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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f15
         (517 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g06970.1 68418.m00789 expressed protein                             32   0.26 
At5g01890.1 68418.m00108 leucine-rich repeat transmembrane prote...    32   0.26 
At4g04220.1 68417.m00598 disease resistance family protein conta...    32   0.26 
At1g61190.1 68414.m06895 disease resistance protein (CC-NBS-LRR ...    31   0.46 
At2g41820.1 68415.m05168 leucine-rich repeat transmembrane prote...    31   0.61 
At4g08850.2 68417.m01455 leucine-rich repeat family protein / pr...    29   1.4  
At4g08850.1 68417.m01454 leucine-rich repeat family protein / pr...    29   1.4  
At1g61300.1 68414.m06909 disease resistance protein (NBS-LRR cla...    29   1.4  
At1g58190.1 68414.m06605 leucine-rich repeat family protein cont...    29   1.4  
At2g23300.1 68415.m02781 leucine-rich repeat transmembrane prote...    29   1.9  
At5g07280.1 68418.m00830 leucine-rich repeat protein kinase, put...    29   2.5  
At1g71400.1 68414.m08246 disease resistance family protein / LRR...    29   2.5  
At1g61310.1 68414.m06910 disease resistance protein (CC-NBS-LRR ...    28   3.2  
At3g13065.1 68416.m01632 leucine-rich repeat transmembrane prote...    28   4.3  
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put...    28   4.3  
At4g20140.1 68417.m02947 leucine-rich repeat transmembrane prote...    27   5.7  
At3g53240.1 68416.m05868 leucine-rich repeat family protein cont...    27   5.7  
At2g34930.1 68415.m04288 disease resistance family protein conta...    27   5.7  
At1g53730.1 68414.m06114 leucine-rich repeat transmembrane prote...    27   5.7  
At1g07390.1 68414.m00788 leucine-rich repeat family protein cont...    27   5.7  
At5g45780.1 68418.m05630 leucine-rich repeat transmembrane prote...    27   7.5  
At5g44700.1 68418.m05477 leucine-rich repeat transmembrane prote...    27   7.5  
At5g37450.1 68418.m04507 leucine-rich repeat transmembrane prote...    27   7.5  
At3g25560.1 68416.m03178 protein kinase family protein contains ...    27   7.5  
At1g47890.1 68414.m05333 disease resistance family protein conta...    27   7.5  
At4g20940.1 68417.m03034 leucine-rich repeat family protein cont...    27   9.9  
At3g05370.1 68416.m00586 disease resistance family protein conta...    27   9.9  
At1g78980.1 68414.m09209 leucine-rich repeat transmembrane prote...    27   9.9  

>At5g06970.1 68418.m00789 expressed protein
          Length = 1101

 Score = 31.9 bits (69), Expect = 0.26
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 19  LRRICCASHTEFRSERTVLRWRK 87
           L  +CC S TEF  ++  LRW+K
Sbjct: 298 LELLCCVSRTEFSDKKAYLRWQK 320


>At5g01890.1 68418.m00108 leucine-rich repeat transmembrane protein
           kinase, putative leucine-rich receptor-like protein
           (LRPKm1) - Malus domestica, EMBL:AF053127
          Length = 967

 Score = 31.9 bits (69), Expect = 0.26
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +3

Query: 342 KITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
           K+TG +P +    L Y   L  LNL++NQ+        ++L  L+++D SH
Sbjct: 152 KLTGSIPVS----LSYCSTLTHLNLSSNQLSGRLPRDIWFLKSLKSLDFSH 198


>At4g04220.1 68417.m00598 disease resistance family protein contains
           leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Hcr2-2A [Lycopersicon
           pimpinellifolium] gi|3894389|gb|AAC78594
          Length = 811

 Score = 31.9 bits (69), Expect = 0.26
 Identities = 20/51 (39%), Positives = 32/51 (62%)
 Frame = +3

Query: 342 KITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
           K+ G++P T+L  L+    L+ LNL+NN+   +    F  L K+E++DLSH
Sbjct: 653 KLHGEIP-TSLGNLK---SLKVLNLSNNEFSGLIPQSFGDLEKVESLDLSH 699


>At1g61190.1 68414.m06895 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 967

 Score = 31.1 bits (67), Expect = 0.46
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 399 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQD 503
           L  L L +NQ++ ++G    Y+ KL  +DLSH  D
Sbjct: 539 LTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSHNPD 573


>At2g41820.1 68415.m05168 leucine-rich repeat transmembrane protein
           kinase, putative 
          Length = 890

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +3

Query: 327 FITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
           F+  L ++G   + N+TL+     L+ L+L+ N       + F  L +LE +DLS
Sbjct: 64  FVEMLDLSGLQLRGNVTLISDLRSLKHLDLSGNNFNGRIPTSFGNLSELEFLDLS 118


>At4g08850.2 68417.m01455 leucine-rich repeat family protein /
           protein kinase family protein contains Pfam domains
           PF00560: Leucine Rich Repeat and PF00069: Protein kinase
           domain
          Length = 1009

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 396 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
           +LQ L+L+ NQ++    S F  L  LE +DLSH
Sbjct: 599 QLQMLDLSYNQLDGEISSQFRSLQNLERLDLSH 631


>At4g08850.1 68417.m01454 leucine-rich repeat family protein /
           protein kinase family protein contains Pfam domains
           PF00560: Leucine Rich Repeat and PF00069: Protein kinase
           domain
          Length = 1045

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 396 RLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
           +LQ L+L+ NQ++    S F  L  LE +DLSH
Sbjct: 599 QLQMLDLSYNQLDGEISSQFRSLQNLERLDLSH 631


>At1g61300.1 68414.m06909 disease resistance protein (NBS-LRR
           class), putative domain signature NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 762

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 399 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQD 503
           L  L L +NQ++ ++G    Y+ KL  +DLS+ +D
Sbjct: 424 LTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSYNRD 458


>At1g58190.1 68414.m06605 leucine-rich repeat family protein contains
            leucine rich-repeat (LRR) domains Pfam:PF00560,
            INTERPRO:IPR001611; contains similarity to Cf-2.2
            [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
          Length = 1784

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 19/54 (35%), Positives = 33/54 (61%)
 Frame = +3

Query: 330  ITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
            ++S +++G +PK  L  LQ   R++ LNL++N +  +    F  L  +E+IDLS
Sbjct: 1604 LSSNELSGDIPK-ELGDLQ---RIRALNLSHNSLSGLIPQSFSNLTDIESIDLS 1653



 Score = 29.1 bits (62), Expect = 1.9
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 288 DYYPGDPETRLLGF-ITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYL 464
           D Y G+    + G   +S ++ G++P+     L    R++ LNL++N +  +    F  L
Sbjct: 738 DSYMGESFKFMFGLDFSSNELIGEIPRE----LGDFQRIRALNLSHNSLSGLVPESFSNL 793

Query: 465 GKLETIDLS 491
             +E+IDLS
Sbjct: 794 TDIESIDLS 802


>At2g23300.1 68415.m02781 leucine-rich repeat transmembrane protein
           kinase, putative 
          Length = 773

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +3

Query: 345 ITGQMPKTNL-----TLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
           +T  +P +NL     + L +   LQ LNL+NN +       F+   KL  +DLS+
Sbjct: 78  VTLSLPNSNLVGSIPSDLGFLQNLQSLNLSNNSLNGSLPVEFFAADKLRFLDLSN 132


>At5g07280.1 68418.m00830 leucine-rich repeat protein kinase,
           putative / extra sporogenous cells (ESP) identical to
           extra sporogenous cells [Arabidopsis thaliana]
           gi|23304947|emb|CAD42912; contains Pfam domains PF00560:
           Leucine Rich Repeat and PF00069: Protein kinase domain
          Length = 1192

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 345 ITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
           +TG +PK     +  + +LQ LNL NNQ+       F  LG L  ++L+
Sbjct: 640 LTGSIPKE----MGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLT 684


>At1g71400.1 68414.m08246 disease resistance family protein / LRR
           family protein contains leucine rich-repeat domains
           Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D
           [Lycopersicon esculentum] gi|3894393|gb|AAC78596
          Length = 847

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +3

Query: 342 KITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
           KI G +P++    L Y   L+ LNL+ N    +       L KLET+D+S  +
Sbjct: 669 KINGNIPES----LGYLKELRVLNLSGNAFTSVIPRFLANLTKLETLDISRNK 717


>At1g61310.1 68414.m06910 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 925

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 399 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQD 503
           L  L L +NQ++ ++G    Y+ KL  +DLS  +D
Sbjct: 548 LTTLFLQSNQLKNLSGEFIRYMQKLVVLDLSDNRD 582


>At3g13065.1 68416.m01632 leucine-rich repeat transmembrane protein
           kinase, putative leucine-rich repeat transmembrane
           protein kinase 1 GB:AAC27894 from [Zea mays]
          Length = 646

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 399 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
           L  LNL  N +       F  L KLETIDLS  Q
Sbjct: 102 LSYLNLGRNNLNGELSDMFQKLPKLETIDLSSNQ 135


>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
           putative (ERECTA) identical to uncharacterized receptor
           protein kinase ERECTA [Arabidopsis thaliana]
           gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
           Leucine Rich Repeat and PF00069: Protein kinase domain
          Length = 976

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 342 KITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
           K +G +P+    L   TY    LNL++N I+         +G L+T+DLS+ +
Sbjct: 390 KFSGTIPRAFQKLESMTY----LNLSSNNIKGPIPVELSRIGNLDTLDLSNNK 438


>At4g20140.1 68417.m02947 leucine-rich repeat transmembrane protein
           kinase, putative Cf-2.2, Lycopersicon pimpinellifolium,
           PIR:T10515
          Length = 1249

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +3

Query: 345 ITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
           +TG++P      L    +LQ L+L  NQ++ +       LG L+T+DLS
Sbjct: 251 LTGEIPSQ----LGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLS 295


>At3g53240.1 68416.m05868 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to Cf-2.1
           [Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
          Length = 891

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = +3

Query: 330 ITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQI-----ERIAGSPFYYLGKLETIDL 488
           + S++    +P+ NLT       LQ LNL++        ER  G     L  LET+DL
Sbjct: 29  LESIRPPDPLPQLNLTFFYPFEELQSLNLSSGYFKGWFDERKGGKGLGSLRNLETLDL 86


>At2g34930.1 68415.m04288 disease resistance family protein contains
           leucine rich-repeat domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Cf-2.1 [Lycopersicon
           pimpinellifolium] gi|1184075|gb|AAC15779
          Length = 905

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +3

Query: 345 ITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
           I+G++P+  L LL     L+ LNL+ N +          L +LET+DLS
Sbjct: 797 ISGEIPREILGLLY----LRILNLSRNSMAGSIPEKISELSRLETLDLS 841


>At1g53730.1 68414.m06114 leucine-rich repeat transmembrane protein
           kinase, putative similar to GI:3360289 from [Zea mays]
           (Plant Mol. Biol. 37 (5), 749-761 (1998))
          Length = 719

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 384 QYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
           Q+   LQ LNL NNQ    A      +  L+ ++L H Q
Sbjct: 115 QFPPNLQRLNLANNQFTGAASYSLSQITPLKYLNLGHNQ 153


>At1g07390.1 68414.m00788 leucine-rich repeat family protein contains
            leucine rich-repeat (LRR) domains Pfam:PF00560,
            INTERPRO:IPR001611; contains similarity to Hcr2-5D
            [Lycopersicon esculentum] gi|3894393|gb|AAC78596
          Length = 976

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
 Frame = +3

Query: 249  PVTVTVTLKNVAEDYYPGDPETRLLGF-ITSLKITGQMPKTNLTLLQYTYRLQDLNLTNN 425
            P TV   L     + Y GD    + G  ++S +++G++P   +  LQ    ++ LNL++N
Sbjct: 788  PATVVDFLTKSRYEAYQGDILRYMHGLDLSSNELSGEIP-IEIGDLQ---NIRSLNLSSN 843

Query: 426  QIERIAGSPFYYLGKLETIDLS-HKQDXAI 512
            ++          L  LE++DLS +K D +I
Sbjct: 844  RLTGSIPDSISKLKGLESLDLSNNKLDGSI 873


>At5g45780.1 68418.m05630 leucine-rich repeat transmembrane protein
           kinase, putative 
          Length = 614

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +3

Query: 324 GFITSLKITGQMPKTNL-TLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
           GF+ SL++  +     L T +     L  L L NNQ+     S    L +LET+DLS
Sbjct: 79  GFVVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLS 135


>At5g44700.1 68418.m05477 leucine-rich repeat transmembrane protein
           kinase, putative 
          Length = 1252

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +3

Query: 345 ITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
           +TG++P   +  LQ      DL+  NN   RI  S    L KLE++DLSH Q
Sbjct: 756 LTGEIP-VEIGQLQDLQSALDLSY-NNFTGRIP-STISTLPKLESLDLSHNQ 804


>At5g37450.1 68418.m04507 leucine-rich repeat transmembrane protein
           kinase, putative
          Length = 935

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
 Frame = +3

Query: 195 TNVRGIRLPNECLEAANFPVTVTVTLKNV-AEDYYPGDPETRLLGF--ITSLKITGQMPK 365
           +N  G  +P+      + P  V ++L+N   E   P   ++ +L +  I+S K+TG++PK
Sbjct: 183 SNFDGTEIPSSY---GSIPNLVKLSLRNCNLEGPIPDLSKSLVLYYLDISSNKLTGEIPK 239

Query: 366 TNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
                 +++  +  +NL NN +     S F  L +L+ + + +
Sbjct: 240 N-----KFSANITTINLYNNLLSGSIPSNFSGLPRLQRLQVQN 277


>At3g25560.1 68416.m03178 protein kinase family protein contains
           Prosite:PS00108: Serine/Threonine protein kinases
           active-site signature and PS00107: Protein kinases
           ATP-binding region signature
          Length = 635

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 330 ITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
           +++   TGQ+P T    L Y+  LQ L + NN +     S    + +L  +DLS+
Sbjct: 136 LSTNNFTGQIPFT----LSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTFLDLSY 186


>At1g47890.1 68414.m05333 disease resistance family protein contains
           leucine rich-repeat domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
           pimpinellifolium] gi|1184077|gb|AAC15780
          Length = 1019

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +3

Query: 330 ITSLKITGQMPKTNLTLLQYTYRLQDLNLTNNQIERIAGSPFYYLGKLETIDLSHKQ 500
           +++  + G +P    TL+     L DL+L NN +       F    KL ++D+SH +
Sbjct: 642 LSNNNLNGSLPWCLETLMS---SLSDLDLRNNSLSGSLPEIFMNATKLRSLDVSHNR 695


>At4g20940.1 68417.m03034 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to leucine-rich
           repeat receptor-like protein kinase INRPK1 [Ipomoea nil]
           gi|14495542|gb|AAB36558
          Length = 977

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 399 LQDLNLTNNQIERIAGSPFYYLGKLETIDLSH 494
           ++ LNL++NQ+E    S F     L+ +DLS+
Sbjct: 249 IKHLNLSHNQLEGSLTSGFQLFQNLKVLDLSY 280


>At3g05370.1 68416.m00586 disease resistance family protein contains
           leucine rich-repeat domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Cf-2 disease resistance
           protein GB:AAC15780 from [Lycopersicon pimpinellifolium]
          Length = 860

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 23/87 (26%), Positives = 44/87 (50%)
 Frame = +3

Query: 240 ANFPVTVTVTLKNVAEDYYPGDPETRLLGFITSLKITGQMPKTNLTLLQYTYRLQDLNLT 419
           A F  ++ +  K V  ++   + E +++ F +  + +G +P++ + LL+    L+ LNL+
Sbjct: 645 AFFVDSMEIVNKGVETEFKRINEENKVINF-SGNRFSGNIPES-IGLLK---ELRHLNLS 699

Query: 420 NNQIERIAGSPFYYLGKLETIDLSHKQ 500
           +N            L KLE +DLS  Q
Sbjct: 700 SNAFTGNIPQSLANLMKLEALDLSLNQ 726


>At1g78980.1 68414.m09209 leucine-rich repeat transmembrane protein
           kinase, putative similar to leucine-rich repeat
           transmembrane protein kinase 2 GI:3360291 from [Zea
           mays]
          Length = 693

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 399 LQDLNLTNNQIERIAGSPFYYLGKLETIDLS 491
           LQ +NL  N++       F  L KLET+D S
Sbjct: 140 LQSINLGQNKLNGELPDMFQKLSKLETLDFS 170


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,728,303
Number of Sequences: 28952
Number of extensions: 211111
Number of successful extensions: 650
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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