BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov12f14 (548 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0488 + 3770410-3770774,3771197-3771284,3771383-3771466,377... 31 0.61 12_01_0401 + 3174256-3174326,3175138-3176822,3177049-3177269 28 5.6 04_01_0476 + 6215401-6217445,6217538-6217630,6218031-6218133,621... 27 7.5 04_01_0452 - 5859262-5859465,5859618-5859661,5859753-5859954,586... 27 9.9 >11_01_0488 + 3770410-3770774,3771197-3771284,3771383-3771466, 3772128-3772224,3772324-3772411,3772800-3772848, 3773044-3773238,3773713-3774159 Length = 470 Score = 31.1 bits (67), Expect = 0.61 Identities = 14/52 (26%), Positives = 23/52 (44%) Frame = +2 Query: 167 IMFSRTLNVSANICKPPLFNQVWLPPKNGRLIRNSFHNSKRGSWQALKPDPL 322 ++F L++SA + F+ W PPK +NS H + DP+ Sbjct: 245 VIFDYALHISARMVSAVAFDSYWSPPKPYERKQNSMHRFASPKSDEAEEDPI 296 >12_01_0401 + 3174256-3174326,3175138-3176822,3177049-3177269 Length = 658 Score = 27.9 bits (59), Expect = 5.6 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 Query: 152 IKIK*IMFSRTLNVSANICKPPLFNQVWLPPKN 250 I+ K ++ S++L + + C P F WL P N Sbjct: 548 IRSKRVLMSKSLEMRTDFCYPSQFLHSWLLPSN 580 >04_01_0476 + 6215401-6217445,6217538-6217630,6218031-6218133, 6218237-6218254 Length = 752 Score = 27.5 bits (58), Expect = 7.5 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +1 Query: 397 LSSQFTRLCNMGI*ESTGSRFFTTTKTRNVAD 492 +SSQ+ LC S GS+ TT+++NVA+ Sbjct: 334 MSSQWENLCKPLQSTSKGSKLIVTTRSQNVAN 365 >04_01_0452 - 5859262-5859465,5859618-5859661,5859753-5859954, 5860905-5860949 Length = 164 Score = 27.1 bits (57), Expect = 9.9 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -2 Query: 79 LQNEKRRKFENKILVSFSFSRTV 11 L+N+K + EN +L SFSRTV Sbjct: 33 LKNKKSARLENLVLARNSFSRTV 55 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,198,379 Number of Sequences: 37544 Number of extensions: 265704 Number of successful extensions: 577 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 567 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 577 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1233951264 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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