQRALS 212
Y+A CSA P + T +++ R+ R AV R+LS
Sbjct: 33 YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLS 71
>10_01_0129 + 1535823-1537196
Length = 457
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 186 TARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPTLNG 61
+ RR GG G PPGG S L R S RP +G
Sbjct: 5 SGRRLAAGGGGGGGGAPRGSPPGGGSPLNSSRRSSRRPRPSG 46
>04_04_0545 + 26141335-26141793,26141883-26141981
Length = 185
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 77 LNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPS 196
L GA+ SSR PPG G + PP TGRR + S
Sbjct: 14 LLSGAQPSSRRATPPGNGQRS-----RRPPATGRRRLAAS 48
>04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099
Length = 292
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 71 VGLNDGARLSSRVLRPPGGGHTNI--FDSEPEPPRTGRRAVPPSATSTFSHG 220
VGL+DG + SRVL G H+ + + EP +GR V A HG
Sbjct: 169 VGLDDGTVIRSRVLVGCDGVHSAVARWLGMAEPASSGRSCVRGLAVYPGGHG 220
>01_07_0082 - 40965947-40967023
Length = 358
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 116 PPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNG 250
PP G+ + ++P PP+ G PP + + G G P+A G
Sbjct: 257 PPQYGYG--YPAQPPPPQAGYGYPPPPPQAGYGGGYGYPPQAGYG 299
>06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 117 PPVVATLTSSIPNRSHRGPGAVPF 188
PP A + IP++S GPG+V +
Sbjct: 1211 PPTKALFQNGIPDQSSNGPGSVSY 1234
>04_04_1383 - 33144047-33144603,33145554-33147129
Length = 710
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 104 RVLRPPGGGHTNIFDSEPE-PPRTGRRAVPPSAT 202
+ +RPP S+P PPR RAVPP AT
Sbjct: 38 QAVRPPPAAVGGGSHSQPTFPPRAPVRAVPPPAT 71
>04_04_1351 - 32827136-32827984
Length = 282
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 122 GGGHTNIFDSEPEPPRT--GRRAVPPSATST 208
GG + P PP+ GR+A PPS T T
Sbjct: 161 GGSGGGGYSPSPSPPKRHGGRKACPPSPTPT 191
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 149 SEPEPPRTGRRAVPPSATSTFSHGQ--GDEPKATNGTSVATNG 271
S P PP + VPPS T+ + GQ EP+ G + G
Sbjct: 94 SPPPPPPSSPPPVPPSPTAAPTTGQSWNSEPERKEGATATDVG 136
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 122 GGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKA-TNGTSVAT-NGQSTP 283
GGG+T P P +G P ++ D P + ++G+S T G STP
Sbjct: 250 GGGYTPTPSDTPPSPSSGSSPTTPGGGGGYTPTPSDTPPSPSSGSSRTTPGGCSTP 305
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 98 SSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHG 220
S R+ +P P PPR R V S T+ + HG
Sbjct: 132 SGRLAKPLSSCSAAATPPAPTPPRAARHDVLGSGTANYGHG 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,193,675
Number of Sequences: 37544
Number of extensions: 296414
Number of successful extensions: 1262
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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