Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov12f15
(517 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0125 - 1317328-1318049,1318061-1319035,1320994-1321143,132... 37 0.008
11_08_0010 + 27605105-27607919,27607954-27608013,27608110-27608495 34 0.078
04_01_0112 + 1151242-1151272,1151722-1151928,1151996-1152318,115... 34 0.078
01_05_0611 - 23644692-23646439,23647011-23647551,23648851-236489... 32 0.24
01_05_0610 - 23636097-23638958 31 0.42
02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,527... 30 1.3
11_08_0009 + 27600881-27602592,27602665-27603008,27603159-276038... 29 1.7
07_01_0332 - 2345980-2346566,2346715-2348262,2349214-2350279 29 1.7
06_03_0588 + 22567820-22570802,22570917-22571269 29 2.2
04_04_0881 + 29055724-29059197 29 2.2
11_06_0129 - 20397179-20397537,20397749-20400497 29 2.9
08_02_1435 + 27079184-27082006 29 2.9
08_01_0917 + 9033451-9036136,9036373-9036722 29 2.9
01_01_0898 + 7078900-7079079,7080269-7080301,7080480-7080653,708... 29 2.9
11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008 28 3.9
07_03_0987 - 23155134-23155693,23155781-23157023 28 3.9
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 28 3.9
02_02_0030 - 6207784-6208154,6208286-6211310 28 3.9
12_01_0022 + 165056-165408,165477-165624,166248-166248,166305-16... 28 5.1
11_01_0706 + 5811722-5814025 28 5.1
02_02_0032 - 6227556-6227926,6228322-6231085 28 5.1
02_01_0061 + 442288-442411,442445-445498,445630-446000 28 5.1
01_01_0498 - 3666752-3667072,3667670-3668061,3668571-3668912,366... 28 5.1
11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415 27 6.8
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 27 6.8
01_05_0608 - 23628100-23631486 27 6.8
11_08_0024 + 27747449-27747940,27748141-27750177 27 8.9
11_08_0011 + 27612206-27615110,27615211-27615538,27615989-276160... 27 8.9
07_03_0305 - 16475127-16476017,16476058-16478067 27 8.9
07_01_0234 + 1715338-1718233,1718351-1718760 27 8.9
04_04_1371 + 32995337-32995358,32995745-32995822,32995876-329960... 27 8.9
02_01_0430 - 3136181-3136248,3136544-3136923,3137545-3137963 27 8.9
01_01_0426 + 3234987-3235935,3236744-3236782,3237044-3237409,324... 27 8.9
>04_01_0125 -
1317328-1318049,1318061-1319035,1320994-1321143,
1322242-1322546,1323447-1323565
Length = 756
Score = 37.1 bits (82), Expect = 0.008
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 294 YPGDPETRLLGFITSL-KITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGK 470
Y G P ++G S+ +++G +P + LLQ L+ LNL++N++ F YL +
Sbjct: 558 YMGMPLELMIGIDLSMNRLSGPIPSSVGFLLQ----LKSLNLSHNKLVGSIPDTFMYLHE 613
Query: 471 LETIDLSH 494
+E++DLSH
Sbjct: 614 MESMDLSH 621
>11_08_0010 + 27605105-27607919,27607954-27608013,27608110-27608495
Length = 1086
Score = 33.9 bits (74), Expect = 0.078
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 327 FITSLKITGQMPKT--NLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
F+ S K++G +PK NLT +L+ L L+NNQ+ ++L L +DLSH
Sbjct: 546 FLQSNKLSGSIPKDMGNLT------KLEHLVLSNNQLSSTVPPSIFHLSSLIQLDLSH 597
>04_01_0112 +
1151242-1151272,1151722-1151928,1151996-1152318,
1152552-1153793
Length = 600
Score = 33.9 bits (74), Expect = 0.078
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 294 YPGDPETRLLGFITSL-KITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGK 470
Y G+P + G S+ +++G +P L + +L+ LNL++NQ+ F Y+
Sbjct: 411 YMGEPLVLMTGIDLSMNQLSGAIPPP----LGFLRQLKSLNLSHNQLVGPIPETFMYMQD 466
Query: 471 LETIDLSH 494
+E++DLS+
Sbjct: 467 MESLDLSY 474
>01_05_0611 -
23644692-23646439,23647011-23647551,23648851-23648952,
23649244-23649441
Length = 862
Score = 32.3 bits (70), Expect = 0.24
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +3
Query: 255 TVTVTLKNVAEDYYPGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIE 434
++++++K+ +Y +L ++ TG +P+ LTLL+ LQ LNL+ NQ+
Sbjct: 647 SISMSIKDQELNYTFQSTNNIMLIDMSYNSFTGPIPR-ELTLLK---GLQSLNLSGNQLS 702
Query: 435 RIAGSPFYYLGKLETIDLSH 494
+ L +LE++DLS+
Sbjct: 703 GTIPNDIGILRRLESLDLSY 722
>01_05_0610 - 23636097-23638958
Length = 953
Score = 31.5 bits (68), Expect = 0.42
Identities = 24/87 (27%), Positives = 43/87 (49%)
Frame = +3
Query: 234 EAANFPVTVTVTLKNVAEDYYPGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLN 413
+ N+ ++V K E Y G+ + ++S +TG++P+ ++L+ T N
Sbjct: 737 DMVNYIENISVVTKG-QERLYTGEIVYMVNIDLSSNNLTGEIPEEIISLVALTNLNLSWN 795
Query: 414 LTNNQIERIAGSPFYYLGKLETIDLSH 494
+ QI GS L +LE++DLSH
Sbjct: 796 SLSGQIPEKIGS----LSQLESLDLSH 818
>02_01_0706 +
5270233-5270326,5270767-5270914,5271018-5271089,
5271153-5271263,5271363-5271434,5271533-5271604,
5272126-5272197,5272281-5272346,5272426-5272491,
5272601-5272971,5273203-5273456,5273886-5274157,
5274333-5274474,5275174-5275313,5275381-5275537,
5275797-5275965,5276048-5276088
Length = 772
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 306 PETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETID 485
P L F + + G +P + L + + L+ LNL++N++ I G F + L T+D
Sbjct: 137 PSVEYLNFAAN-QFEGSIPPS----LPWLHTLKYLNLSHNKLSGIIGDVFVNMESLGTMD 191
Query: 486 LS 491
LS
Sbjct: 192 LS 193
>11_08_0009 +
27600881-27602592,27602665-27603008,27603159-27603806,
27603908-27604296
Length = 1030
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 330 ITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
++S TG +P + L Y LNL+ N + F L LET+DLSH
Sbjct: 601 LSSNHFTGILPDSIAQLQMIAY----LNLSVNSFQNSIPDSFRVLTSLETLDLSH 651
>07_01_0332 - 2345980-2346566,2346715-2348262,2349214-2350279
Length = 1066
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 345 ITGQMPKTNLTLLQYTYRLQDLNLTNNQI--ERIAGSPFYYLGKLETIDLSHKQ 500
+T PK L + + LNL+NN++ I G G+L+ +DLSH Q
Sbjct: 251 LTSTTPKELKFLADISETVLYLNLSNNKLTGSLIDGVELSTFGRLKVLDLSHNQ 304
>06_03_0588 + 22567820-22570802,22570917-22571269
Length = 1111
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 342 KITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
+++GQ+P T L+Q L +LNL N + ++ +L+T++L+H
Sbjct: 524 RLSGQIPGTIGNLVQ----LNELNLDGNNLSGSIPESIHHCAQLKTLNLAH 570
>04_04_0881 + 29055724-29059197
Length = 1157
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 408 LNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
L+L +NQ+ F LG+LE +DLSH Q
Sbjct: 614 LDLRSNQLTGPIPGDFARLGELEELDLSHNQ 644
>11_06_0129 - 20397179-20397537,20397749-20400497
Length = 1035
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 336 SLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
S K++G++P T L LQDL L NN + L L+T+D S
Sbjct: 548 SNKLSGEIPST----LGQCQNLQDLTLQNNMLNGNIPEQLSQLKSLQTLDFS 595
>08_02_1435 + 27079184-27082006
Length = 940
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 345 ITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
+TG++P L YRL LNL+ N IE L LE++DLS
Sbjct: 766 LTGEIPSEIGNL----YRLASLNLSRNHIEGSIPETIGNLAWLESLDLS 810
>08_01_0917 + 9033451-9036136,9036373-9036722
Length = 1011
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 327 FITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
+++ +ITGQ+P++ L +L L L+NN ++ S L KL+ +DLS
Sbjct: 426 YVSHNRITGQIPQS----LGNASQLSSLTLSNNFLDGSIPSSLGNLTKLQYLDLS 476
>01_01_0898 +
7078900-7079079,7080269-7080301,7080480-7080653,
7080866-7083890,7084253-7084596
Length = 1251
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 399 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
L+ + L++NQ+ + F+ LGKL ++LSH
Sbjct: 731 LEHIMLSHNQLNSTIPASFFNLGKLVRLNLSH 762
>11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008
Length = 1058
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 330 ITSLKITGQMPKT--NLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
I++ + G +P + L LL Y LNL+ N + F L LET+DLSH
Sbjct: 566 ISANNLVGSLPTSWGQLQLLSY------LNLSQNTFNDLIPDSFKGLVNLETLDLSH 616
>07_03_0987 - 23155134-23155693,23155781-23157023
Length = 600
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = -3
Query: 203 DVGSTLDFEGALS*AVDVLTRAVAGYQYQAGQENQKLITFRHLSTVRSERNSV*EAQHIR 24
D G L E L + +VL + V+G Y+A E+ ++ + LS ++ S +H+R
Sbjct: 312 DGGEELRLESLLKASAEVLGKGVSGSTYKAVLEDGIVVAVKRLSALQFPGRSKAFDRHMR 371
Query: 23 RNYKVR 6
++R
Sbjct: 372 LAGRLR 377
>03_05_0710 +
27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 19 LRRICCASHTEFRSERTVLRWRK 87
L +CC S EF + LRW+K
Sbjct: 435 LELLCCISRAEFSDMKAYLRWQK 457
>02_02_0030 - 6207784-6208154,6208286-6211310
Length = 1131
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +3
Query: 315 RLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
++LG +++ + G++P++ L Q T+ LQ + L NN++E + F L +L+T+DLS
Sbjct: 153 KVLG-LSNNSLQGEIPQS---LTQCTH-LQQVILYNNKLEGSIPTGFGTLPELKTLDLS 206
>12_01_0022 +
165056-165408,165477-165624,166248-166248,166305-166602,
166819-167387,167554-168377
Length = 730
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 277 MSPKITIQETQKLDSWVSLLL*KLQGKCRKRI*HY 381
MS KIT ++ +K+ SW S+ + +C++ + H+
Sbjct: 331 MSKKITAKQNKKIHSWGSIARYCISHECKEDVLHH 365
>11_01_0706 + 5811722-5814025
Length = 767
Score = 27.9 bits (59), Expect = 5.1
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 TVTLKNVAEDYYPGDPETRLLGFITSLK-ITGQMPKTNLTLLQYTYRLQDLNLTNNQIER 437
+V +K+ + Y GD ++G SL +TG +P +T L+ RL LNL+ NQ+
Sbjct: 551 SVVMKHQEQQY--GDSILDVVGIDLSLNSLTGGIPD-EITSLK---RLLSLNLSWNQLSG 604
Query: 438 IAGSPFYYLGKLETIDLSHKQ 500
+ LE++DLS +
Sbjct: 605 EIVEKIGAMNSLESLDLSRNK 625
>02_02_0032 - 6227556-6227926,6228322-6231085
Length = 1044
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 345 ITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
+ G++P + L Q T+ LQ + L+NN++E + F L +L+T+DLS+
Sbjct: 162 LQGEIPPS---LTQCTH-LQQVMLSNNKLEGEIPTGFGTLRELKTLDLSN 207
>02_01_0061 + 442288-442411,442445-445498,445630-446000
Length = 1182
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +3
Query: 315 RLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
++LG +++ G++P + L Q T RLQ + L NN++E + F L +L+T+DLS+
Sbjct: 204 QVLG-LSNNSFEGEIPPS---LTQCT-RLQQVILYNNKLEGSIPTRFGTLPELKTLDLSN 258
>01_01_0498 -
3666752-3667072,3667670-3668061,3668571-3668912,
3669982-3670131,3670211-3670308,3670430-3670489,
3670605-3670676,3670766-3670909,3671003-3671074,
3671170-3671302,3671649-3671751
Length = 628
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 324 GFITSLKITGQMPKTNLTL-LQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
G++++L + Q L+ + RLQ + L NN I + LG L+T+D+S Q
Sbjct: 74 GYVSALGLPSQSLSGKLSPGIGNLTRLQSVLLQNNAISGTIPASIGRLGMLQTLDMSDNQ 133
>11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415
Length = 1490
Score = 27.5 bits (58), Expect = 6.8
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +3
Query: 192 TTNVRGIRLPNECLEAANFPVTVTVTLKNVAEDYYP---GDPETRLLGFITSLKITGQMP 362
T N+ G +P+E + + V+ KN E P G + + S +++G++P
Sbjct: 493 TNNLSG-PIPSELFNIQTLSIMINVS-KNNLEGSIPQEIGHLKNLVEFHAESNRLSGKIP 550
Query: 363 KT--NLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
T + LL+Y Y LQ+ NL + I G L LET+DLS
Sbjct: 551 NTLGDCQLLRYLY-LQN-NLLSGSIPSALGQ----LKGLETLDLS 589
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 172 APSKSSVLPTSEEYASPMNV*RQPTSPSLLP*RLKMSP 285
+P+ PTS Y SP + PTSPS P K SP
Sbjct: 1719 SPTSPGYSPTSPSY-SPTSPNYSPTSPSYNPSSAKYSP 1755
>01_05_0608 - 23628100-23631486
Length = 1128
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 342 KITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
K+TG +P+ L+ T +LNL++NQ L +LE++DLS+ +
Sbjct: 942 KLTGHIPEEIHLLIGLT----NLNLSSNQFSGTIHDQIGDLKQLESLDLSYNE 990
>11_08_0024 + 27747449-27747940,27748141-27750177
Length = 842
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 396 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
+L+ L+L++NQ+ ++L +L +DLSH
Sbjct: 498 KLEYLDLSDNQLASTVPPSLFHLDRLVKLDLSH 530
>11_08_0011 +
27612206-27615110,27615211-27615538,27615989-27616059,
27616962-27617118,27617676-27617709
Length = 1164
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 408 LNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
LNL+ N I+ + F L L+T+DLSH +
Sbjct: 641 LNLSTNSIDGSIPNSFGNLTGLQTLDLSHNR 671
>07_03_0305 - 16475127-16476017,16476058-16478067
Length = 966
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +3
Query: 345 ITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
+TG +P+ ++++L L++LNL+ N + + + L +E++DLSH +
Sbjct: 785 LTGHIPE-DISMLT---ALKNLNLSWNHLSGVIPTNIGALQSIESLDLSHNE 832
>07_01_0234 + 1715338-1718233,1718351-1718760
Length = 1101
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 342 KITGQMPKT--NLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
K++G +P NLT LQY ++L+NNQ + ++L L I++SH
Sbjct: 541 KLSGVLPLGLGNLTNLQY------ISLSNNQFFSVIPPSIFHLNYLLVINMSH 587
>04_04_1371 +
32995337-32995358,32995745-32995822,32995876-32996019,
32997595-32997930,32998014-32998166,32998286-32998501,
32998600-33000695
Length = 1014
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 399 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
++ LNL+NN + F + ++E++DLSH +
Sbjct: 859 IKSLNLSNNFFTGQIPASFANMSEIESLDLSHNE 892
>02_01_0430 - 3136181-3136248,3136544-3136923,3137545-3137963
Length = 288
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 321 LGFITSLKITGQMPKTNLTLLQYTY----RLQDLNLTNNQIERIAGSPFYYLGKLETIDL 488
LG TSLKI G + + + RL++L L NN++ R+ S L+ I+L
Sbjct: 9 LGNCTSLKIIGIKHNNFIGDIPGSIGQLNRLEELQLDNNRMSRVFPSSLSNFTSLKIINL 68
Query: 489 SH 494
H
Sbjct: 69 KH 70
>01_01_0426 +
3234987-3235935,3236744-3236782,3237044-3237409,
3240871-3242315
Length = 932
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 330 ITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSP-FYYLGKLETIDLS 491
++S +ITG +P+ TY+L LNL++N + SP + L +DLS
Sbjct: 593 LSSNQITGAIPRWIWE--NRTYQLNSLNLSHNMFTTVEQSPSLVNIAYLTYLDLS 645
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,163,260
Number of Sequences: 37544
Number of extensions: 260671
Number of successful extensions: 837
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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