Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov12f14
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.4  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 331 TY*NWPVTCERISETAYFYCGSLSSQFTRLCNMGI 435
           T+ +W V    ++   Y +C SLS  F +   +GI
Sbjct: 56  TFKSWKVLYTSLTSFGYLFCASLS--FYKAFKIGI 88


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 184 SSRKHYLLYFNSNITLFISDKYI 116
           S++ +YL+  N N T  + +KY+
Sbjct: 14  STQPNYLILSNKNNTYLVLNKYL 36


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 375 GFTNPFACN 349
           GF NPF CN
Sbjct: 494 GFHNPFTCN 502


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 181 SRKHYLLYFNSNITLFISDKYIFNVLVDI 95
           SRK  + YF +++ L      + NVL DI
Sbjct: 54  SRKSRMNYFITHLALADLSVGLINVLTDI 82


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 284 KRGSWQALKPDPLENLHIETG 346
           K G W+ +  D  +N H+  G
Sbjct: 307 KEGGWKVVWDDTQKNTHMYKG 327


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 26  GKRNKDFIFKFPSF 67
           GKR+KD I+  P F
Sbjct: 73  GKRDKDAIYGHPLF 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,780
Number of Sequences: 336
Number of extensions: 2617
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)